Os03g0194900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : DOMON related domain containing protein.
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Os03g0194900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : DOMON related domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 252.08 | 0.746 | 9.07 | 1.95 | 2.78 | -1.84 | -0.392 | 0.838 | 0.755 | 23.7 | 81.47 | 1323 | -- | -- |
| 252.91 | 0.741 | 9.08 | 1.87 | 2.79 | -1.78 | -0.335 | -- | 0.75 | 23.7 | 82.23 | 1318 | -- | -- |
| 252.72 | 0.74 | 9.07 | 1.97 | 2.79 | -1.85 | -- | 0.777 | 0.754 | 23.7 | 81.22 | 1318 | -- | -- |
| 253.39 | 0.741 | 9.08 | 1.88 | 2.79 | -1.79 | -- | -- | 0.749 | 23.7 | 82.15 | 1318 | -- | -- |
| 470.22 | 1.02 | 9 | 1.66 | -- | -3.37 | -- | 1.83 | 0.86 | -- | 107.1 | 3 | -- | -- |
| 326.4 | 0.847 | 9.07 | 1.58 | 2.6 | -- | -0.61 | -- | 0.799 | 23.5 | -- | -- | -- | -- |
| 328 | 0.848 | 9.06 | 1.6 | 2.6 | -- | -- | -- | 0.801 | 23.5 | -- | -- | -- | -- |
| 475.86 | 1.02 | 9 | 1.63 | -- | -3.26 | -- | -- | 0.85 | -- | 133.4 | 2 | -- | -- |
| 335.77 | 0.853 | 9.1 | -- | 3.12 | -1.96 | -- | -- | 0.655 | 23.6 | 94 | 1095 | -- | -- |
| 753.96 | 1.28 | 9 | 1.67 | -- | -- | -- | -- | 0.83 | -- | -- | -- | -- | -- |
| 395.86 | 0.931 | 9.1 | -- | 2.62 | -- | -- | -- | 0.623 | 23.5 | -- | -- | -- | -- |
| 545.82 | 1.09 | 9.04 | -- | -- | -3.18 | -- | -- | 0.658 | -- | 94 | 1095 | -- | -- |
| 827.96 | 1.34 | 9.05 | -- | -- | -- | -- | -- | 0.644 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 244.36 | humidity | 50 | 1440 | > th | dose dependent | rect. | 11 | 3 |
| 2 | 245.29 | humidity | 90 | 1440 | < th | dose dependent | rect. | 11 | 3 |
| 5 | 246.88 | humidity | 50 | 1440 | > th | dose dependent | rect. | 13 | 1 |
| 10 | 248.14 | humidity | 90 | 1440 | < th | dose dependent | rect. | 13 | 1 |
| 28 | 250.16 | humidity | 80 | 1440 | < th | dose dependent | rect. | 23 | 17 |
| 46 | 250.72 | radiation | 20 | 1440 | < th | dose dependent | rect. | 11 | 7 |
| 56 | 251.03 | radiation | 20 | 1440 | < th | dose dependent | rect. | 11 | 20 |
| 58 | 251.10 | humidity | 80 | 1440 | > th | dose independent | rect. | 11 | 3 |
| 59 | 251.10 | radiation | 20 | 1440 | < th | dose dependent | rect. | 11 | 10 |
| 61 | 251.11 | radiation | 20 | 1440 | < th | dose dependent | rect. | 11 | 12 |
| 79 | 251.27 | radiation | 20 | 1440 | < th | dose dependent | rect. | 11 | 16 |
| 88 | 251.43 | humidity | 80 | 1440 | < th | dose independent | rect. | 6 | 10 |
| 109 | 251.72 | humidity | 80 | 1440 | < th | dose dependent | sin | 2 | NA |
| 115 | 251.87 | radiation | 10 | 1440 | > th | dose independent | rect. | 8 | 23 |
| 157 | 252.38 | radiation | 20 | 1440 | < th | dose dependent | sin | 20 | NA |
| 166 | 252.50 | radiation | 20 | 1440 | < th | dose dependent | rect. | 11 | 3 |
| 174 | 252.56 | radiation | 10 | 1440 | > th | dose independent | rect. | 16 | 22 |
| 184 | 252.66 | humidity | 80 | 1440 | < th | dose independent | rect. | 11 | 3 |
| 202 | 252.92 | humidity | 80 | 1440 | > th | dose independent | rect. | 6 | 10 |
| 218 | 253.17 | radiation | 10 | 1440 | > th | dose independent | sin | 0 | NA |
| 219 | 253.17 | radiation | 10 | 1440 | > th | dose independent | rect. | 8 | 6 |
| 243 | 253.37 | radiation | 10 | 1440 | > th | dose independent | rect. | 10 | 23 |
| 283 | 253.61 | radiation | 10 | 1440 | > th | dose independent | rect. | 6 | 8 |
| 356 | 253.96 | radiation | 20 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 363 | 253.99 | humidity | 80 | 1440 | < th | dose dependent | rect. | 9 | 23 |
| 365 | 254.02 | radiation | 10 | 1440 | > th | dose independent | rect. | 8 | 10 |
| 378 | 254.03 | humidity | 50 | 1440 | > th | dose dependent | sin | 23 | NA |
| 425 | 254.17 | radiation | 10 | 1440 | > th | dose independent | no | NA | NA |
| 513 | 254.29 | humidity | 70 | 1440 | > th | dose independent | rect. | 17 | 22 |
| 523 | 254.34 | humidity | 80 | 1440 | < th | dose independent | sin | 2 | NA |
| 572 | 254.59 | humidity | 80 | 1440 | < th | dose dependent | no | NA | NA |
| 590 | 254.60 | humidity | 80 | 1440 | < th | dose dependent | rect. | 5 | 23 |
| 648 | 254.78 | humidity | 70 | 1440 | > th | dose independent | rect. | 13 | 1 |
| 752 | 255.22 | humidity | 80 | 1440 | > th | dose independent | sin | 1 | NA |
| 845 | 255.65 | humidity | 80 | 1440 | < th | dose dependent | rect. | 13 | 23 |
| 861 | 255.76 | humidity | 70 | 1440 | < th | dose independent | rect. | 17 | 22 |
| 870 | 255.82 | radiation | 20 | 1440 | < th | dose independent | rect. | 11 | 21 |
| 954 | 256.29 | radiation | 20 | 1440 | < th | dose dependent | rect. | 13 | 1 |
| 963 | 256.32 | radiation | 20 | 1440 | < th | dose independent | rect. | 11 | 6 |
| 987 | 256.47 | radiation | 20 | 1440 | < th | dose independent | rect. | 11 | 10 |
| 989 | 256.47 | radiation | 20 | 1440 | < th | dose independent | rect. | 11 | 12 |