BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os08g0524200 Os08g0524200|AK058714
(390 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os08g0524200 DOMON related domain containing protein 662 0.0
Os03g0194900 DOMON related domain containing protein 313 1e-85
Os03g0194300 DOMON related domain containing protein 186 3e-47
Os09g0500900 Cytochrome b561 / ferric reductase transmembra... 159 3e-39
Os01g0680900 DOMON related domain containing protein 137 2e-32
Os08g0524400 DOMON related domain containing protein 130 1e-30
Os05g0556400 DOMON related domain containing protein 127 2e-29
Os05g0237200 DOMON related domain containing protein 126 3e-29
Os01g0895300 Cytochrome b561 / ferric reductase transmembra... 119 5e-27
Os01g0895200 DOMON related domain containing protein 112 5e-25
Os03g0194600 DOMON related domain containing protein 80 3e-15
Os08g0335600 DOMON related domain containing protein 77 3e-14
AK105009 77 3e-14
>Os08g0524200 DOMON related domain containing protein
Length = 390
Score = 662 bits (1709), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 332/362 (91%), Positives = 332/362 (91%)
Query: 29 ERFSSNRVYAACSDLPHLGASVHWTYDXXXXXXXXXXXXXXXXXXGGWVAWGLNPTGGGM 88
ERFSSNRVYAACSDLPHLGASVHWTYD GGWVAWGLNPTGGGM
Sbjct: 29 ERFSSNRVYAACSDLPHLGASVHWTYDAAASASLSVAFVAAPPSPGGWVAWGLNPTGGGM 88
Query: 89 AGTQALVALPKGGGGGYEVQTFDIEGYSLSAPGKLKYPATDLAAEVAADGRVSVFGKLAL 148
AGTQALVALPKGGGGGYEVQTFDIEGYSLSAPGKLKYPATDLAAEVAADGRVSVFGKLAL
Sbjct: 89 AGTQALVALPKGGGGGYEVQTFDIEGYSLSAPGKLKYPATDLAAEVAADGRVSVFGKLAL 148
Query: 149 QNGTAEVNQVWQVGPVSSGSMVPHAMSSDNKAAMGKLNLLXXXXXXXXXXXXNLRKKNTH 208
QNGTAEVNQVWQVGPVSSGSMVPHAMSSDNKAAMGKLNLL NLRKKNTH
Sbjct: 149 QNGTAEVNQVWQVGPVSSGSMVPHAMSSDNKAAMGKLNLLTGAATSSGGGGSNLRKKNTH 208
Query: 209 GILNAVSWGLLLPMGAIFARYLKTFKSADPAWFYLHVACQLIGYGVGVSGWATGIHLGNL 268
GILNAVSWGLLLPMGAIFARYLKTFKSADPAWFYLHVACQLIGYGVGVSGWATGIHLGNL
Sbjct: 209 GILNAVSWGLLLPMGAIFARYLKTFKSADPAWFYLHVACQLIGYGVGVSGWATGIHLGNL 268
Query: 269 SKGITYSLHRNIGITVFALGTLQIFALFLRPKKDHKYRIYWNAYHHSVGYTIIILGIVNI 328
SKGITYSLHRNIGITVFALGTLQIFALFLRPKKDHKYRIYWNAYHHSVGYTIIILGIVNI
Sbjct: 269 SKGITYSLHRNIGITVFALGTLQIFALFLRPKKDHKYRIYWNAYHHSVGYTIIILGIVNI 328
Query: 329 FKGMSILNVEQKWKTGYIITISILGGIAVILEAVTWSIVLKRRKEENKSYNGASNGHLPL 388
FKGMSILNVEQKWKTGYIITISILGGIAVILEAVTWSIVLKRRKEENKSYNGASNGHLPL
Sbjct: 329 FKGMSILNVEQKWKTGYIITISILGGIAVILEAVTWSIVLKRRKEENKSYNGASNGHLPL 388
Query: 389 SM 390
SM
Sbjct: 389 SM 390
>Os03g0194900 DOMON related domain containing protein
Length = 384
Score = 313 bits (802), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 163/357 (45%), Positives = 218/357 (61%), Gaps = 6/357 (1%)
