BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0194600 Os03g0194600|AK062839
(193 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G48750.1 | chr5:19770052-19770819 REVERSE LENGTH=256 105 2e-23
AT5G35735.1 | chr5:13900913-13902934 REVERSE LENGTH=405 103 5e-23
AT3G59070.1 | chr3:21832364-21834514 REVERSE LENGTH=467 103 7e-23
AT5G47530.1 | chr5:19281471-19282870 FORWARD LENGTH=396 94 6e-20
AT4G17280.1 | chr4:9678887-9680277 REVERSE LENGTH=403 91 3e-19
AT3G25290.1 | chr3:9208955-9210353 FORWARD LENGTH=394 90 6e-19
AT4G12980.1 | chr4:7589670-7591074 REVERSE LENGTH=395 90 7e-19
AT3G07390.1 | chr3:2365452-2366273 FORWARD LENGTH=274 87 4e-18
AT2G04850.1 | chr2:1704298-1705608 FORWARD LENGTH=405 76 1e-14
>AT5G48750.1 | chr5:19770052-19770819 REVERSE LENGTH=256
Length = 255
Score = 105 bits (261), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 85/172 (49%), Gaps = 6/172 (3%)
Query: 23 QPDCANATFQAGRTYRRCDTLPVLGASLHWTYHPANGTADVAFRAPQSSSGGWVAWGINT 82
Q C + F G+ +R C LPVL + LH++Y G +VA+R S W+AWGIN
Sbjct: 31 QVSCDSHNFNNGKHFRSCVDLPVLDSFLHYSYVRETGVLEVAYRHTNIESSSWIAWGINP 90
Query: 83 QGAGMVGSSVFIASQINXXXXXXXXXXXXXXXLESFSPSLRNGTLRFDVPAPPAAEYSAG 142
GM+G+ +A + + ++P L+ G L F V +AEY
Sbjct: 91 TSKGMIGAQTLLAYR----NSTSGFMRAYTSSINGYTPMLQEGPLSFRV-TQLSAEYLNR 145
Query: 143 AYTIYATVALPGNSTTQNMVWQAGPVR-GGAIAMHPTTGANLRSTKKHDFTS 193
TI+AT+ P N+T N +WQ GP++ G + MH +G +L+S D S
Sbjct: 146 EMTIFATMVWPSNTTVVNHLWQDGPLKEGDRLGMHAMSGNHLKSMANLDLLS 197
>AT5G35735.1 | chr5:13900913-13902934 REVERSE LENGTH=405
Length = 404
Score = 103 bits (258), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 60/169 (35%), Positives = 80/169 (47%), Gaps = 5/169 (2%)
Query: 23 QPDCANATFQAGRTYRRCDTLPVLGASLHWTYHPANGTADVAFRAPQSSSGGWVAWGINT 82
Q C F + C L LG+ LHWTY+ NGT +A+R P +S+ WVAWG+N
Sbjct: 26 QSLCNTHRFTNNLAFADCSDLSALGSFLHWTYNEQNGTVSIAYRHPGTSASSWVAWGLNP 85
Query: 83 QGAGMVGSSVFIASQINXXXXXXXXXXXXXXXLESFSPSLRNGTLRFDVPAPPAAEYSAG 142
MVG+ +A + S+ L +L F V A S G
Sbjct: 86 SSTQMVGTQALVA----FTNTTTNQFQAYTSSVSSYGTRLERSSLSFGVSGLSATLVS-G 140
Query: 143 AYTIYATVALPGNSTTQNMVWQAGPVRGGAIAMHPTTGANLRSTKKHDF 191
TI+AT+ L N T N +WQ GPV G A H T+G N+RS+ + DF
Sbjct: 141 EVTIFATLELSPNLITANQLWQVGPVVNGVPASHQTSGDNMRSSGRIDF 189
>AT3G59070.1 | chr3:21832364-21834514 REVERSE LENGTH=467
Length = 466
Score = 103 bits (256), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 83/169 (49%), Gaps = 6/169 (3%)
Query: 26 CANATFQAGRTYRRCDTLPVLGASLHWTYHPANGTADVAFRAPQSSSGGWVAWGINTQGA 85
C + +F G+++R C L VL + LH+ Y G ++A+ S W++W IN
Sbjct: 37 CESYSFNNGKSFRSCTDLLVLNSYLHFNYAQETGVLEIAYHHSNLESSSWISWAINPTSK 96
Query: 86 GMVGSSVFIASQINXXXXXXXXXXXXXXXLESFSPSLRNGTLRFDVPAPPAAEYSAGAYT 145
GMVG+ +A + + S+SP L+ L V +AEYS G
