Os08g0524200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : DOMON related domain containing protein.
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Os08g0524200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : DOMON related domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 65.23 | 0.379 | 13.7 | -0.555 | 1.29 | 1.33 | 0.103 | -4.54 | -0.41 | 8.21 | 24.79 | 1017 | -- | -- |
| 71.51 | 0.394 | 13.6 | 0.436 | 1.23 | 0.877 | 0.518 | -- | -0.126 | 8.12 | 25.37 | 1019 | -- | -- |
| 65.24 | 0.376 | 13.7 | -0.559 | 1.29 | 1.33 | -- | -4.55 | -0.418 | 8.22 | 24.66 | 1013 | -- | -- |
| 72.27 | 0.396 | 13.6 | 0.453 | 1.22 | 0.86 | -- | -- | -0.131 | 8.12 | 25.4 | 1036 | -- | -- |
| 136.96 | 0.545 | 13.8 | -0.554 | -- | 1.28 | -- | -4.21 | -0.317 | -- | 24.63 | 1306 | -- | -- |
| 93.42 | 0.453 | 13.6 | 0.676 | 1.08 | -- | 0.369 | -- | -0.0647 | 7.63 | -- | -- | -- | -- |
| 93.8 | 0.454 | 13.6 | 0.685 | 1.08 | -- | -- | -- | -0.0652 | 7.62 | -- | -- | -- | -- |
| 139.55 | 0.55 | 13.7 | 0.345 | -- | 0.674 | -- | -- | -0.312 | -- | 23.1 | 8588 | -- | -- |
| 77.38 | 0.41 | 13.6 | -- | 1.24 | 0.978 | -- | -- | -0.166 | 8.19 | 25.3 | 1036 | -- | -- |
| 156.61 | 0.585 | 13.6 | 0.7 | -- | -- | -- | -- | -0.049 | -- | -- | -- | -- | -- |
| 106.18 | 0.482 | 13.6 | -- | 1.09 | -- | -- | -- | -0.142 | 7.58 | -- | -- | -- | -- |
| 141.8 | 0.555 | 13.7 | -- | -- | 0.9 | -- | -- | -0.423 | -- | 18.47 | 10118 | -- | -- |
| 169.54 | 0.608 | 13.6 | -- | -- | -- | -- | -- | -0.127 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 62.36 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 16 | 8 |
| 2 | 62.39 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 7 | 18 |
| 4 | 62.50 | temperature | 25.0 | 720 | > th | dose dependent | sin | 13 | NA |
| 41 | 63.78 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 13 | 12 |
| 78 | 65.61 | radiation | 1.0 | 720 | > th | dose independent | rect. | 9 | 10 |
| 90 | 65.64 | radiation | 1.0 | 720 | < th | dose independent | rect. | 7 | 18 |
| 144 | 67.24 | radiation | 1.0 | 720 | < th | dose independent | rect. | 13 | 12 |
| 177 | 67.84 | radiation | 1.0 | 720 | < th | dose dependent | sin | 19 | NA |
| 181 | 67.89 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 7 | 8 |
| 184 | 67.92 | temperature | 25.0 | 720 | > th | dose independent | rect. | 15 | 9 |
| 208 | 68.15 | temperature | 25.0 | 720 | > th | dose independent | rect. | 15 | 7 |
| 215 | 68.30 | temperature | 25.0 | 720 | > th | dose independent | rect. | 10 | 14 |
| 220 | 68.40 | temperature | 25.0 | 720 | > th | dose independent | sin | 18 | NA |
| 260 | 68.95 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 7 | 8 |
| 261 | 68.95 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 19 | 13 |
| 265 | 68.97 | humidity | 70.0 | 720 | > th | dose dependent | rect. | 11 | 13 |
| 271 | 69.08 | humidity | 60.0 | 720 | > th | dose dependent | rect. | 14 | 10 |
| 280 | 69.13 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 7 | 12 |
| 304 | 69.33 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 19 | 13 |
| 308 | 69.42 | radiation | 1.0 | 720 | > th | dose independent | rect. | 17 | 2 |
| 322 | 69.46 | humidity | 70.0 | 720 | > th | dose independent | rect. | 14 | 10 |
| 338 | 69.55 | humidity | 70.0 | 720 | > th | dose independent | rect. | 14 | 19 |
| 347 | 69.64 | radiation | 1.0 | 720 | > th | dose independent | sin | 19 | NA |
| 375 | 69.82 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 12 | 1 |
| 408 | 70.01 | humidity | 70.0 | 720 | > th | dose dependent | rect. | 5 | 19 |
| 420 | 70.11 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 12 | 1 |
| 439 | 70.28 | humidity | 70.0 | 14400 | < th | dose dependent | rect. | 16 | 16 |
| 443 | 70.31 | humidity | 80.0 | 720 | < th | dose independent | rect. | 10 | 11 |