Query: 31 FSSNRVYAACSDLPHLGASVHWTYDXXXXXXXXXXXXXXXXXXGGWVAWGLNPTGGGMAG 90
F + + + C+ LP LGAS+HWT+ GWVAWG+N G M G
Sbjct: 29 FQNGQTFLKCNPLPVLGASLHWTHHAENGTADVAFRAPQQS--SGWVAWGINTRGTTMPG 86
Query: 91 TQALVALPKGGGGGYEVQTFDIEGYSLS-APGKLKYPATDLAAEVAADGRVSVFGKLALQ 149
+ +A + G G V +E S S G L + +G ++F +AL
Sbjct: 87 SSVFIA-SQDGSGSVSVLMTVLENTSPSLTNGSLSFDVLSPPTADYTNGVYTIFATIALP 145
Query: 150 NGTAEVNQVWQVGPVSSGSMVPHAMSSDNKAAMGKLNLLXXXXXXXXXXXXNLRKKNTHG 209
N + N VWQ GP S+G++ HA S N +M +L+ L ++N HG
Sbjct: 146 NNSTTQNTVWQAGPGSTGNVGQHATSGPNVQSMLRLDF-SSGQSTGTASNSRLHRRNIHG 204
Query: 210 ILNAVSWGLLLPMGAIFARYLKTFKSADPAWFYLHVACQLIGYGVGVSGWATGIHLGNLS 269
ILNAVSWG+L+PMGA+ ARYL+ F++ADPAWFYLH+ CQL GY +GV+GWA G+ LG+ S
Sbjct: 205 ILNAVSWGILIPMGAMIARYLRVFEAADPAWFYLHITCQLSGYILGVAGWALGLKLGSES 264
Query: 270 KGITYSLHRNIGITVFALGTLQIFALFLRPKKDHKYRIYWNAYHHSVGYTIIILGIVNIF 329
KGITYS HRNIGI +F L TLQ+FAL LRP K +KYR YWN YHHSVGY+ I+L VNIF
Sbjct: 265 KGITYSAHRNIGIAIFCLATLQVFALLLRPDKKNKYRFYWNIYHHSVGYSAIVLAAVNIF 324
Query: 330 KGMSILNVEQKWKTGYIITISILGGIAVILEAVTWSIVLKRRK-EENKSYNGASNGH 385
KG+ IL WK YI ++ L G+A++LEA+TW IVL+R+K +++ S GA+NG+
Sbjct: 325 KGLDILKPASGWKRSYIAILATLAGVALLLEAITWVIVLRRKKSDKSSSPYGATNGN 381
>Os03g0194300 DOMON related domain containing protein
Length = 417
Score = 186 bits (471), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 121/355 (34%), Positives = 175/355 (49%), Gaps = 17/355 (4%)
Query: 35 RVYAACSDLPHLGASVHWTYDXXXXXXXXXXXXXXXXXXGGWVAWGLNPTGGGMAG---- 90
+ YA C LP GA++ WTYD GWVAWG+N M G
Sbjct: 48 KTYAKCIALPTQGATLAWTYDARNATLDAAFTGSFISP-SGWVAWGVNKDAPAMTGARVL 106
Query: 91 -------TQALVALPKGGGGGYEVQTFDIEGYSLSAPGKLKYPATDLAAEVAADG-RVSV 142
T AL+ALP ++Q + L P + A DG V++
Sbjct: 107 AAFSDPSTGALLALPFLLSPDVKLQASPLVSRPLDIPLLASSASLVDPARTVRDGATVTI 166
Query: 143 FGKLALQNGTAEVNQVWQVGPVSSG-SMVPHAMSSDNKAAMGKLNLLXXXXXXXXXXXXN 201
+ L +++ VW G G S H + + A+ +++L
Sbjct: 167 AATIRLSPNRTKLHFVWNRGLYVQGYSPTIHPTDASDLASHATVDILTTATEASPTASAT 226
Query: 202 LRKKNTHGILNAVSWGLLLPMGAIFARYLKTFKSADPAWFYLHVACQLIGYGVGVSGWAT 261
L + THG LNA+SWG LLP+GA ARYL+ S PAWFY H A Q GY +G +G+A
Sbjct: 227 L--QWTHGSLNALSWGFLLPVGAAVARYLRPCASTGPAWFYAHAAIQATGYALGAAGFAL 284
Query: 262 GIHLGNLSKGITYSLHRNIGITVFALGTLQIFALFLRPKKDHKYRIYWNAYHHSVGYTII 321
G+ +G+ S G+TY LHR +GI G+LQ A+ RPK ++YR YW +YHH VGY +
Sbjct: 285 GLVMGSASPGVTYKLHRGLGIAAATAGSLQTLAMLFRPKTTNRYRKYWKSYHHLVGYGCV 344
Query: 322 ILGIVNIFKGMSILNV-EQKWKTGYIITISILGGIAVILEAVTWSIVLKRRKEEN 375
++G+VN+F+G ++ + WK GY + ++ L G V LE W + +R++EE
Sbjct: 345 VVGVVNVFQGFEVMGLGASYWKLGYCMALATLAGGCVALEVNAWVVFCRRQQEEK 399
