BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os06g0133600 Os06g0133600|AK105690
(348 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G51550.1 | chr5:20939793-20940806 REVERSE LENGTH=338 385 e-107
AT2G17230.1 | chr2:7494892-7495983 REVERSE LENGTH=364 345 3e-95
AT2G35150.1 | chr2:14817220-14818191 REVERSE LENGTH=324 299 2e-81
AT4G08950.1 | chr4:5740378-5741322 FORWARD LENGTH=315 144 9e-35
AT1G35140.1 | chr1:12852089-12853018 FORWARD LENGTH=310 142 2e-34
AT5G64260.1 | chr5:25703980-25704897 FORWARD LENGTH=306 138 5e-33
AT5G09440.1 | chr5:2938397-2939233 FORWARD LENGTH=279 114 5e-26
AT3G02970.1 | chr3:669217-670495 REVERSE LENGTH=333 79 3e-15
>AT5G51550.1 | chr5:20939793-20940806 REVERSE LENGTH=338
Length = 337
Score = 385 bits (990), Expect = e-107, Method: Compositional matrix adjust.
Identities = 187/316 (59%), Positives = 236/316 (74%), Gaps = 13/316 (4%)
Query: 33 NGSGEVEGIGASKKFEGSSDFVKLQYHMGPVLAADITVHPIWYGRWPAEQKRTIRAFLRS 92
NGS ++ ASKKFEGSS+ V+L+YHMGPVL +ITVHPIWYG W QK+ IR F+ S
Sbjct: 34 NGSDQI--FDASKKFEGSSNLVRLRYHMGPVLTNNITVHPIWYGTWQKSQKKIIREFINS 91
Query: 93 LXXXXXXXXXXXXXXXXVAAWWRTVRLYTDQTSANVSGVVRLGREKCDARASRGGRLTRL 152
+ V+ WW+TV+LYTDQT +N++G VRLG EK D S G LTRL
Sbjct: 92 ISAVGSKHPS-------VSGWWKTVQLYTDQTGSNITGTVRLGEEKNDRFYSHGKSLTRL 144
Query: 153 DIQSVVRDAVTARTRPLPVD-SSGVYLVLTSPEVVVENFCGQVCGFHYFTFPSVVGYTLP 211
IQSV++ AVT+R+RPLPV+ SG+YL+LT+ +V V++FCGQVCGFHYFTFPS+VG+TLP
Sbjct: 145 SIQSVIKSAVTSRSRPLPVNPKSGLYLLLTADDVYVQDFCGQVCGFHYFTFPSIVGFTLP 204
Query: 212 YAWVGNSAARCPEVCAYPFAIPSYVGGGRRAEAPPNGDVGVDGMVSVIAHELAELASNPL 271
YAWVGNSA CP VCAYPFA+P+++ G + ++ PNGDVGVDGM+SVIAHE+AELA+NPL
Sbjct: 205 YAWVGNSAKLCPGVCAYPFAVPAFIPGLKPVKS-PNGDVGVDGMISVIAHEIAELATNPL 263
Query: 272 ANAWYAGEDPSFPTEIADLCEXXXXXXXXXXXXXQLLTDGRSGASYNVNGVGGRKFLVQW 331
NAWYAG DP P EIADLCE Q+L D SGA+YNVNG+ R++L+QW
Sbjct: 264 VNAWYAGPDPVAPVEIADLCEGIYGTGGGGSYTGQMLND-HSGATYNVNGI-RRRYLIQW 321
Query: 332 VWNPILSYCSGPNALD 347
+W+ ++SYC+GPNALD
Sbjct: 322 LWSHVVSYCTGPNALD 337
>AT2G17230.1 | chr2:7494892-7495983 REVERSE LENGTH=364
Length = 363
Score = 345 bits (884), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 173/310 (55%), Positives = 212/310 (68%), Gaps = 13/310 (4%)