Sbjct: 97 GMVGAQALVAYR----NSTSGVMRAYTSSINSYSPMLQESPLSLRV-TQVSAEYSNGEMM 151
Query: 146 IYATVALPGNSTTQNMVWQAGPVR-GGAIAMHPTTGANLRSTKKHDFTS 193
I+AT+ LP N+T N +WQ GP++ G + MH +G NL+S D S
Sbjct: 152 IFATLVLPPNTTVVNHLWQDGPLKEGDRLGMHAMSGDNLKSMASLDLLS 200
>AT5G47530.1 | chr5:19281471-19282870 FORWARD LENGTH=396
Length = 395
Score = 93.6 bits (231), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 79/170 (46%), Gaps = 7/170 (4%)
Query: 25 DCANATFQAGRTYRRCDTLPVLGASLHWTYHPANGTADVAFRAPQSSSGGWVAWGINTQG 84
C+N F R + C+ LPVL + LH+TY ++G +A+R + + G WVAW +N
Sbjct: 26 KCSNYKFSTNRLFESCNDLPVLDSFLHYTYDSSSGNLQIAYRHTKLTPGKWVAWAVNPTS 85
Query: 85 AGMVGSSVFIASQINXXXXXXXXXXXXXXXLESFSPSLRNGTLRFDVPAPPAAEYSAGAY 144
GMVG+ +A + S+ SL L F+V + +A Y
Sbjct: 86 TGMVGAQAIVA-----YPQSDGTVRAYTSPISSYQTSLLEAELSFNV-SQLSATYQNNEM 139
Query: 145 TIYATVALP-GNSTTQNMVWQAGPVRGGAIAMHPTTGANLRSTKKHDFTS 193
IYA + LP N N VWQ G + G HPT+G N+RS + S
Sbjct: 140 VIYAILNLPLANGGIINTVWQDGSLSGNNPLPHPTSGNNVRSVSTLNLVS 189
>AT4G17280.1 | chr4:9678887-9680277 REVERSE LENGTH=403
Length = 402
Score = 90.9 bits (224), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 79/164 (48%), Gaps = 9/164 (5%)
Query: 26 CANATFQAGRTYRRCDTLPVLGASLHWTYHPANGTADVAFRAPQSSSGGWVAWGINTQGA 85
C+ F + + C+ LP L + LH+TY + G+ +A+R + +SG WVAW +N
Sbjct: 34 CSKYKFSSNNVFDSCNDLPFLDSFLHYTYESSTGSLHIAYRHTKLTSGKWVAWAVNPTST 93
Query: 86 GMVGSSVFIASQINXXXXXXXXXXXXXXXLESFSPSLRNGTLRFDVPAPPAAEYSAGAYT 145
GMVG+ +A + S+ SL G L F+V +A Y
Sbjct: 94 GMVGAQAIVA-----YPQSDGTVRVYTSPIRSYQTSLLEGDLSFNVSG-LSATYQNNEIV 147
Query: 146 IYATVALP---GNSTTQNMVWQAGPVRGGAIAMHPTTGANLRST 186
+ A++ L GN T N VWQ G + G ++ HPT+G N+RS
Sbjct: 148 VLASLKLAQDLGNGGTINTVWQDGSMSGNSLLPHPTSGNNVRSV 191
>AT3G25290.1 | chr3:9208955-9210353 FORWARD LENGTH=394
Length = 393
Score = 90.1 bits (222), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 62/173 (35%), Positives = 79/173 (45%), Gaps = 12/173 (6%)
Query: 26 CANATFQAGRTYRRCDTLPVLGASLHWTYHPANGTADVAFRAPQSSSGGWVAWGINTQGA 85
C + TF +TY C LP L A LH++Y +N T V F AP + GGW+AW IN +
Sbjct: 28 CKSQTFSGDKTYPHCLDLPQLKAFLHYSYDASNTTLAVVFSAPPAKPGGWIAWAINPKAT 87
Query: 86 GMVGSSVFIASQINXXXXXXXXXXXXXXXLESFSPSLRNGTLRFDVPAPPAAE--YSAGA 143
GMVGS +A + + S+S SL L FDV A E G+
Sbjct: 88 GMVGSQTLVAYK----DPGNGVAVVKTLNISSYS-SLIPSKLAFDVWDMKAEEAARDGGS 142
Query: 144 YTIYATVALPGNSTTQ---NMVWQAGPVR--GGAIAMHPTTGANLRSTKKHDF 191
I+A V +P + + N VWQ GP GG I H ANL S D
Sbjct: 143 LRIFARVKVPADLVAKGKVNQVWQVGPELGPGGMIGRHAFDSANLASMSSLDL 195
>AT4G12980.1 | chr4:7589670-7591074 REVERSE LENGTH=395
Length = 394
Score = 90.1 bits (222), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 63/169 (37%), Positives = 78/169 (46%), Gaps = 11/169 (6%)
