Os06g0133600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Phosphate-induced protein 1 conserved region family protein.
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Os06g0133600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Phosphate-induced protein 1 conserved region family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 192.25 | 0.651 | 10.8 | -1.07 | 2.49 | 1.57 | -0.49 | -0.481 | -0.0775 | 12.9 | 84 | 1314 | -- | -- |
| 191.63 | 0.645 | 10.8 | -1.07 | 2.56 | 1.57 | -0.446 | -- | -0.0598 | 12.8 | 82.45 | 1249 | -- | -- |
| 192.4 | 0.646 | 10.8 | -1.06 | 2.55 | 1.57 | -- | -0.289 | -0.0762 | 12.9 | 82.41 | 1261 | -- | -- |
| 192.46 | 0.646 | 10.8 | -1.08 | 2.57 | 1.59 | -- | -- | -0.0604 | 12.8 | 82.14 | 1243 | -- | -- |
| 373.79 | 0.905 | 10.9 | -0.905 | -- | 2.78 | -- | -1.55 | -0.164 | -- | 94 | 2 | -- | -- |
| 246.37 | 0.736 | 10.8 | -0.803 | 2.29 | -- | -0.715 | -- | -0.101 | 12.8 | -- | -- | -- | -- |
| 248.54 | 0.738 | 10.8 | -0.83 | 2.29 | -- | -- | -- | -0.104 | 12.8 | -- | -- | -- | -- |
| 377.54 | 0.905 | 10.9 | -0.887 | -- | 2.7 | -- | -- | -0.141 | -- | 93.99 | 2 | -- | -- |
| 220.76 | 0.692 | 10.8 | -- | 2.56 | 1.52 | -- | -- | -0.0572 | 12.9 | 125.2 | 1262 | -- | -- |
| 576.52 | 1.12 | 10.9 | -0.913 | -- | -- | -- | -- | -0.146 | -- | -- | -- | -- | -- |
| 266.69 | 0.764 | 10.8 | -- | 2.3 | -- | -- | -- | -0.0119 | 12.8 | -- | -- | -- | -- |
| 398.51 | 0.93 | 10.9 | -- | -- | 2.76 | -- | -- | -0.0662 | -- | 102.6 | 2 | -- | -- |
| 598.52 | 1.14 | 10.8 | -- | -- | -- | -- | -- | -0.0448 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 186.02 | humidity | 60 | 720 | > th | dose dependent | rect. | 17 | 4 |
| 10 | 189.02 | humidity | 70 | 720 | > th | dose dependent | rect. | 19 | 1 |
| 41 | 194.79 | humidity | 50 | 720 | > th | dose dependent | rect. | 15 | 12 |
| 45 | 195.23 | humidity | 90 | 1440 | < th | dose dependent | rect. | 13 | 6 |
| 46 | 195.23 | humidity | 80 | 1440 | < th | dose dependent | rect. | 13 | 20 |
| 51 | 195.32 | humidity | 50 | 1440 | > th | dose dependent | rect. | 11 | 10 |
| 52 | 195.36 | humidity | 90 | 1440 | < th | dose dependent | rect. | 11 | 8 |
| 57 | 195.42 | humidity | 70 | 720 | > th | dose independent | rect. | 14 | 14 |
| 60 | 195.46 | humidity | 80 | 720 | > th | dose independent | rect. | 15 | 6 |
| 82 | 195.88 | humidity | 90 | 1440 | < th | dose dependent | rect. | 15 | 2 |
| 102 | 196.21 | humidity | 80 | 1440 | < th | dose independent | rect. | 6 | 14 |
| 116 | 196.37 | humidity | 80 | 1440 | < th | dose independent | rect. | 6 | 11 |
| 130 | 196.51 | humidity | 80 | 1440 | > th | dose independent | rect. | 6 | 15 |
| 138 | 196.55 | humidity | 90 | 1440 | < th | dose dependent | sin | 20 | NA |
| 140 | 196.55 | humidity | 90 | 1440 | < th | dose dependent | rect. | 2 | 19 |
| 190 | 196.81 | humidity | 80 | 1440 | < th | dose independent | sin | 1 | NA |
| 209 | 196.86 | humidity | 50 | 1440 | > th | dose dependent | sin | 20 | NA |
| 216 | 196.90 | humidity | 80 | 1440 | > th | dose independent | rect. | 6 | 12 |
| 226 | 196.95 | humidity | 90 | 720 | < th | dose dependent | rect. | 17 | 6 |
| 236 | 196.99 | humidity | 80 | 1440 | > th | dose independent | sin | 0 | NA |
| 245 | 197.00 | humidity | 80 | 1440 | < th | dose dependent | sin | 17 | NA |
| 269 | 197.07 | humidity | 60 | 720 | > th | dose dependent | sin | 17 | NA |
| 273 | 197.08 | humidity | 80 | 720 | > th | dose independent | rect. | 10 | 12 |
| 448 | 197.86 | humidity | 70 | 720 | > th | dose independent | rect. | 18 | 9 |
| 458 | 197.90 | humidity | 50 | 1440 | > th | dose dependent | rect. | 3 | 18 |
| 536 | 198.21 | humidity | 80 | 1440 | < th | dose dependent | no | NA | NA |
| 548 | 198.23 | humidity | 80 | 1440 | < th | dose dependent | rect. | 4 | 23 |
| 556 | 198.24 | humidity | 80 | 1440 | < th | dose dependent | rect. | 21 | 23 |
| 579 | 198.29 | humidity | 70 | 720 | > th | dose independent | sin | 13 | NA |
| 746 | 198.75 | humidity | 80 | 720 | < th | dose dependent | rect. | 17 | 15 |
| 757 | 198.78 | humidity | 80 | 1440 | < th | dose dependent | rect. | 18 | 23 |
| 802 | 198.90 | humidity | 50 | 1440 | > th | dose dependent | rect. | 11 | 18 |
| 804 | 198.91 | humidity | 80 | 720 | < th | dose independent | rect. | 12 | 9 |
| 883 | 199.15 | humidity | 70 | 720 | < th | dose independent | sin | 13 | NA |