Query: 41 IGASKKFEGSSDFVKLQYHMGPVLAAD-ITVHPIWYGRWPAEQKRTIRAFLRSLXXXXXX 99
+ +SKKFEGSS+ V L+YHMGPVL++ I ++ IWYG+W K IR FL S+
Sbjct: 64 LTSSKKFEGSSNLVHLRYHMGPVLSSSPINIYVIWYGQWSRPHKSLIRDFLNSISDAKAP 123
Query: 100 XXXXXXXXXXVAAWWRTVRLYTDQTSANVSGVVRLGREKCDARASRGGRLTRLDIQSVVR 159
V+ WWRT LYTDQT +NVS V + E D++ S G LTRL IQ V+
Sbjct: 124 SPS-------VSEWWRTASLYTDQTGSNVSRSVLIAGEYSDSKYSHGQHLTRLTIQEVIA 176
Query: 160 DAVTARTRPLPVD-SSGVYLVLTSPEVVVENFCGQVCGFHYFTFPSVVGYTLPYAWVGNS 218
A AR+ PVD +G+YLVLTS +V +++FC VCGFHYFTFPS+VGYT+PYAWVG S
Sbjct: 177 SA--ARSASFPVDHKNGMYLVLTSHDVTMQDFCRAVCGFHYFTFPSMVGYTMPYAWVGQS 234
Query: 219 AARCPEVCAYPFAIPSYVGGGRRAEA-PPNGDVGVDGMVSVIAHELAELASNPLANAWYA 277
+CPEVCAYPFA+P Y+G G E PPNG+ GVDGMVSVI HELAE+ SNPL NAWYA
Sbjct: 235 GKQCPEVCAYPFALPGYMGHGGPGELRPPNGETGVDGMVSVIGHELAEVVSNPLINAWYA 294
Query: 278 GEDPSFPTEIADLCEXXXXXXXXXXXXXQLLTDGRSGASYNVNGVGGRKFLVQWVWNPIL 337
GEDP+ PTEI DLCE Q++ D R G ++N+NG GGRKFLVQW+WNP L
Sbjct: 295 GEDPTAPTEIGDLCEGLYGSGGGGGYIGQVMRD-REGKTFNMNGKGGRKFLVQWIWNPNL 353
Query: 338 SYCSGPNALD 347
CSGPN++D
Sbjct: 354 KACSGPNSVD 363
>AT2G35150.1 | chr2:14817220-14818191 REVERSE LENGTH=324
Length = 323
Score = 299 bits (765), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 155/310 (50%), Positives = 204/310 (65%), Gaps = 16/310 (5%)
Query: 44 SKKFEGSSDFVKLQYHMGPVLAADIT-VHPIWYGRWPAEQKRTIRAFLRSLXXXXXXXXX 102
SK +EGSSD V LQYH+GPV+++ +T ++ IWYGRW + IR FL S+
Sbjct: 24 SKNYEGSSDLVDLQYHLGPVISSPVTSLYIIWYGRWNPTHQSIIRDFLYSVSAPAPAQYP 83
Query: 103 XXXXXXXVAAWWRTVRLYTDQTSANVSGVVRLGREKCDARASRGGRLTRLDIQSVVRDAV 162
V+ WW+TVRLY DQT +N++ + L E D+ S G LTR +QSV+R A+
Sbjct: 84 S------VSNWWKTVRLYRDQTGSNITDTLVLSGEFHDSTYSHGSHLTRFSVQSVIRTAL 137
Query: 163 TARTRPLPVDS-SGVYLVLTSPEVVVENFCGQVCGFHYFTFPSVVGYTLPYAWVGNSAAR 221
T++ LP+++ +G+YLVLTS +V ++ FC +CGFHYFTFPSVVG T+PYAWVGNS +
Sbjct: 138 TSK---LPLNAVNGLYLVLTSDDVEMQEFCRAICGFHYFTFPSVVGATVPYAWVGNSERQ 194
Query: 222 CPEVCAYPFAIPS-YVGGG---RRAEAPPNGDVGVDGMVSVIAHELAELASNPLANAWYA 277
CPE+CAYPFA P + G G R PPNG+VG+DGM+SVIAHELAE++SNP+ N WY
Sbjct: 195 CPEMCAYPFAQPKPFPGSGFVAREKMKPPNGEVGIDGMISVIAHELAEVSSNPMLNGWYG 254
Query: 278 GEDPSFPTEIADLCEXXXXXXXXXXXXXQLLTDGRSGASYNVNGVGGRKFLVQWVWNPIL 337
GED + PTEIADLC + D R YNV GV GRK+L+QWVW+