| 467 | 70.42 | humidity | 70.0 | 14400 | < th | dose dependent | rect. | 16 | 6 |
| 488 | 70.47 | humidity | 80.0 | 1440 | < th | dose independent | sin | 1 | NA |
| 502 | 70.50 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 11 | 3 |
| 531 | 70.57 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 11 | 10 |
| 546 | 70.63 | humidity | 90.0 | 720 | < th | dose dependent | rect. | 17 | 4 |
| 552 | 70.66 | radiation | 1.0 | 720 | < th | dose independent | sin | 20 | NA |
| 581 | 70.76 | humidity | 70.0 | 720 | > th | dose independent | sin | 12 | NA |
| 582 | 70.76 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 18 | 4 |
| 637 | 70.90 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 11 | 3 |
| 666 | 70.97 | humidity | 80.0 | 1440 | > th | dose independent | sin | 1 | NA |
| 684 | 71.01 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 19 | 1 |
| 694 | 71.03 | wind | 3.0 | 43200 | > th | dose dependent | rect. | 3 | 15 |
| 696 | 71.04 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 3 | 5 |
| 701 | 71.06 | wind | 7.0 | 43200 | < th | dose independent | rect. | 10 | 11 |
| 709 | 71.07 | humidity | 70.0 | 720 | > th | dose dependent | sin | 19 | NA |
| 722 | 71.12 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 12 | 4 |
| 726 | 71.14 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 19 | 1 |
| 728 | 71.14 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 19 | 1 |
| 740 | 71.18 | wind | 7.0 | 43200 | < th | dose independent | rect. | 12 | 9 |
| 748 | 71.19 | wind | 5.0 | 43200 | < th | dose independent | rect. | 3 | 17 |
| 752 | 71.20 | wind | 5.0 | 43200 | > th | dose independent | rect. | 9 | 13 |
| 762 | 71.21 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 20 | 21 |
| 780 | 71.24 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 3 | 1 |
| 783 | 71.24 | wind | 5.0 | 43200 | < th | dose independent | rect. | 5 | 13 |
| 792 | 71.25 | wind | 5.0 | 43200 | > th | dose dependent | sin | 20 | NA |
| 828 | 71.29 | wind | 5.0 | 43200 | < th | dose independent | sin | 23 | NA |
| 832 | 71.30 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 22 | 10 |
| 849 | 71.33 | humidity | 80.0 | 720 | > th | dose independent | rect. | 11 | 11 |
| 852 | 71.34 | wind | 7.0 | 43200 | > th | dose independent | rect. | 10 | 11 |
| 860 | 71.35 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 3 | 1 |
| 861 | 71.35 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 10 | 4 |
| 865 | 71.36 | wind | 7.0 | 43200 | > th | dose independent | rect. | 15 | 1 |
| 866 | 71.36 | radiation | 1.0 | 720 | < th | dose independent | rect. | 7 | 11 |
| 873 | 71.37 | wind | 5.0 | 43200 | > th | dose independent | rect. | 5 | 14 |
| 879 | 71.37 | wind | 3.0 | 43200 | > th | dose dependent | sin | 0 | NA |
| 880 | 71.37 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 9 | 8 |
| 889 | 71.39 | wind | 5.0 | 43200 | > th | dose independent | sin | 23 | NA |
| 895 | 71.39 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 7 | 18 |
| 909 | 71.40 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 18 | 23 |
| 919 | 71.42 | wind | 7.0 | 43200 | < th | dose independent | sin | 20 | NA |
| 922 | 71.42 | wind | 5.0 | 43200 | < th | dose independent | rect. | 9 | 7 |
| 943 | 71.43 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 9 | 5 |
| 966 | 71.45 | wind | 5.0 | 43200 | > th | dose independent | rect. | 9 | 7 |
| 967 | 71.45 | temperature | 25.0 | 720 | < th | dose independent | rect. | 14 | 10 |
| 973 | 71.46 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 13 | 10 |
| 979 | 71.46 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 13 | 10 |
| 988 | 71.47 | wind | 7.0 | 43200 | > th | dose independent | rect. | 12 | 9 |
| 995 | 71.47 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 19 | 1 |