BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os08g0485000 Os08g0485000|AK073011
(153 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os08g0485000 Similar to Phi-1 protein 283 4e-77
Os06g0219900 Similar to Phi-1 protein 209 5e-55
Os02g0756800 Phosphate-induced protein 1 conserved region f... 204 2e-53
Os06g0220000 Similar to Phi-1 protein 199 5e-52
Os02g0756600 Similar to Phi-1 protein 197 2e-51
Os02g0757100 Similar to Phi-1 protein 195 1e-50
Os02g0756200 Similar to Phi-1 protein 183 4e-47
Os06g0220200 174 2e-44
Os06g0220300 Similar to Phi-1 protein 157 3e-39
Os10g0376400 156 5e-39
Os07g0496700 Phosphate-induced protein 1 conserved region f... 93 8e-20
Os06g0133600 Phosphate-induced protein 1 conserved region f... 89 2e-18
>Os08g0485000 Similar to Phi-1 protein
Length = 153
Score = 283 bits (723), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 141/153 (92%), Positives = 141/153 (92%)
Query: 1 LLXXXXXXXXXXXXTRGRGRFAYAWVGNAAEQCPGECAWPFHQPAYGPQAPPLVSPNADV 60
LL TRGRGRFAYAWVGNAAEQCPGECAWPFHQPAYGPQAPPLVSPNADV
Sbjct: 1 LLAVDAAATASPAATRGRGRFAYAWVGNAAEQCPGECAWPFHQPAYGPQAPPLVSPNADV 60
Query: 61 GMDGIIINLATLLAGAVTNPYGGGYFQGPTEAPLEAVTACTGMFGAGAYPGYPGQLPVDA 120
GMDGIIINLATLLAGAVTNPYGGGYFQGPTEAPLEAVTACTGMFGAGAYPGYPGQLPVDA
Sbjct: 61 GMDGIIINLATLLAGAVTNPYGGGYFQGPTEAPLEAVTACTGMFGAGAYPGYPGQLPVDA 120
Query: 121 ATGASYNAVGVAGRRFLLPAMWDPKTSQCSTLV 153
ATGASYNAVGVAGRRFLLPAMWDPKTSQCSTLV
Sbjct: 121 ATGASYNAVGVAGRRFLLPAMWDPKTSQCSTLV 153
>Os06g0219900 Similar to Phi-1 protein
Length = 314
Score = 209 bits (533), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 96/136 (70%), Positives = 114/136 (83%)
Query: 18 RGRFAYAWVGNAAEQCPGECAWPFHQPAYGPQAPPLVSPNADVGMDGIIINLATLLAGAV 77
R R+AY W GN A+QCPG+CAWPFHQP YGPQAPPLV PN DVG+DG++I+LA LLAG V
Sbjct: 179 RARYAYLWAGNPAQQCPGQCAWPFHQPVYGPQAPPLVPPNGDVGVDGMVISLAALLAGTV 238
Query: 78 TNPYGGGYFQGPTEAPLEAVTACTGMFGAGAYPGYPGQLPVDAATGASYNAVGVAGRRFL 137
TNP+G GY+QG A +EA TAC G+FG+GA+PGYPG+L D TGASYNAVG+AGR++L
Sbjct: 239 TNPFGDGYYQGDAGAGMEAATACAGVFGSGAFPGYPGKLLKDPVTGASYNAVGLAGRKYL 298
Query: 138 LPAMWDPKTSQCSTLV 153
LPA+WDP TSQC TLV
Sbjct: 299 LPALWDPTTSQCKTLV 314
>Os02g0756800 Phosphate-induced protein 1 conserved region family protein
Length = 328
Score = 204 bits (520), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 92/139 (66%), Positives = 114/139 (82%)