Sbjct: 255 GEDATAPTEIADLCLGVYGSGGGGGYMGSVYKD-RWRNVYNVKGVKGRKYLIQWVWDLNR 313
Query: 338 SYCSGPNALD 347
+ C GPNA++
Sbjct: 314 NRCFGPNAMN 323
>AT4G08950.1 | chr4:5740378-5741322 FORWARD LENGTH=315
Length = 314
Score = 144 bits (362), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 99/295 (33%), Positives = 134/295 (45%), Gaps = 17/295 (5%)
Query: 51 SDFVKLQYHMGPVLAADITVHPIWYGRWPAEQKRTIRAFLRSLXXXXXXXXXXXXXXXXV 110
+ F L+YH G +L+ I+V+ IWYG++ Q+ I F+ SL V
Sbjct: 30 NQFQLLKYHKGALLSGKISVNLIWYGKFKPSQRAIISDFITSLTHTSPTSKTLHQPS--V 87
Query: 111 AAWWRTVRLYTD--QTSANVSGV-VRLGREKCDARASRGGRLTRLDIQSVVRDAVTARTR 167
A WW+T Y S N S + + LG++ D S G LT IQ++
Sbjct: 88 ATWWKTTEKYYKLATPSKNSSPLSLTLGKQIIDESCSLGKSLTDKKIQTLASKGD----- 142
Query: 168 PLPVDSSGVYLVLTSPEVVVENFCGQVCGFH-YFTFPSVVGYTLPYAWVGNSAARCPEVC 226
+ + +VLTS +V V F CG H + G Y WVGNS +CP C
Sbjct: 143 ----QRNAINVVLTSADVTVTGFGMSRCGTHGHARGLGKRGSKFAYIWVGNSETQCPGQC 198
Query: 227 AYPFAIPSYVGGGRRAEAPPNGDVGVDGMVSVIAHELAELASNPLANAWYAGEDPSFPTE 286
A+PF P Y G PN DVG+DGMV +A LA A+NP N +Y G + P E
Sbjct: 199 AWPFHAPVY-GPQSPPLVAPNNDVGLDGMVINLASLLAGTATNPFGNGYYQGPQ-NAPLE 256
Query: 287 IADLCEXXXXXXXXXXXXXQLLTDGRSGASYNVNGVGGRKFLVQWVWNPILSYCS 341
A C LL D +G S+N G GRKFL+ +++P S CS
Sbjct: 257 AASACPGVYGKGAYPGYAGDLLVDTTTGGSFNAYGANGRKFLLPALYDPTTSACS 311
>AT1G35140.1 | chr1:12852089-12853018 FORWARD LENGTH=310
Length = 309
Score = 142 bits (359), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 94/297 (31%), Positives = 138/297 (46%), Gaps = 17/297 (5%)
Query: 48 EGSSDFVKLQYHMGPVLAADITVHPIWYGRWPAEQKRTIRAFLRSLXXXXXXXXXXXXXX 107
+ + D+ QYH G +L D++++ IWYG++ Q+ + F+ SL
Sbjct: 24 DKTQDYTSFQYHKGALLTGDVSINLIWYGKFKPSQRAIVTDFVASL---SSSRRSTMAQN 80
Query: 108 XXVAAWWRTV-RLYTDQTSANVSGV-VRLGREKCDARASRGGRLTRLDIQSVVRDAVTAR 165
VA WW+TV + Y + G+ + LG + D S G LT +++ +
Sbjct: 81 PSVATWWKTVEKYYQFRKMTTTRGLSLSLGEQILDQGYSMGKSLTEKNLKDLAAKG---- 136
Query: 166 TRPLPVDSSGVYLVLTSPEVVVENFCGQVCGFHYFTFPSVVGYT-LPYAWVGNSAARCPE 224
S V +VLTS +V V+ FC CG H S + Y WVGNS +CP
Sbjct: 137 -----GQSYAVNVVLTSADVTVQGFCMNRCGSHGTGSGSGKKGSRFAYIWVGNSETQCPG 191
Query: 225 VCAYPFAIPSYVGGGRRAEAPPNGDVGVDGMVSVIAHELAELASNPLANAWYAGEDPSFP 284
CA+PF P Y G PN DVG+DGMV +A +A A+NP + +Y G + P
Sbjct: 192 QCAWPFHAPVY-GPQSPPLVAPNNDVGLDGMVINLASLMAATATNPFGDGYYQGPKTA-P 249
