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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os01g0895200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : DOMON related domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.31 (0.024) R2 : 0.00484
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.0754 (0.0506) R2dN8 : 0.00625 R2N8 : 0.00484
σ : 0.453
deviance : 94.09
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = wind, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
87.29 0.439 3.32 0.0413 0.0551 -0.456 -0.463 1.03 -0.074 4.02 1.07 16 -- --
88.16 0.437 3.31 0.0827 0.065 -0.379 -0.572 -- -0.0631 3.94 1.052 15 -- --
87.87 0.437 3.32 0.0409 0.0531 -0.46 -- 1.21 -0.0735 3.35 1.06 16 -- --
89.11 0.44 3.31 0.0915 0.0649 -0.367 -- -- -0.06 3.81 1.064 15 -- --
88.01 0.437 3.32 0.0382 -- -0.492 -- 1.24 -0.0723 -- 1.049 16 -- --
91.3 0.448 3.31 0.129 0.169 -- -0.518 -- -0.067 4.12 -- -- -- --
92.06 0.449 3.31 0.135 0.166 -- -- -- -0.0641 4.13 -- -- -- --
89.31 0.44 3.31 0.0894 -- -0.404 -- -- -0.0581 -- 1.053 15 -- --
89.33 0.44 3.31 -- 0.0633 -0.38 -- -- -0.0699 3.76 1.086 15 -- --
93.56 0.452 3.31 0.141 -- -- -- -- -0.0597 -- -- -- -- --
92.54 0.45 3.31 -- 0.169 -- -- -- -0.0791 4.11 -- -- -- --
89.51 0.441 3.31 -- -- -0.415 -- -- -0.0679 -- 1.038 15 -- --
94.09 0.453 3.31 -- -- -- -- -- -0.0754 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 74.71 temperature 15.0 30 > th dose independent rect. 3 23
3 75.92 radiation 1.0 14400 < th dose dependent rect. 3 1
5 76.22 temperature 25.0 90 > th dose independent rect. 2 1
6 76.22 temperature 25.0 90 > th dose dependent rect. 2 1
9 76.28 atmosphere 1005.0 90 > th dose dependent rect. 2 1
17 76.30 atmosphere 995.0 30 > th dose independent rect. 3 23
21 76.31 wind 9.0 1440 < th dose independent rect. 3 1
22 76.31 temperature 10.0 1440 > th dose independent rect. 3 1
25 76.31 temperature 30.0 1440 < th dose independent rect. 3 1
29 76.31 humidity 50.0 1440 > th dose independent rect. 3 1
38 76.31 atmosphere 995.0 1440 > th dose independent rect. 3 1
39 76.31 radiation 1.0 1440 < th dose independent rect. 3 1
59 76.31 temperature 10.0 1440 > th dose independent rect. 4 23
72 76.42 wind 3.0 30 < th dose dependent rect. 2 1
73 76.46 wind 3.0 30 < th dose independent rect. 2 1
76 76.47 atmosphere 1005.0 30 > th dose independent rect. 2 1
86 76.54 humidity 90.0 30 > th dose independent rect. 2 1
88 76.56 humidity 60.0 30 > th dose dependent rect. 2 1
92 76.57 temperature 10.0 30 > th dose independent rect. 2 1
94 76.57 temperature 30.0 30 < th dose independent rect. 2 1
95 76.57 humidity 50.0 30 > th dose independent rect. 2 1
98 76.57 atmosphere 995.0 30 > th dose independent rect. 2 1
100 76.57 atmosphere 1010.0 30 < th dose independent rect. 2 1
102 76.57 radiation 1.0 30 < th dose independent rect. 2 1
107 76.57 precipitation 0.1 30 < th dose independent rect. 2 1
110 76.57 radiation 1.0 30 < th dose dependent rect. 2 1
115 76.57 precipitation 0.1 30 < th dose dependent rect. 2 1
121 76.71 atmosphere 1015.0 30 < th dose dependent rect. 2 1
124 76.84 temperature 30.0 30 < th dose dependent rect. 2 1
125 76.90 precipitation 0.1 30 < th dose independent rect. 3 23
126 76.90 precipitation 0.1 30 < th dose dependent rect. 3 23
130 76.98 wind 1.0 30 > th dose independent rect. 2 1
177 77.60 wind 9.0 30 < th dose independent rect. 3 23
194 80.01 humidity 50.0 30 > th dose independent rect. 3 23
208 81.92 temperature 30.0 30 < th dose independent rect. 3 23
244 82.77 atmosphere 1015.0 30 < th dose independent rect. 3 23
252 83.03 humidity 90.0 90 < th dose independent rect. 2 1
259 83.45 wind 1.0 30 < th dose independent rect. 24 3
265 83.74 radiation 10.0 30 < th dose dependent rect. 3 23
269 83.85 temperature 10.0 30 > th dose dependent rect. 3 23
274 84.04 temperature 25.0 270 > th dose independent rect. 23 4
292 84.36 wind 1.0 10 < th dose independent rect. 14 13
297 84.41 wind 1.0 10 < th dose independent rect. 17 10
309 84.49 wind 9.0 30 < th dose dependent rect. 3 23
310 84.54 radiation 10.0 30 < th dose independent rect. 3 23
315 84.61 atmosphere 1005.0 270 > th dose dependent rect. 23 4
331 84.93 temperature 15.0 10 > th dose independent rect. 16 10
334 84.98 wind 1.0 10 < th dose independent rect. 6 21