Query: 15 TRGRGRFAYAWVGNAAEQCPGECAWPFHQPAYGPQAPPLVSPNADVGMDGIIINLATLLA 74
+ + R AY WVGN+A QCPG+CAWPFHQP YGPQ P LV P+ DVGMDG+++N+A+++A
Sbjct: 190 SNAKARTAYVWVGNSATQCPGQCAWPFHQPVYGPQTPALVPPSGDVGMDGMVMNIASMVA 249
Query: 75 GAVTNPYGGGYFQGPTEAPLEAVTACTGMFGAGAYPGYPGQLPVDAATGASYNAVGVAGR 134
G VTNP+G G++QGP EAPLEA TAC G++G+GAYPGY G L VD ATGASYNA G GR
Sbjct: 250 GVVTNPFGDGFYQGPKEAPLEAATACPGVYGSGAYPGYAGNLAVDPATGASYNANGAHGR 309
Query: 135 RFLLPAMWDPKTSQCSTLV 153
++LLPA++DP TS CSTLV
Sbjct: 310 KYLLPALFDPATSTCSTLV 328
>Os06g0220000 Similar to Phi-1 protein
Length = 283
Score = 199 bits (507), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 94/136 (69%), Positives = 112/136 (82%)
Query: 18 RGRFAYAWVGNAAEQCPGECAWPFHQPAYGPQAPPLVSPNADVGMDGIIINLATLLAGAV 77
R AYAWVGN+A QCPG+CAWPFHQP YGPQA PLV P+ DVGMDG++IN+A+++AGAV
Sbjct: 148 RAGAAYAWVGNSATQCPGQCAWPFHQPVYGPQAAPLVPPSGDVGMDGMVINVASMVAGAV 207
Query: 78 TNPYGGGYFQGPTEAPLEAVTACTGMFGAGAYPGYPGQLPVDAATGASYNAVGVAGRRFL 137
TNP+G G++QG A LEA TACTG++G GAYPGY G L VD ATGASYNA G GR++L
Sbjct: 208 TNPFGDGFYQGERGAALEAATACTGVYGKGAYPGYAGALLVDKATGASYNAHGAHGRKYL 267
Query: 138 LPAMWDPKTSQCSTLV 153
LPA++DP TS CSTLV
Sbjct: 268 LPALFDPDTSACSTLV 283
>Os02g0756600 Similar to Phi-1 protein
Length = 313
Score = 197 bits (501), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 89/132 (67%), Positives = 109/132 (82%)
Query: 22 AYAWVGNAAEQCPGECAWPFHQPAYGPQAPPLVSPNADVGMDGIIINLATLLAGAVTNPY 81
AY WVGN A QCPGECAWPFHQP YGPQ PLV+PN D+G DG+++NLA++LAG VTNP+
Sbjct: 182 AYIWVGNPATQCPGECAWPFHQPMYGPQGAPLVAPNGDIGADGMVMNLASMLAGTVTNPF 241
Query: 82 GGGYFQGPTEAPLEAVTACTGMFGAGAYPGYPGQLPVDAATGASYNAVGVAGRRFLLPAM 141
G GY+QG +APLEA TAC G+FG+GAYPG+ G+L VD ATGASYNA G GR++LLPA+
Sbjct: 242 GDGYYQGSRDAPLEAATACPGVFGSGAYPGFAGELKVDQATGASYNANGANGRKYLLPAL 301
Query: 142 WDPKTSQCSTLV 153
++P T C+TLV
Sbjct: 302 YNPSTGTCNTLV 313
>Os02g0757100 Similar to Phi-1 protein
Length = 311
Score = 195 bits (495), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 90/138 (65%), Positives = 110/138 (79%), Gaps = 1/138 (0%)
Query: 16 RGR-GRFAYAWVGNAAEQCPGECAWPFHQPAYGPQAPPLVSPNADVGMDGIIINLATLLA 74
R R GRFAY WVGN A QCPG+CAWP+HQP YGPQA PL PN DVG+DG++I+LA+++
Sbjct: 173 RSRAGRFAYVWVGNPATQCPGQCAWPYHQPVYGPQAAPLTPPNGDVGVDGMVISLASMIV 232
Query: 75 GAVTNPYGGGYFQGPTEAPLEAVTACTGMFGAGAYPGYPGQLPVDAATGASYNAVGVAGR 134
G VTNP+G G+FQG +APLEA TAC G++G GAYPGY G L VD A+GASYNA G GR
