Os08g0335600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : DOMON related domain containing protein.
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Os08g0335600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : DOMON related domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 77.84 | 0.415 | 2.91 | -0.00722 | 0.145 | -1.11 | -0.617 | -2.59 | 0.0809 | 4.85 | 7.398 | 83 | -- | -- |
| 79.04 | 0.417 | 2.89 | -0.0487 | 0.146 | -0.467 | -0.761 | -- | 0.0779 | 4.53 | 7.398 | 83 | -- | -- |
| 77.06 | 0.412 | 2.89 | -0.0547 | 0.128 | -1.36 | -- | -2.6 | 0.0953 | 4.42 | 7.514 | 80 | -- | -- |
| 80.01 | 0.419 | 2.88 | -0.0502 | 0.116 | -0.66 | -- | -- | 0.0976 | 4.51 | 7.514 | 80 | -- | -- |
| 77.91 | 0.413 | 2.89 | -0.0543 | -- | -1.28 | -- | -2.53 | 0.0967 | -- | 7.501 | 80 | -- | -- |
| 81.57 | 0.423 | 2.89 | -0.106 | 0.0885 | -- | -0.589 | -- | 0.0718 | 4.69 | -- | -- | -- | -- |
| 82.47 | 0.425 | 2.89 | -0.103 | 0.0863 | -- | -- | -- | 0.0749 | 5.23 | -- | -- | -- | -- |
| 80.71 | 0.42 | 2.88 | -0.05 | -- | -0.608 | -- | -- | 0.0988 | -- | 7.501 | 80 | -- | -- |
| 80.07 | 0.419 | 2.88 | -- | 0.116 | -0.678 | -- | -- | 0.104 | 4.51 | 7.514 | 80 | -- | -- |
| 82.86 | 0.425 | 2.89 | -0.1 | -- | -- | -- | -- | 0.077 | -- | -- | -- | -- | -- |
| 82.75 | 0.426 | 2.88 | -- | 0.0845 | -- | -- | -- | 0.0864 | 5.27 | -- | -- | -- | -- |
| 80.77 | 0.42 | 2.88 | -- | -- | -0.626 | -- | -- | 0.105 | -- | 7.501 | 80 | -- | -- |
| 83.12 | 0.426 | 2.88 | -- | -- | -- | -- | -- | 0.0881 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 65.14 | wind | 5 | 10 | > th | dose independent | rect. | 10 | 1 |
| 5 | 65.14 | wind | 5 | 10 | > th | dose dependent | rect. | 10 | 1 |
| 9 | 65.26 | wind | 7 | 90 | > th | dose dependent | rect. | 8 | 1 |
| 10 | 65.29 | humidity | 90 | 90 | > th | dose independent | rect. | 8 | 1 |
| 12 | 65.30 | humidity | 90 | 90 | > th | dose dependent | rect. | 8 | 1 |
| 35 | 66.42 | wind | 9 | 90 | > th | dose dependent | rect. | 22 | 12 |
| 221 | 74.42 | wind | 7 | 30 | < th | dose independent | rect. | 21 | 23 |
| 226 | 74.58 | temperature | 25 | 30 | > th | dose independent | rect. | 4 | 1 |
| 248 | 74.68 | wind | 7 | 90 | > th | dose independent | sin | 7 | NA |
| 268 | 74.77 | wind | 1 | 30 | > th | dose dependent | rect. | 4 | 1 |
| 279 | 74.85 | humidity | 90 | 10 | < th | dose independent | rect. | 4 | 1 |
| 296 | 74.97 | temperature | 25 | 90 | > th | dose dependent | rect. | 4 | 1 |
| 305 | 75.04 | wind | 7 | 90 | < th | dose independent | sin | 7 | NA |
| 391 | 75.45 | wind | 7 | 90 | > th | dose dependent | sin | 7 | NA |
| 408 | 75.47 | wind | 7 | 720 | > th | dose dependent | rect. | 22 | 13 |
| 446 | 75.65 | temperature | 20 | 30 | < th | dose independent | rect. | 1 | 7 |
| 451 | 75.67 | wind | 7 | 10 | > th | dose independent | sin | 6 | NA |
| 468 | 75.71 | temperature | 20 | 90 | < th | dose dependent | rect. | 24 | 9 |
| 556 | 75.90 | wind | 5 | 10 | > th | dose dependent | sin | 5 | NA |
| 666 | 76.11 | wind | 7 | 10 | < th | dose independent | sin | 6 | NA |
| 780 | 76.42 | atmosphere | 1015 | 30 | < th | dose independent | rect. | 21 | 23 |
| 811 | 76.49 | humidity | 90 | 1440 | > th | dose dependent | rect. | 16 | 1 |
| 870 | 76.57 | wind | 7 | 720 | < th | dose independent | rect. | 1 | 8 |
| 918 | 76.68 | temperature | 20 | 90 | < th | dose independent | rect. | 1 | 1 |
| 977 | 76.75 | temperature | 20 | 10 | < th | dose dependent | rect. | 1 | 1 |
| 978 | 76.75 | temperature | 20 | 90 | < th | dose dependent | rect. | 1 | 1 |