>Os09g0500900 Cytochrome b561 / ferric reductase transmembrane domain containing
protein
Length = 148
Score = 159 bits (402), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 73/88 (82%), Positives = 83/88 (94%)
Query: 205 KNTHGILNAVSWGLLLPMGAIFARYLKTFKSADPAWFYLHVACQLIGYGVGVSGWATGIH 264
+ HG+LNAVSWG+LLPMGAI ARYLKTF+SADPAWFYLHV+CQLIGYGVGV+GWATGI+
Sbjct: 48 EKIHGLLNAVSWGILLPMGAILARYLKTFRSADPAWFYLHVSCQLIGYGVGVAGWATGIN 107
Query: 265 LGNLSKGITYSLHRNIGITVFALGTLQI 292
LGN+S GITY+LHRNIGI VFALGTLQ+
Sbjct: 108 LGNMSNGITYTLHRNIGIIVFALGTLQV 135
>Os01g0680900 DOMON related domain containing protein
Length = 335
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 75/173 (43%), Positives = 97/173 (56%), Gaps = 8/173 (4%)
Query: 205 KNTHGILNAVSWGLLLPMGAIFARYLKTFKSADPAWFYLHVACQLIGYGVGVSGWATGIH 264
K HG LN +WG+LLP+GAI ARY + + DP WFYLH QL+G+ +G++G G+
Sbjct: 166 KRAHGALNLFAWGVLLPIGAIIARYCRRW---DPLWFYLHAGIQLVGFILGLAGIVAGVS 222
Query: 265 LGNLSKGITYSLHRNIGITVFALGTLQIFALFLRPKKDHKYRIYWNAYHHSVGYTIIILG 324
L N + HR +GI V LG LQI A FLRP KD KYR YWN YHH VG +
Sbjct: 223 LYNKIQA-DVPAHRGLGIFVLVLGILQILAFFLRPHKDSKYRKYWNWYHHWVGRLALFFA 281
Query: 325 IVNIFKGMSILNVEQKWKTGYIITISILGGIAVILEAVTWSIVLKRRKEENKS 377
+NI G+ + WK GY ++IL + LE + W+ R K N S
Sbjct: 282 AINIVLGIKVGAAGNSWKIGYGFNLAILLITIITLEVLLWT----RWKNNNSS 330
>Os08g0524400 DOMON related domain containing protein
Length = 263
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 80/166 (48%), Positives = 99/166 (59%), Gaps = 11/166 (6%)
Query: 29 ERFSSNRVYAACSDLPHLGASVHWTYDXXXXXXXXXXXXXXXXXXGGWVAWGLNPTGGGM 88
E+F + R YAAC DLP LGA++H+TYD GGWVAWGLNPTG GM
Sbjct: 32 EKFPAGRAYAACEDLPSLGAALHYTYDASKSSLSVAFVAAPAGA-GGWVAWGLNPTGEGM 90
Query: 89 AGTQALVALPKGG--GGGYEVQTFDIEGY----SLSAPGKLKYPATDLAAEVAADGRVSV 142
AGTQALVAL KGG V+T++I GY S P + +PATDLAA+ + G++ +
Sbjct: 91 AGTQALVAL-KGGSSSSAPAVKTYNITGYVALGGASTP--IAFPATDLAADEGSGGKIRL 147
Query: 143 FGKLALQNGTAEVNQVWQVG-PVSSGSMVPHAMSSDNKAAMGKLNL 187
+GKL L G VNQVWQVG V+ G+ HA N A+ KL L
Sbjct: 148 YGKLQLHKGMKSVNQVWQVGSSVTGGAPDKHAFGPANLASKAKLVL 193
>Os05g0556400 DOMON related domain containing protein
Length = 369
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 66/167 (39%), Positives = 93/167 (55%), Gaps = 9/167 (5%)
Query: 205 KNTHGILNAVSWGLLLPMGAIFARYLKTFKSADPAWFYLHVACQLIGYGVGVSGWATGIH 264
+ HG LN +WG+L+P+GAI ARY F+ DP WFYLHV Q + + +G++G G+
Sbjct: 201 RRAHGALNLFAWGVLMPIGAILARY---FRRMDPLWFYLHVGVQFVAFIIGLAGVVAGVA 257
Query: 265 LGNLSKGITYSLHRNIGITVFALGTLQIFALFLRPKKDHKYRIYWNAYHHSVGYTIIILG 324
L N + HR +GI + LG LQI A FLRP D KYR YWN YHH G ++