Sbjct: 233 GTVTNPFGNGFFQGDADAPLEAATACAGVYGKGAYPGYAGSLLVDPASGASYNANGAHGR 292
Query: 135 RFLLPAMWDPKTSQCSTL 152
++L+PA+ DP TS CST+
Sbjct: 293 KYLVPALVDPDTSACSTV 310
>Os02g0756200 Similar to Phi-1 protein
Length = 308
Score = 183 bits (465), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 83/131 (63%), Positives = 107/131 (81%)
Query: 23 YAWVGNAAEQCPGECAWPFHQPAYGPQAPPLVSPNADVGMDGIIINLATLLAGAVTNPYG 82
+ WVGN+A+QCPG+CAWPF QP YGPQ PLV+PN DVG DG+++ LA+++AG VTNPYG
Sbjct: 178 HIWVGNSAKQCPGQCAWPFAQPVYGPQGTPLVAPNNDVGADGMVMILASMVAGTVTNPYG 237
Query: 83 GGYFQGPTEAPLEAVTACTGMFGAGAYPGYPGQLPVDAATGASYNAVGVAGRRFLLPAMW 142
G++QGP +APLEA +AC G++G+GAYPG G+L VDA TGASYNA G R++LLPA++
Sbjct: 238 DGFYQGPQDAPLEACSACPGVYGSGAYPGNAGKLLVDATTGASYNANGANRRKYLLPALY 297
Query: 143 DPKTSQCSTLV 153
+P TS C TLV
Sbjct: 298 NPATSSCDTLV 308
>Os06g0220200
Length = 305
Score = 174 bits (441), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 79/131 (60%), Positives = 102/131 (77%)
Query: 21 FAYAWVGNAAEQCPGECAWPFHQPAYGPQAPPLVSPNADVGMDGIIINLATLLAGAVTNP 80
+AYAWVGNA QCPG+CAWPF P YGPQ PL +PN DVG DG+++ LA+ LAGAVTNP
Sbjct: 172 YAYAWVGNAERQCPGQCAWPFAAPPYGPQGSPLGAPNGDVGTDGMVVTLASTLAGAVTNP 231
Query: 81 YGGGYFQGPTEAPLEAVTACTGMFGAGAYPGYPGQLPVDAATGASYNAVGVAGRRFLLPA 140
+G Y+QG +A LEA TAC G++G+G+YPGY G++ VD A G SYNA+G G+RFLLPA
Sbjct: 232 FGDAYYQGDKDAALEACTACAGVYGSGSYPGYAGKVLVDEANGGSYNAIGGGGKRFLLPA 291
Query: 141 MWDPKTSQCST 151
+++P T+ C +
Sbjct: 292 IYNPATTGCCS 302
>Os06g0220300 Similar to Phi-1 protein
Length = 305
Score = 157 bits (397), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 74/127 (58%), Positives = 96/127 (75%), Gaps = 1/127 (0%)
Query: 28 NAAEQCPGECAWPFHQPAYGPQAPP-LVSPNADVGMDGIIINLATLLAGAVTNPYGGGYF 86
+A QCPG+CAWPF +P YGP+ LV PN DVG DG++ LA +LAGAVTNP+G GY+
Sbjct: 179 DAERQCPGQCAWPFAKPPYGPKGEAALVPPNGDVGADGVVATLAGVLAGAVTNPFGDGYY 238
Query: 87 QGPTEAPLEAVTACTGMFGAGAYPGYPGQLPVDAATGASYNAVGVAGRRFLLPAMWDPKT 146
G +A LEA +AC G +G+ +YPGY G++ VD TG SYNAVG GR++LLPA++DP T
Sbjct: 239 LGDKDAALEACSACAGAYGSDSYPGYAGKVLVDETTGGSYNAVGAHGRKYLLPAVYDPAT 298
Query: 147 SQCSTLV 153
S+C+TLV
Sbjct: 299 SRCTTLV 305
>Os10g0376400
Length = 334
Score = 156 bits (395), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 77/141 (54%), Positives = 93/141 (65%), Gaps = 11/141 (7%)
Query: 23 YAWVGNAAEQCPGECAWPFHQPAYGP-----------QAPPLVSPNADVGMDGIIINLAT 71
+ WVG+A+ QCPG CAWPFH YG L +PN D G+DG++INLA
