BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0895200 Os01g0895200|AK063282
(437 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G07570.1 | chr3:2418205-2420206 REVERSE LENGTH=370 110 2e-24
AT3G61750.1 | chr3:22857897-22859254 REVERSE LENGTH=399 107 9e-24
AT5G35735.1 | chr5:13900913-13902934 REVERSE LENGTH=405 90 2e-18
AT3G25290.1 | chr3:9208955-9210353 FORWARD LENGTH=394 86 3e-17
AT4G17280.1 | chr4:9678887-9680277 REVERSE LENGTH=403 83 3e-16
AT3G59070.1 | chr3:21832364-21834514 REVERSE LENGTH=467 83 3e-16
AT2G04850.1 | chr2:1704298-1705608 FORWARD LENGTH=405 82 7e-16
AT5G47530.1 | chr5:19281471-19282870 FORWARD LENGTH=396 81 9e-16
AT4G12980.1 | chr4:7589670-7591074 REVERSE LENGTH=395 79 4e-15
>AT3G07570.1 | chr3:2418205-2420206 REVERSE LENGTH=370
Length = 369
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 66/168 (39%), Positives = 92/168 (54%), Gaps = 9/168 (5%)
Query: 39 CTAALAVGDLIPFNTTGLNCFQAWSSQDFILRFGQDASAGSNVWNFVLSAPDAGGYISVG 98
C + L + DL FNT+ L C +AW+ Q+FILR+ + A N W+F+LSAPD+ +I +G
Sbjct: 30 CNSTLPLNDL-TFNTSLLQCTEAWTPQNFILRYARTAE---NTWSFILSAPDSSAFIGIG 85
Query: 99 FSPNXXXXXXXXXXX-XXXXXXXXTARQYYLGGTSSRSCPPGQGKLSLSTGAAAPTIVSQ 157
FS N T + Y LGG S P QG L++ G+ I S
Sbjct: 86 FSTNGQMIGSSAIVGWIPSDGGSGTVKPYLLGGKSPGEVNPDQGDLTIVNGSLK--IESV 143
Query: 158 GSRLYLAFQFSGQ-PRTDLVYAVGPAGSLPGTNGF-LAQHQYMTSGTI 203
SRLY+ FQ + PR L+YAVGPAG P + F L +H+++T+ TI
Sbjct: 144 SSRLYMRFQLTATLPRQSLLYAVGPAGFFPSSPDFRLREHRFVTTTTI 191
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 53/150 (35%), Positives = 76/150 (50%), Gaps = 3/150 (2%)
Query: 285 HGVLAVVSWGAMIPAGVAMARFMKRFEPLWFYAHAGVQXXXXXXXXXXXXXXFRLDGE-- 342
HG++ + WG +I G +AR MK+++P WFYAH +Q L+
Sbjct: 213 HGLMNMFGWGILIIVGAIVARHMKQWDPTWFYAHIALQTTGFLLGLTGVICGLVLENRLK 272
Query: 343 -DDVGAHKXXXXXXXXXXXXXXXXXXXRPIKEAKARKYWNWYHHYVGRAAVVLGVGNVFY 401
++V HK RP K++K RKYWNWYHH +GR ++L + N+FY
Sbjct: 273 ANNVSKHKGLGITILVMGVLQMLALLARPDKQSKYRKYWNWYHHNIGRLLIILAISNIFY 332
Query: 402 GMSLAKEGDEWSYVYGIFVGVCAVAYLVLE 431
G+ LAK G W+ YG V V A+ + LE
Sbjct: 333 GIHLAKAGTSWNGGYGFAVAVLALTAIGLE 362
>AT3G61750.1 | chr3:22857897-22859254 REVERSE LENGTH=399
Length = 398
Score = 107 bits (268), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 80/155 (51%), Gaps = 3/155 (1%)
Query: 285 HGVLAVVSWGAMIPAGVAMARFMKRFEPLWFYAHAGVQXXXXXXXXXXXXXXFRLDG--E 342
HGV+A++ WG ++P G +AR+++ +PLW+Y H G Q +L +
Sbjct: 220 HGVMAILGWGFLLPVGAILARYLRHKDPLWYYLHIGFQFTGFIFGLAAVILGIQLYNRIQ 279
Query: 343 DDVGAHKXXXXXXXXXXXXXXXXXXXRPIKEAKARKYWNWYHHYVGRAAVVLGVGNVFYG 402
D+ AH+ RP KE K R+YWNWYHH++GR ++ G N+ G
Sbjct: 280 PDIPAHRGIGIFLLVLSTLQVLAFFARPQKETKMRRYWNWYHHWIGRISLFFGAVNIVLG 339
Query: 403 MSLAKE-GDEWSYVYGIFVGVCAVAYLVLEEWRRR 436
+ +A GD W YG + V +A++VLE +R R
Sbjct: 340 IRMADNGGDGWKIGYGFVLSVTLLAFVVLEIFRIR 374
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 62/151 (41%), Gaps = 12/151 (7%)