Sbjct: 258 LYNKIQA-DIPAHRGLGIFILVLGILQILAFFLRPNTDSKYRKYWNWYHHWSGRLVLFFA 316
Query: 325 IVNIFKGMSILNVEQKWKTGYIITISILGGIAVILEAVTWSIVLKRR 371
VNI G+ + + WK GY ++I ++L + +L+ R
Sbjct: 317 AVNIVLGIHVGGGDNSWKIGYGFNLAI-----ILLAVIGLEFMLRTR 358
>Os05g0237200 DOMON related domain containing protein
Length = 487
Score = 126 bits (316), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 66/166 (39%), Positives = 94/166 (56%), Gaps = 4/166 (2%)
Query: 205 KNTHGILNAVSWGLLLPMGAIFARYLKTFKSADPAWFYLHVACQLIGYGVGVSGWATGIH 264
K HG WG+L+P+GAI ARYL+ DP W+YLHV Q +GY +G +G +GI
Sbjct: 310 KRNHGAFAIFGWGVLVPLGAIAARYLR---HKDPLWYYLHVLVQFLGYIIGFAGVVSGIA 366
Query: 265 LGNLSKGITYSLHRNIGITVFALGTLQIFALFLRPKKDHKYRIYWNAYHHSVGYTIIILG 324
L N + ++ HR++GI+V ALG+LQ+ A FL P KD + R WN YHH +G I L
Sbjct: 367 LYNRTYS-NFTTHRSLGISVLALGSLQVIAFFLHPNKDSQVRKCWNQYHHWLGRICIFLA 425
Query: 325 IVNIFKGMSILNVEQKWKTGYIITISILGGIAVILEAVTWSIVLKR 370
+NI G+ + + WK Y IS++ LE + + + K
Sbjct: 426 AINIVLGIELSDTNISWKVIYGAIISVMIISTTFLEVMMCTKLPKE 471
>Os01g0895300 Cytochrome b561 / ferric reductase transmembrane domain containing
protein
Length = 278
Score = 119 bits (297), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 65/160 (40%), Positives = 88/160 (55%), Gaps = 5/160 (3%)
Query: 205 KNTHGILNAVSWGLLLPMGAIFARYLKTFKSADPAWFYLHVACQLIGYGVGVSGWATGIH 264
K HG + + WG+L+P+G ARY FK DP WFY H++ Q +G+ +GV+G G
Sbjct: 118 KKWHGAMAGLGWGVLMPVGIALARY---FKKHDPFWFYAHISVQGVGFVLGVAGVVAGFK 174
Query: 265 LGNLSKGITYSLHRNIGITVFALGTLQIFALFLRPKKDHKYRIYWNAYHHSVGYTIIILG 324
L + G H+ IGITV LG LQ+ A RP K K R YWN YHH+VG +
Sbjct: 175 LNDDVPG--GDTHQAIGITVLVLGCLQVLAFLARPDKSSKVRRYWNWYHHNVGRAAVACA 232
Query: 325 IVNIFKGMSILNVEQKWKTGYIITISILGGIAVILEAVTW 364
NIF G++I + + GY I + +L +AV LE W
Sbjct: 233 AANIFIGLNIAHEGNAARAGYGIFLVVLALVAVFLEVKLW 272
>Os01g0895200 DOMON related domain containing protein
Length = 437
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 57/159 (35%), Positives = 81/159 (50%), Gaps = 6/159 (3%)
Query: 202 LRKKNTHGILNAVSWGLLLPMGAIFARYLKTFKSADPAWFYLHVACQLIGYGVGVSGWAT 261
L K HG+L VSWG ++P G AR++K F +P WFY H Q +G+ VG
Sbjct: 279 LSSKRRHGVLAVVSWGAMIPAGVAMARFMKRF---EPLWFYAHAGVQGLGFVVGAVAIVA 335
Query: 262 GIHLGNLSKGITYSLHRNIGITVFALGTLQIFALFLRPKKDHKYRIYWNAYHHSVGYTII 321
G L H+ +G+ V LQ+ A+ RP K+ K R YWN YHH VG +
Sbjct: 336 GFRLDGEDD---VGAHKAVGVAVLVCACLQVMAVLARPIKEAKARKYWNWYHHYVGRAAV 392
Query: 322 ILGIVNIFKGMSILNVEQKWKTGYIITISILGGIAVILE 360
+LG+ N+F GMS+ +W Y I + + ++LE
Sbjct: 393 VLGVGNVFYGMSLAKEGDEWSYVYGIFVGVCAVAYLVLE 431
>Os03g0194600 DOMON related domain containing protein
Length = 193
