Os08g0524400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : DOMON related domain containing protein.
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Os08g0524400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : DOMON related domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 469.2 | 1.02 | 6.92 | -0.677 | 1.23 | 4.44 | -0.387 | 5.39 | 0.504 | 6.18 | 5.739 | 1930 | -- | -- |
| 475.17 | 1.02 | 6.85 | -0.746 | 1.14 | 3.51 | -0.479 | -- | 0.59 | 5.8 | 6.161 | 1850 | -- | -- |
| 469.45 | 1.01 | 6.92 | -0.675 | 1.22 | 4.53 | -- | 5.84 | 0.513 | 6.15 | 5.879 | 1919 | -- | -- |
| 473.84 | 1.01 | 6.86 | -0.844 | 1.22 | 3.4 | -- | -- | 0.514 | 6.03 | 5.624 | 1841 | -- | -- |
| 530.47 | 1.07 | 6.93 | -0.592 | -- | 3.98 | -- | 5.18 | 0.635 | -- | 6.664 | 2520 | -- | -- |
| 594.77 | 1.14 | 6.92 | -1.61 | 1.11 | -- | -0.26 | -- | 0.272 | 5.54 | -- | -- | -- | -- |
| 594.94 | 1.14 | 6.91 | -1.61 | 1.11 | -- | -- | -- | 0.274 | 5.55 | -- | -- | -- | -- |
| 532.23 | 1.07 | 6.86 | -0.885 | -- | 2.74 | -- | -- | 0.618 | -- | 8.3 | 2648 | -- | -- |
| 489.73 | 1.03 | 6.83 | -- | 1.23 | 3.83 | -- | -- | 0.637 | 6.19 | 5.583 | 1837 | -- | -- |
| 658.52 | 1.2 | 6.93 | -1.57 | -- | -- | -- | -- | 0.3 | -- | -- | -- | -- | -- |
| 662.95 | 1.2 | 6.87 | -- | 1.08 | -- | -- | -- | 0.453 | 5.61 | -- | -- | -- | -- |
| 547.25 | 1.09 | 6.83 | -- | -- | 3.23 | -- | -- | 0.753 | -- | 6.199 | 2575 | -- | -- |
| 723.56 | 1.26 | 6.89 | -- | -- | -- | -- | -- | 0.475 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 469.70 | wind | 9 | 4320 | > th | dose dependent | rect. | 16 | 7 |
| 14 | 472.02 | wind | 9 | 4320 | > th | dose dependent | rect. | 16 | 2 |
| 18 | 473.68 | wind | 9 | 4320 | < th | dose independent | rect. | 16 | 10 |
| 21 | 473.85 | wind | 9 | 4320 | < th | dose independent | rect. | 16 | 12 |
| 22 | 474.04 | wind | 9 | 4320 | < th | dose independent | rect. | 16 | 6 |
| 30 | 474.41 | wind | 9 | 4320 | > th | dose independent | rect. | 16 | 7 |
| 33 | 474.49 | wind | 9 | 4320 | > th | dose independent | rect. | 16 | 10 |
| 44 | 475.34 | wind | 5 | 1440 | > th | dose dependent | rect. | 21 | 19 |
| 45 | 475.39 | wind | 9 | 4320 | < th | dose independent | rect. | 16 | 4 |
| 49 | 476.10 | wind | 9 | 4320 | > th | dose independent | rect. | 16 | 4 |
| 81 | 478.99 | wind | 7 | 1440 | < th | dose independent | rect. | 21 | 19 |
| 86 | 479.41 | wind | 7 | 1440 | > th | dose independent | rect. | 21 | 19 |
| 98 | 479.99 | wind | 5 | 1440 | > th | dose dependent | sin | 4 | NA |
| 132 | 481.54 | wind | 9 | 4320 | > th | dose dependent | sin | 11 | NA |
| 153 | 482.42 | wind | 7 | 1440 | > th | dose independent | sin | 6 | NA |
| 165 | 482.71 | wind | 9 | 4320 | > th | dose dependent | rect. | 16 | 21 |
| 167 | 482.77 | wind | 5 | 1440 | > th | dose dependent | rect. | 14 | 23 |
| 168 | 482.78 | wind | 7 | 1440 | < th | dose independent | sin | 6 | NA |
| 199 | 483.71 | wind | 5 | 1440 | > th | dose dependent | rect. | 1 | 23 |
| 208 | 483.84 | wind | 5 | 1440 | > th | dose dependent | no | NA | NA |
| 221 | 484.02 | wind | 5 | 1440 | > th | dose dependent | rect. | 6 | 23 |
| 255 | 484.35 | wind | 5 | 1440 | > th | dose dependent | rect. | 4 | 23 |
| 261 | 484.51 | wind | 7 | 1440 | < th | dose independent | rect. | 14 | 23 |
| 271 | 484.60 | wind | 7 | 1440 | > th | dose independent | rect. | 14 | 23 |
| 281 | 484.82 | wind | 5 | 1440 | > th | dose independent | rect. | 1 | 15 |
| 289 | 484.97 | wind | 7 | 4320 | > th | dose independent | rect. | 19 | 1 |
| 295 | 485.03 | wind | 5 | 1440 | > th | dose dependent | rect. | 11 | 23 |
| 389 | 486.39 | wind | 7 | 1440 | < th | dose independent | rect. | 7 | 22 |
| 400 | 486.47 | wind | 7 | 1440 | < th | dose independent | no | NA | NA |
| 402 | 486.50 | wind | 9 | 4320 | > th | dose independent | sin | 11 | NA |
| 411 | 486.60 | wind | 7 | 1440 | < th | dose independent | rect. | 1 | 23 |
| 412 | 486.62 | wind | 9 | 4320 | < th | dose independent | sin | 11 | NA |
| 413 | 486.62 | wind | 7 | 1440 | > th | dose independent | rect. | 1 | 23 |
| 418 | 486.70 | wind | 7 | 1440 | > th | dose independent | no | NA | NA |
| 420 | 486.70 | wind | 7 | 1440 | > th | dose independent | rect. | 7 | 22 |
| 448 | 486.94 | wind | 7 | 4320 | < th | dose independent | rect. | 19 | 1 |
| 467 | 487.15 | wind | 7 | 1440 | > th | dose independent | rect. | 4 | 23 |
| 485 | 487.33 | wind | 7 | 1440 | < th | dose independent | rect. | 11 | 23 |
| 520 | 487.74 | wind | 7 | 1440 | > th | dose independent | rect. | 11 | 23 |
| 527 | 487.84 | wind | 7 | 4320 | > th | dose dependent | rect. | 19 | 1 |