Os03g0194600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : DOMON related domain containing protein.
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Os03g0194600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : DOMON related domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 93.54 | 0.454 | 11.2 | -0.64 | 0.173 | -1.09 | -1.34 | -4.75 | 0.0986 | 8.54 | 20.5 | 728 | -- | -- |
| 101 | 0.468 | 11.1 | 0.364 | 0.146 | -1.38 | -0.239 | -- | 0.257 | 7.14 | 25.18 | 858 | -- | -- |
| 98.02 | 0.461 | 11.1 | -0.446 | 0.175 | -1.14 | -- | -3.51 | 0.164 | 8.17 | 20.67 | 752 | -- | -- |
| 101.14 | 0.468 | 11.1 | 0.341 | 0.166 | -1.39 | -- | -- | 0.244 | 6.56 | 25.21 | 862 | -- | -- |
| 99.3 | 0.464 | 11.1 | -0.345 | -- | -1.23 | -- | -3.31 | 0.199 | -- | 21.3 | 729 | -- | -- |
| 146.98 | 0.568 | 11.1 | 0.0164 | 0.571 | -- | 0.00446 | -- | 0.146 | 8.36 | -- | -- | -- | -- |
| 146.98 | 0.568 | 11.1 | 0.0165 | 0.571 | -- | -- | -- | 0.146 | 8.36 | -- | -- | -- | -- |
| 101.65 | 0.47 | 11.1 | 0.362 | -- | -1.49 | -- | -- | 0.283 | -- | 24.71 | 795 | -- | -- |
| 103.54 | 0.474 | 11.1 | -- | 0.252 | -1.27 | -- | -- | 0.0862 | 7.51 | 27.37 | 887 | -- | -- |
| 165.11 | 0.6 | 11.1 | 0.0199 | -- | -- | -- | -- | 0.152 | -- | -- | -- | -- | -- |
| 146.99 | 0.567 | 11.1 | -- | 0.571 | -- | -- | -- | 0.145 | 8.36 | -- | -- | -- | -- |
| 104.88 | 0.477 | 11.1 | -- | -- | -1.43 | -- | -- | 0.216 | -- | 25.14 | 789 | -- | -- |
| 165.12 | 0.6 | 11.1 | -- | -- | -- | -- | -- | 0.15 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 91.81 | temperature | 20 | 1440 | > th | dose dependent | rect. | 17 | 5 |
| 2 | 91.97 | temperature | 20 | 1440 | > th | dose dependent | rect. | 16 | 7 |
| 5 | 92.19 | temperature | 20 | 1440 | > th | dose dependent | rect. | 16 | 19 |
| 29 | 93.03 | temperature | 10 | 1440 | > th | dose dependent | rect. | 17 | 3 |
| 39 | 93.13 | temperature | 20 | 1440 | > th | dose dependent | rect. | 19 | 1 |
| 59 | 93.40 | temperature | 20 | 720 | > th | dose dependent | rect. | 3 | 22 |
| 72 | 93.49 | temperature | 20 | 720 | > th | dose dependent | rect. | 7 | 23 |
| 103 | 93.72 | temperature | 15 | 720 | > th | dose dependent | rect. | 7 | 18 |
| 106 | 93.77 | temperature | 20 | 720 | > th | dose dependent | no | NA | NA |
| 137 | 94.02 | temperature | 20 | 1440 | > th | dose dependent | sin | 14 | NA |
| 147 | 94.11 | temperature | 10 | 720 | > th | dose dependent | rect. | 7 | 16 |
| 155 | 94.19 | temperature | 20 | 1440 | > th | dose dependent | rect. | 1 | 10 |
| 166 | 94.27 | temperature | 20 | 720 | > th | dose dependent | rect. | 21 | 23 |
| 173 | 94.34 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 5 |
| 177 | 94.37 | temperature | 20 | 1440 | > th | dose dependent | sin | 7 | NA |
| 253 | 94.75 | temperature | 30 | 1440 | < th | dose dependent | rect. | 18 | 2 |
| 384 | 95.40 | temperature | 25 | 1440 | > th | dose independent | rect. | 17 | 6 |
| 386 | 95.41 | temperature | 25 | 1440 | < th | dose independent | rect. | 17 | 6 |
| 547 | 96.14 | temperature | 10 | 720 | > th | dose dependent | no | NA | NA |
| 815 | 96.93 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 19 |
| 840 | 96.99 | temperature | 30 | 90 | < th | dose dependent | rect. | 5 | 23 |
| 857 | 97.04 | temperature | 30 | 720 | < th | dose dependent | rect. | 6 | 17 |