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/156 (34%), Positives = 73/156 (46%), Gaps = 12/156 (7%)
Query: 31 FSSNRVYAACSDLPHLGASVHWTYDXXXXXXXXXXXXXXXXXXGGWVAWGLNPTGGGMAG 90
F + R Y C LP LGAS+HWTY GGWVAWG+N G GM G
Sbjct: 31 FQAGRTYRRCDTLPVLGASLHWTYHPANGTADVAFRAPQSSS-GGWVAWGINTQGAGMVG 89
Query: 91 TQALVA----LPKGGGGGYEVQTFDIEGYSLS-APGKLKYPATDLAAEVAAD---GRVSV 142
+ +A G GG V T +E +S S G L++ D+ A AA+ G ++
Sbjct: 90 SSVFIASQINATGAGAGGVSVVTTVLESFSPSLRNGTLRF---DVPAPPAAEYSAGAYTI 146
Query: 143 FGKLALQNGTAEVNQVWQVGPVSSGSMVPHAMSSDN 178
+ +AL + N VWQ GPV G++ H + N
Sbjct: 147 YATVALPGNSTTQNMVWQAGPVRGGAIAMHPTTGAN 182
>Os08g0335600 DOMON related domain containing protein
Length = 204
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/164 (34%), Positives = 80/164 (48%), Gaps = 8/164 (4%)
Query: 31 FSSNRVYAACSDLPHLGASVHWTYDXXXXXXXXXXXXXXXXXXGGWVAWGLNPTGGGMAG 90
FSSN+ Y +C+ LP LGA++H+ Y GWVAWG+NP+G GM G
Sbjct: 40 FSSNQQYGSCATLPRLGATLHYNYTAAASTVAVAFRAPQPAGGKGWVAWGINPSGSGMVG 99
Query: 91 TQALVALPKGGGGGYEVQTFDIEGYSLS-APG---KLKYPATDLAAEVAADGR-VSVFGK 145
TQA+VA G T + Y+ S AP L P + ++AE + V V+
Sbjct: 100 TQAVVAFRHSNGSLVAYPTV-LGSYAPSMAPAAAKDLALPVSGVSAEENGKAKEVVVYAT 158
Query: 146 LALQNGT-AEVNQVWQVGPVSSGSM-VPHAMSSDNKAAMGKLNL 187
+AL G + N VWQ G +G + H S DN ++G ++
Sbjct: 159 VALPAGKGTKFNHVWQQGSSVAGDVPAAHPTSGDNVLSVGSIDF 202
>AK105009
Length = 204
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/164 (34%), Positives = 80/164 (48%), Gaps = 8/164 (4%)
Query: 31 FSSNRVYAACSDLPHLGASVHWTYDXXXXXXXXXXXXXXXXXXGGWVAWGLNPTGGGMAG 90
FSSN+ Y +C+ LP LGA++H+ Y GWVAWG+NP+G GM G
Sbjct: 40 FSSNQQYGSCATLPRLGATLHYNYTAAASTVAVAFRAPQPAGGKGWVAWGINPSGSGMVG 99
Query: 91 TQALVALPKGGGGGYEVQTFDIEGYSLS-APG---KLKYPATDLAAEVAADGR-VSVFGK 145
TQA+VA G T + Y+ S AP L P + ++AE + V V+
Sbjct: 100 TQAVVAFRHSNGSLVAYPTV-LGSYAPSMAPAAAKDLALPVSGVSAEENGKAKEVVVYAT 158
Query: 146 LALQNGT-AEVNQVWQVGPVSSGSM-VPHAMSSDNKAAMGKLNL 187
+AL G + N VWQ G +G + H S DN ++G ++
Sbjct: 159 VALPAGKGTKFNHVWQQGSSVAGDVPAAHPTSGDNVLSVGSIDF 202
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.320 0.137 0.426
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 11,944,445
Number of extensions: 479128
Number of successful extensions: 1647
Number of sequences better than 1.0e-10: 13
Number of HSP's gapped: 1626
Number of HSP's successfully gapped: 13
Length of query: 390
Length of database: 17,035,801
Length adjustment: 103
Effective length of query: 287
Effective length of database: 11,657,759
Effective search space: 3345776833
Effective search space used: 3345776833
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 157 (65.1 bits)