Os01g0895300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Cytochrome b561 / ferric reductase transmembrane domain containing protein.
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Os01g0895300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Cytochrome b561 / ferric reductase transmembrane domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 247.95 | 0.74 | 9.81 | -1.45 | 2.56 | -1.87 | 0.407 | -3.63 | -0.276 | 16.4 | 9.554 | 8 | -- | -- |
| 256.86 | 0.746 | 9.75 | -0.966 | 2.52 | -1.85 | -0.482 | -- | -0.149 | 16.4 | 3.784 | 6 | -- | -- |
| 248.31 | 0.734 | 9.81 | -1.42 | 2.56 | -1.85 | -- | -3.32 | -0.267 | 16.4 | 8.941 | 7 | -- | -- |
| 257.49 | 0.747 | 9.75 | -0.961 | 2.54 | -1.89 | -- | -- | -0.143 | 16.4 | 2.43 | 7 | -- | -- |
| 502.24 | 1.04 | 9.88 | -2.04 | -- | 1.09 | -- | -2.79 | -0.724 | -- | -60.45 | 269 | -- | -- |
| 289.64 | 0.798 | 9.81 | -1.33 | 2.1 | -- | -0.859 | -- | -0.405 | 16.9 | -- | -- | -- | -- |
| 291.54 | 0.8 | 9.81 | -1.33 | 2.09 | -- | -- | -- | -0.409 | 16.9 | -- | -- | -- | -- |
| 507.31 | 1.05 | 9.82 | -1.61 | -- | 1.01 | -- | -- | -0.6 | -- | -50.48 | 282 | -- | -- |
| 279.54 | 0.779 | 9.72 | -- | 2.67 | -2.36 | -- | -- | 0.0215 | 16.3 | 12.21 | 12 | -- | -- |
| 522.57 | 1.07 | 9.79 | -1.41 | -- | -- | -- | -- | -0.463 | -- | -- | -- | -- | -- |
| 338.03 | 0.86 | 9.78 | -- | 2.12 | -- | -- | -- | -0.261 | 16.9 | -- | -- | -- | -- |
| 571.13 | 1.11 | 9.77 | -- | -- | 0.47 | -- | -- | -0.36 | -- | -34.36 | 279 | -- | -- |
| 574.67 | 1.12 | 9.76 | -- | -- | -- | -- | -- | -0.307 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 243.05 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 17 | 22 |
| 3 | 244.41 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 12 | 1 |
| 4 | 244.69 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 23 | 1 |
| 5 | 245.68 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 8 | 246.25 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 24 | 1 |
| 11 | 246.55 | temperature | 15.0 | 90 | > th | dose dependent | rect. | 19 | 23 |
| 13 | 246.98 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 17 | 23 |
| 15 | 247.40 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 7 | 21 |
| 23 | 248.02 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 5 | 23 |
| 27 | 248.12 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 28 | 248.18 | temperature | 10.0 | 10 | > th | dose dependent | no | NA | NA |
| 38 | 248.81 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 23 | 23 |
| 49 | 249.09 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 11 | 23 |
| 51 | 249.16 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 20 | 3 |
| 52 | 249.19 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 60 | 249.45 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 23 | 23 |
| 66 | 249.61 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 20 | 3 |
| 69 | 249.74 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 17 | 9 |
| 72 | 249.78 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 7 | 17 |
| 74 | 249.84 | temperature | 10.0 | 1440 | > th | dose dependent | rect. | 24 | 1 |
| 96 | 250.15 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 1 | 1 |
| 97 | 250.16 | wind | 5.0 | 4320 | > th | dose dependent | rect. | 20 | 7 |
| 110 | 250.31 | wind | 7.0 | 4320 | < th | dose independent | rect. | 20 | 8 |
| 115 | 250.36 | wind | 7.0 | 4320 | > th | dose independent | rect. | 20 | 8 |
| 116 | 250.38 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 20 | 6 |
| 122 | 250.40 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 17 | 5 |
| 128 | 250.44 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 145 | 250.59 | wind | 9.0 | 14400 | > th | dose independent | rect. | 10 | 3 |
| 169 | 250.93 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 13 | 10 |
| 170 | 250.94 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 16 | 7 |
| 171 | 250.95 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 15 | 8 |
| 179 | 250.98 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 13 | 10 |