Sbjct: 193 HVWVGDASAQCPGRCAWPFHAADYGDADAGRHRRAHGHDVALRAPNGDAGVDGVVINLAA 252
Query: 72 LLAGAVTNPYGGGYFQGPTEAPLEAVTACTGMFGAGAYPGYPGQLPVDAATGASYNAVGV 131
L+AGAVTNPYG GYFQG AP+E AC G++G GAYPGYPG + VDAATGA YN VG
Sbjct: 253 LMAGAVTNPYGRGYFQGDAAAPVEVAGACPGVYGRGAYPGYPGAVRVDAATGAGYNVVGR 312
Query: 132 AGRRFLLPAMWDPKTSQCSTL 152
GRR+L+PA+ DP C +
Sbjct: 313 NGRRYLVPALVDPDNYSCLIM 333
>Os07g0496700 Phosphate-induced protein 1 conserved region family protein
Length = 327
Score = 92.8 bits (229), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 60/131 (45%), Positives = 74/131 (56%), Gaps = 4/131 (3%)
Query: 23 YAWVGNAAEQCPGECAWPFHQPAYGPQA---PPLVSPNADVGMDGIIINLATLLAGAVTN 79
YAWVGN+A QCPG+CA+PF P YG A L PN DVG+DG++I L LA TN
Sbjct: 190 YAWVGNSATQCPGKCAYPFAAPDYGGGAGGQQVLRPPNGDVGVDGMVIVLGHELAELATN 249
Query: 80 PYGGGYFQGPT-EAPLEAVTACTGMFGAGAYPGYPGQLPVDAATGASYNAVGVAGRRFLL 138
P ++ G T AP E C G++G G G AA GASYN GV GRRF++
Sbjct: 250 PLVNAWYAGDTPTAPTEIADLCLGVYGDGGGAGGLVGNVSRAADGASYNVNGVNGRRFMV 309
Query: 139 PAMWDPKTSQC 149
+W+P C
Sbjct: 310 QWLWNPVRGAC 320
>Os06g0133600 Phosphate-induced protein 1 conserved region family protein
Length = 348
Score = 88.6 bits (218), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/134 (42%), Positives = 77/134 (57%), Gaps = 10/134 (7%)
Query: 23 YAWVGNAAEQCPGECAWPFHQPAY-----GPQAPPLVSPNADVGMDGIIINLATLLAGAV 77
YAWVGN+A +CP CA+PF P+Y +APP N DVG+DG++ +A LA
Sbjct: 212 YAWVGNSAARCPEVCAYPFAIPSYVGGGRRAEAPP----NGDVGVDGMVSVIAHELAELA 267
Query: 78 TNPYGGGYFQGPTEA-PLEAVTACTGMFGAGAYPGYPGQLPVDAATGASYNAVGVAGRRF 136
+NP ++ G + P E C G++G G Y GQL D +GASYN GV GR+F
Sbjct: 268 SNPLANAWYAGEDPSFPTEIADLCEGIYGTGGGGAYTGQLLTDGRSGASYNVNGVGGRKF 327
Query: 137 LLPAMWDPKTSQCS 150
L+ +W+P S CS
Sbjct: 328 LVQWVWNPILSYCS 341
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.319 0.138 0.455
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 5,989,248
Number of extensions: 276077
Number of successful extensions: 755
Number of sequences better than 1.0e-10: 13
Number of HSP's gapped: 748
Number of HSP's successfully gapped: 13
Length of query: 153
Length of database: 17,035,801
Length adjustment: 92
Effective length of query: 61
Effective length of database: 12,232,113
Effective search space: 746158893
Effective search space used: 746158893
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 151 (62.8 bits)