Query: 53 TTGLNCFQAWSSQDFILRFGQDASAGSNVWNFVLSAPDAGGYISVGFSPNXXXXXXXXXX 112
+ + C W++ F+LR+ ++ NV ++SA G++ +GFS
Sbjct: 54 SDNMPCTPLWNT--FVLRYSENRD---NVMTIIVSALYTTGWVGIGFSKEGRMVGSSAMI 108
Query: 113 XXXXXXXXXTARQYYLGGTSSRSCPPGQGKLSLSTGAAAPTIVSQGSRLYLAFQFSGQ-- 170
+QYYL GT P QG+L L P + G+ +YLAFQ
Sbjct: 109 GWISKKGHAKIKQYYLQGTERDQVVPDQGELQLQ--KVPPVVALHGAMIYLAFQVKFAVR 166
Query: 171 -PRTDLVYAVGPAGSLPGTNGFLAQHQYMTS 200
PR ++ A A P G L +H T+
Sbjct: 167 VPRRAVILAFSTA--YPSKLGRLTKHDDKTT 195
>AT5G35735.1 | chr5:13900913-13902934 REVERSE LENGTH=405
Length = 404
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 69/155 (44%), Gaps = 12/155 (7%)
Query: 285 HGVLAVVSWGAMIPAGVAMARFMKRF-EPLWFYAHAGVQXXXXXXXXXXXXXXFRLDGED 343
HGVL VSWG ++P G MAR+MK F +P WFY H Q +L G D
Sbjct: 211 HGVLNAVSWGVLMPMGAMMARYMKVFADPTWFYLHIAFQVSGYVIGVAGWATGIKL-GND 269
Query: 344 DVGA----HKXXXXXXXXXXXXXXXXXXXRPIKEAKARKYWNWYHHYVGRAAVVLGVGNV 399
G H+ RP + K R YWN YHH VG ++L + N+
Sbjct: 270 SPGTSYSTHRNLGIALFTFATLQVFALLVRPKPDHKYRTYWNVYHHTVGYTTIILSIVNI 329
Query: 400 FYGMSLAKEGDEWSYVY---GIFVGVCAVAYLVLE 431
F G + D+W + Y IF+G C L+LE
Sbjct: 330 FKGFDILDPEDKWRWAYIGILIFLGACV---LILE 361
>AT3G25290.1 | chr3:9208955-9210353 FORWARD LENGTH=394
Length = 393
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 68/153 (44%), Gaps = 6/153 (3%)
Query: 285 HGVLAVVSWGAMIPAGVAMARFMKRFE---PLWFYAHAGVQXXXXXXXXXXXXXXFRLDG 341
HG+L VSWG + P G +AR+M+ F+ P WFY H Q +L
Sbjct: 220 HGILNAVSWGILFPIGAIIARYMRVFDSADPAWFYLHVSCQFSAYVIGVAGWATGLKLGN 279
Query: 342 EDD---VGAHKXXXXXXXXXXXXXXXXXXXRPIKEAKARKYWNWYHHYVGRAAVVLGVGN 398
E + AH+ RP K+ K R YWN YHH VG A + LG+ N
Sbjct: 280 ESEGIRFSAHRNIGIALFTLATIQMFAMLLRPKKDHKYRFYWNIYHHGVGYAILTLGIIN 339
Query: 399 VFYGMSLAKEGDEWSYVYGIFVGVCAVAYLVLE 431
VF G+++ K D + Y + V L+LE
Sbjct: 340 VFKGLNILKPQDTYKTAYIAVIAVLGGIALLLE 372
>AT4G17280.1 | chr4:9678887-9680277 REVERSE LENGTH=403
Length = 402
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 66/152 (43%), Gaps = 7/152 (4%)
Query: 285 HGVLAVVSWGAMIPAGVAMARFM---KRFEPLWFYAHAGVQXXXXXXXXXXXXXXFRLDG 341
HG+L VSWG M+P G +AR++ K +P WFY H Q +L G
Sbjct: 219 HGILNGVSWGIMMPLGAIIARYLRVAKSADPAWFYIHVFCQASAYIIGVAGWATGLKLGG 278
Query: 342 ED---DVGAHKXXXXXXXXXXXXXXXXXXXRPIKEAKARKYWNWYHHYVGRAAVVLGVGN 398
+ H+ RP E K R YWN YHH +G ++LGV N
Sbjct: 279 DSPGIQYSTHRAIGIALFSLATVQVFAMFLRPKPEHKHRLYWNIYHHTIGYTIIILGVVN 338
Query: 399 VFYGMSLAKEGDEWSYVY-GIFVGVCAVAYLV 429
VF G+ + +W Y GI V + VA L+
Sbjct: 339 VFKGLGILSPKKQWKNAYIGIIVVLAIVATLL 370
>AT3G59070.1 | chr3:21832364-21834514 REVERSE LENGTH=467
Length = 466
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 70/161 (43%), Gaps = 10/161 (6%)
Query: 285 HGVLAVVSWGAMIPAGVAMARFMKRFE---PLWFYAHAGVQXXXXXXXXX----XXXXXF 337
H ++ +SWG ++P GV AR+MK +E P WFY H Q
Sbjct: 220 HAIVNALSWGILMPIGVMAARYMKNYEVLDPTWFYIHVVCQTTGYFSGLIGGLGTAIYMA 279