| 193 | 251.10 | temperature | 25.0 | 1440 | < th | dose dependent | sin | 15 | NA |
| 206 | 251.23 | wind | 7.0 | 4320 | > th | dose independent | rect. | 20 | 5 |
| 210 | 251.27 | wind | 7.0 | 4320 | < th | dose independent | rect. | 20 | 5 |
| 212 | 251.31 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 213 | 251.31 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 216 | 251.32 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 15 | 23 |
| 232 | 251.49 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 11 | 17 |
| 244 | 251.55 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 9 | 23 |
| 249 | 251.61 | temperature | 25.0 | 270 | < th | dose independent | rect. | 11 | 22 |
| 252 | 251.62 | wind | 9.0 | 14400 | > th | dose independent | rect. | 6 | 7 |
| 253 | 251.63 | atmosphere | 995.0 | 14400 | < th | dose independent | rect. | 15 | 1 |
| 260 | 251.64 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 1 | 23 |
| 280 | 251.74 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 15 | 1 |
| 304 | 251.85 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 8 | 9 |
| 306 | 251.88 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 14 | 3 |
| 347 | 252.09 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 21 | 23 |
| 348 | 252.10 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 11 | 6 |
| 359 | 252.14 | wind | 9.0 | 14400 | > th | dose independent | rect. | 12 | 1 |
| 397 | 252.18 | atmosphere | 995.0 | 14400 | < th | dose dependent | rect. | 15 | 3 |
| 399 | 252.20 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 8 | 13 |
| 403 | 252.20 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 13 | 23 |
| 447 | 252.28 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 3 | 23 |
| 478 | 252.33 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 14 | 6 |
| 538 | 252.57 | wind | 9.0 | 14400 | < th | dose independent | rect. | 10 | 3 |
| 561 | 252.70 | temperature | 30.0 | 10 | < th | dose dependent | no | NA | NA |
| 573 | 252.78 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 15 | 23 |
| 585 | 252.87 | temperature | 25.0 | 270 | < th | dose independent | rect. | 24 | 23 |
| 586 | 252.87 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 21 | 4 |
| 595 | 252.89 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 20 | 2 |
| 599 | 252.90 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 9 | 23 |
| 602 | 252.92 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 11 | 23 |
| 603 | 252.93 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 6 | 8 |
| 610 | 252.98 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 20 | 20 |
| 613 | 252.99 | wind | 3.0 | 14400 | > th | dose independent | rect. | 1 | 1 |
| 638 | 253.12 | temperature | 25.0 | 270 | < th | dose independent | rect. | 21 | 23 |
| 640 | 253.12 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 11 | 23 |
| 650 | 253.17 | wind | 5.0 | 4320 | > th | dose dependent | rect. | 20 | 1 |
| 671 | 253.27 | wind | 9.0 | 14400 | < th | dose independent | rect. | 6 | 7 |
| 674 | 253.30 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 20 | 10 |
| 685 | 253.38 | wind | 7.0 | 4320 | > th | dose independent | rect. | 20 | 2 |
| 748 | 253.69 | wind | 3.0 | 14400 | < th | dose independent | rect. | 1 | 1 |
| 760 | 253.78 | wind | 7.0 | 4320 | < th | dose independent | rect. | 20 | 2 |
| 764 | 253.82 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 21 | 6 |
| 770 | 253.86 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 13 | 17 |
| 791 | 253.96 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 23 | 1 |
| 795 | 254.01 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 11 | 16 |
| 845 | 254.16 | wind | 9.0 | 14400 | < th | dose independent | rect. | 12 | 1 |
| 893 | 254.35 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 20 | 10 |
| 900 | 254.37 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 17 | 23 |
| 923 | 254.47 | humidity | 80.0 | 14400 | < th | dose dependent | rect. | 5 | 2 |
| 938 | 254.54 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 16 | 20 |
| 981 | 254.69 | temperature | 20.0 | 1440 | > th | dose independent | sin | 12 | NA |