Query: 30 TFQAGRTYRRCDTLPVLGASLHWTYHPANGTADVAFRAPQSSSGGWVAWGINTQGAGMVG 89
TF ++Y C LP L A LH++Y +N T V F AP S GGW+AW IN + GM G
Sbjct: 33 TFSGVKSYPHCLDLPDLKAILHYSYDASNTTLAVVFSAPPSKPGGWIAWAINPKSTGMAG 92
Query: 90 SSVFIASQINXXXXXXXXXXXXXXXLESFSPSLRNGTLRFDVPAPPAAEYS--AGAYTIY 147
S +AS+ + S PS L FDV A E + GA I+
Sbjct: 93 SQALVASK-DPSTGVASVTTLNIVSYSSLVPS----KLSFDVWDVKAEEAANDGGALRIF 147
Query: 148 ATVALPGN---STTQNMVWQAGP-VRGGAIAMHPTTGANLRSTKKHDFT 192
A V +P + S N VWQ GP V G I H +G NL S D T
Sbjct: 148 AKVKVPADLAASGKVNQVWQVGPGVSNGRIQAHDFSGPNLNSVGSLDLT 196
>AT3G07390.1 | chr3:2365452-2366273 FORWARD LENGTH=274
Length = 273
Score = 87.4 bits (215), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 60/172 (34%), Positives = 81/172 (47%), Gaps = 7/172 (4%)
Query: 23 QPDCANATFQAGRTYRRCDTLPVLGASLHWTYHPANGTADVAFRA-PQSSSGGWVAWGIN 81
Q C + + + C+ LPVL + LH+TY+ +N + VAF A P ++GGWVAW IN
Sbjct: 47 QQACKSQNLNSAGPFDSCEDLPVLNSYLHYTYNSSNSSLSVAFVATPSQANGGWVAWAIN 106
Query: 82 TQGAGMVGSSVFIASQINXXXXXXXXXXXXXXXLESFSPSLRNGTLRFDVPAPPAAEYSA 141
G M GS F+A + + S+S SL G L FD A S
Sbjct: 107 PTGTKMAGSQAFLAYR----SGGGAAPVVKTYNISSYS-SLVEGKLAFDFWNLRAESLSG 161
Query: 142 GAYTIYATVALPGNSTTQNMVWQ-AGPVRGGAIAMHPTTGANLRSTKKHDFT 192
G I+ TV +P + + N VWQ G V G +HP NL S + FT
Sbjct: 162 GRIAIFTTVKVPAGADSVNQVWQIGGNVTNGRPGVHPFGPDNLGSHRVLSFT 213
>AT2G04850.1 | chr2:1704298-1705608 FORWARD LENGTH=405
Length = 404
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/183 (32%), Positives = 78/183 (42%), Gaps = 27/183 (14%)
Query: 30 TFQAGRTYRRCDTLPVLGASLHWTYHPANGTADVAFRAPQSSSGGWVAWGINTQG-AGMV 88
T A +++ +C +LP AS+ WTYHP N T D+ F S GWV WGIN A M
Sbjct: 27 TTTATKSFEKCISLPTQQASIAWTYHPHNATLDLCFFGTFISPSGWVGWGINPDSPAQMT 86
Query: 89 GSSVFIA-----------------SQINXXXXXXXXXXXXXXXLESFSPSLRNGTLRFDV 131
GS V IA S + L S S SL G +
Sbjct: 87 GSRVLIAFPDPNSGQLILLPYVLDSSVKLQKGPLLSRPLDLVRLSSSSASLYGGKM---- 142
Query: 132 PAPPAAEYSAGAYTIYATVALPGNSTTQNMVWQAGP-VRGGAIAMHPTTGANLRSTKKHD 190
A + + IYA+V L N+T + VW G V+G + +HPTT +L S D
Sbjct: 143 ----ATIRNGASVQIYASVKLSSNNTKIHHVWNRGLYVQGYSPTIHPTTSTDLSSFSTFD 198
Query: 191 FTS 193
TS
Sbjct: 199 VTS 201
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.317 0.129 0.404
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 3,576,621
Number of extensions: 128119
Number of successful extensions: 247
Number of sequences better than 1.0e-05: 9
Number of HSP's gapped: 235
Number of HSP's successfully gapped: 9
Length of query: 193
Length of database: 11,106,569
Length adjustment: 93
Effective length of query: 100
Effective length of database: 8,556,881
Effective search space: 855688100
Effective search space used: 855688100
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 109 (46.6 bits)