344 85.14 wind 1.0 10 < th dose independent rect. 8 19
369 85.60 wind 3.0 30 < th dose dependent rect. 22 5
401 85.99 humidity 90.0 10 > th dose independent rect. 23 4
412 86.09 precipitation 0.1 720 < th dose independent rect. 23 16
414 86.09 precipitation 0.1 720 < th dose dependent rect. 23 16
440 86.29 atmosphere 1015.0 1440 < th dose independent rect. 3 1
472 86.50 humidity 80.0 30 > th dose dependent rect. 22 5
486 86.61 atmosphere 1000.0 720 > th dose independent rect. 3 8
490 86.63 wind 9.0 720 < th dose independent rect. 3 8
491 86.65 humidity 50.0 720 > th dose independent rect. 3 8
494 86.67 wind 3.0 30 < th dose dependent rect. 20 7
496 86.68 temperature 10.0 720 > th dose independent rect. 3 8
497 86.68 temperature 10.0 720 > th dose independent rect. 15 8
499 86.68 temperature 10.0 720 > th dose independent rect. 11 16
500 86.68 temperature 10.0 720 > th dose independent rect. 23 16
501 86.68 atmosphere 995.0 720 > th dose independent rect. 23 16
507 86.72 temperature 15.0 720 > th dose independent rect. 14 1
509 86.72 humidity 50.0 30 > th dose dependent rect. 3 23
511 86.75 wind 1.0 10 > th dose independent sin 16 NA
521 86.80 temperature 10.0 10 > th dose dependent rect. 16 10
588 86.98 atmosphere 995.0 720 > th dose independent rect. 15 8
591 87.00 atmosphere 995.0 720 > th dose independent rect. 11 16
605 87.06 wind 3.0 30 < th dose dependent rect. 13 14
638 87.12 wind 1.0 10 < th dose independent rect. 2 5
656 87.17 wind 9.0 720 < th dose independent rect. 15 8
665 87.20 wind 1.0 30 > th dose dependent rect. 2 1
668 87.21 precipitation 0.1 720 < th dose independent rect. 3 8
670 87.21 precipitation 0.1 720 < th dose dependent rect. 3 8
671 87.21 wind 9.0 30 < th dose dependent rect. 3 10
692 87.28 precipitation 0.1 720 < th dose independent rect. 15 8
694 87.28 precipitation 0.1 720 < th dose dependent rect. 15 8
695 87.28 wind 9.0 30 < th dose dependent rect. 14 13
697 87.29 radiation 30.0 30 < th dose independent rect. 3 8
698 87.29 temperature 15.0 270 > th dose independent rect. 24 23
712 87.33 radiation 40.0 30 < th dose dependent rect. 3 8
727 87.38 atmosphere 1015.0 720 < th dose independent rect. 3 8
734 87.39 temperature 30.0 10 < th dose independent rect. 16 10
736 87.40 temperature 15.0 270 > th dose independent rect. 20 13
737 87.40 humidity 50.0 720 > th dose independent rect. 23 16
766 87.45 wind 1.0 30 > th dose independent rect. 3 23
786 87.47 wind 1.0 10 > th dose independent rect. 16 15
796 87.48 temperature 15.0 720 > th dose independent rect. 8 7
797 87.48 atmosphere 1005.0 10 > th dose dependent rect. 22 6
802 87.51 humidity 60.0 10 > th dose independent rect. 16 10
810 87.52 wind 1.0 10 > th dose independent rect. 24 22
827 87.56 humidity 90.0 1440 > th dose dependent rect. 15 1
832 87.57 temperature 15.0 270 > th dose independent rect. 13 22
836 87.58 precipitation 0.1 1440 > th dose independent rect. 15 1
839 87.58 precipitation 0.1 1440 > th dose dependent rect. 15 1
850 87.61 atmosphere 1010.0 10 < th dose independent rect. 16 10
863 87.64 temperature 15.0 1440 > th dose independent rect. 11 12
870 87.65 atmosphere 1015.0 90 < th dose independent rect. 11 16
885 87.67 humidity 90.0 1440 > th dose dependent rect. 11 3
888 87.68 atmosphere 1000.0 90 > th dose independent rect. 3 8
889 87.68 temperature 15.0 1440 > th dose independent rect. 8 17
895 87.69 wind 1.0 720 > th dose independent rect. 15 8
896 87.69 temperature 30.0 90 < th dose independent rect. 3 8
927 87.75 atmosphere 1005.0 90 > th dose dependent rect. 11 16
947 87.79 temperature 15.0 1440 > th dose independent rect. 10 18
950 87.79 atmosphere 1005.0 10 > th dose dependent rect. 20 8
952 87.80 radiation 40.0 90 < th dose independent rect. 11 16
962 87.82 precipitation 0.1 1440 < th dose independent rect. 15 1
963 87.82 atmosphere 1015.0 1440 < th dose independent rect. 1 7
964 87.82 wind 1.0 10 < th dose independent rect. 2 10
966 87.82 precipitation 0.1 1440 < th dose dependent rect. 15 1
967 87.83 humidity 90.0 1440 > th dose independent rect. 11 3
978 87.83 radiation 40.0 10 < th dose dependent rect. 14 12
981 87.84 atmosphere 1015.0 1440 < th dose independent rect. 1 1
983 87.84 temperature 15.0 1440 > th dose independent rect. 8 20
988 87.85 humidity 90.0 720 < th dose independent rect. 14 1