Query: 338 RLDGEDDVGAHKXXXXXXXXXXXXXXXXXXXRPIKEAKARKYWNWYHHYVGRAAVVLGVG 397
R G H RP K+ K RKYWNWYHH +G +VL +
Sbjct: 280 RHTGMRTT-LHTVIGLLLFALGFLQILSLKARPNKDHKYRKYWNWYHHTMGYIVIVLSIY 338
Query: 398 NVFYGMSLAKEGDEWSYVYGIFVGVCAVAYLVLE--EWRRR 436
N++ G+S+ + G W Y + A +V+E ++++R
Sbjct: 339 NIYKGLSILQPGSIWKIAYTTIICCIAAFAVVMEILQFKKR 379
>AT2G04850.1 | chr2:1704298-1705608 FORWARD LENGTH=405
Length = 404
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 66/150 (44%), Gaps = 11/150 (7%)
Query: 285 HGVLAVVSWGAMIPAGVAMARFMKRFE---PLWFYAHAGVQXXXXXXXXXXXXXXFRLDG 341
HGV+ +SWG ++PAG AR++++ + P WFY HA +Q L
Sbjct: 219 HGVVNAISWGFLLPAGAVTARYLRQMQSIGPTWFYIHAAIQLTGFLLGTIGFSIGIVLGH 278
Query: 342 ED---DVGAHKXXXXXXXXXXXXXXXXXXXRPIKEAKARKYWNWYHHYVGRAAVVLGVGN 398
G H+ RP K R+YW YHH+VG A VV+GV N
Sbjct: 279 NSPGVTYGLHRSLGIATFTAAALQTLALLFRPKTTNKFRRYWKSYHHFVGYACVVMGVVN 338
Query: 399 VFYGMSLAKEGDEWSYV-----YGIFVGVC 423
VF G + +EG ++ + VGVC
Sbjct: 339 VFQGFEVLREGRSYAKLGYCLCLSTLVGVC 368
>AT5G47530.1 | chr5:19281471-19282870 FORWARD LENGTH=396
Length = 395
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 64/153 (41%), Gaps = 6/153 (3%)
Query: 285 HGVLAVVSWGAMIPAGVAMARFMK---RFEPLWFYAHAGVQXXXXXXXXXXXXXXFRLDG 341
HG+L VSWG M+P G +AR++K +P WFY H Q +L
Sbjct: 211 HGILNGVSWGIMMPIGAIIARYLKVSKSADPAWFYLHVFCQSSAYIIGVAGWATGLKLGN 270
Query: 342 ED---DVGAHKXXXXXXXXXXXXXXXXXXXRPIKEAKARKYWNWYHHYVGRAAVVLGVGN 398
E H+ RP E K R YWN YHH VG + ++L V N
Sbjct: 271 ESAGIQFTFHRAVGIALFCLATIQVFAMFLRPKPEHKYRVYWNIYHHTVGYSVIILAVVN 330
Query: 399 VFYGMSLAKEGDEWSYVYGIFVGVCAVAYLVLE 431
VF G+ + +W Y + V + +VLE
Sbjct: 331 VFKGLDILSPEKQWRNAYTAIIVVLGIVAVVLE 363
>AT4G12980.1 | chr4:7589670-7591074 REVERSE LENGTH=395
Length = 394
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 64/153 (41%), Gaps = 6/153 (3%)
Query: 285 HGVLAVVSWGAMIPAGVAMARFMKRFE---PLWFYAHAGVQXXXXXXXXXXXXXXFRLDG 341
HG+L VSWG + P G +AR+M+ FE P WFY H Q +L
Sbjct: 221 HGILNAVSWGLLFPIGAMIARYMRIFESADPAWFYLHVSCQFSAYVIGVAGWATGLKLGS 280
Query: 342 EDD---VGAHKXXXXXXXXXXXXXXXXXXXRPIKEAKARKYWNWYHHYVGRAAVVLGVGN 398
E H+ RP K+ K R WN YHH VG + ++LG+ N
Sbjct: 281 ESKGIQYNTHRNIGICLFSIATLQMFAMLLRPRKDHKFRFVWNIYHHGVGYSILILGIIN 340
Query: 399 VFYGMSLAKEGDEWSYVYGIFVGVCAVAYLVLE 431
VF G+S+ + Y +G L+LE
Sbjct: 341 VFKGLSILNPKHTYKTAYIAVIGTLGGITLLLE 373
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.323 0.137 0.447
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 6,097,628
Number of extensions: 197124
Number of successful extensions: 368
Number of sequences better than 1.0e-05: 9
Number of HSP's gapped: 348
Number of HSP's successfully gapped: 11
Length of query: 437
Length of database: 11,106,569
Length adjustment: 102
Effective length of query: 335
Effective length of database: 8,310,137
Effective search space: 2783895895
Effective search space used: 2783895895
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 113 (48.1 bits)