Query: 285 TEIADLCEXXXXXXXXXXXXXQLLTDGRSGASYNVNGVGGRKFLVQWVWNPILSYCS 341
E C +LL D +G SYNV G+ GRK+L+ +++P CS
Sbjct: 250 LEAGSACTGVYGKGSYPGYAGELLVDATTGGSYNVKGLNGRKYLLPALFDPKTDSCS 306
>AT5G64260.1 | chr5:25703980-25704897 FORWARD LENGTH=306
Length = 305
Score = 138 bits (347), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 92/287 (32%), Positives = 130/287 (45%), Gaps = 20/287 (6%)
Query: 56 LQYHMGPVLAADITVHPIWYGRWPAEQKRTIRAFLRSLXXXXXXXXXXXXXXXXVAAWWR 115
++YH G +L +ITV+ +WYG++ Q+ I F+ SL VA+WW+
Sbjct: 33 MKYHNGVLLKGNITVNLVWYGKFTPIQRSVIVDFIHSLNSKDVASSAAVPS---VASWWK 89
Query: 116 TVRLYTDQTSANVSGVVRLGREKCDARASRGGRLTRLDIQSVVRDAVTARTRPLPVDSSG 175
T Y +S V G L ++ + L L + L
Sbjct: 90 TTEKYKGGSSTLVVGKQLLLENYPLGKSLKNPYLRALSTK-------------LNGGLRS 136
Query: 176 VYLVLTSPEVVVENFCGQVCGFH--YFTFPSVVGYTLPYAWVGNSAARCPEVCAYPFAIP 233
+ +VLT+ +V VE FC CG H + P Y WVGNS +CP CA+PF P
Sbjct: 137 ITVVLTAKDVTVERFCMSRCGTHGSSGSNPRRAANGAAYVWVGNSETQCPGYCAWPFHQP 196
Query: 234 SYVGGGRRAEAPPNGDVGVDGMVSVIAHELAELASNPLANAWYAGEDPSFPTEIADLCEX 293
Y G PNGDVGVDGM+ +A LA +NP N +Y G P+ P E C
Sbjct: 197 IY-GPQTPPLVAPNGDVGVDGMIINLATLLANTVTNPFNNGYYQGP-PTAPLEAVSACPG 254
Query: 294 XXXXXXXXXXXXQLLTDGRSGASYNVNGVGGRKFLVQWVWNPILSYC 340
++L D +G+SYN G+ GRK+L+ +W+P S C
Sbjct: 255 IFGSGSYPGYAGRVLVDKTTGSSYNARGLAGRKYLLPAMWDPQSSTC 301
>AT5G09440.1 | chr5:2938397-2939233 FORWARD LENGTH=279
Length = 278
Score = 114 bits (286), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 88/277 (31%), Positives = 120/277 (43%), Gaps = 34/277 (12%)
Query: 64 LAADITVHPIWYGRWPAEQKRTIRAFLRSLXXXXXXXXXXXXXXXXVAAWWRTVRLYTDQ 123
L +IT++ IWYG++ Q+ I F+RS+ VA+WW+T Y
Sbjct: 32 LNGNITLNLIWYGKFTPIQRSIIVDFIRSISSVTAAKGPS------VASWWKTTEKYKTG 85
Query: 124 TSANVSGVVRLGREKCDARASRGGRLTRLDIQSVVRDAVTARTRPLPVDSSGVYLVLTSP 183
S V G L ++ + L L + +A AR+ + +VLT+
Sbjct: 86 VSTLVVGKQLLLENYPLGKSLKSPYLRALSSK---LNAGGARS---------ITVVLTAK 133
Query: 184 EVVVENFCGQVCGFHYFTFPSVVGYTLPYAWVGNSAARCPEVCAYPFAIPSYVGGGRRAE 243
+V VE C CG H SV + Y WVGNS +CP CA+PF P Y G
Sbjct: 134 DVTVEGLCMNRCGTHGSKSSSV--NSGAYVWVGNSETQCPGYCAWPFHQPIY-GPQSPPL 190
Query: 244 APPNGDVGVDGMVSVIAHELAELASNPLANAWYAGEDPSFPTEIADLCEXXXXXXXXXXX 303
PNGDVGVDGM+ IA L +NP E C
Sbjct: 191 VAPNGDVGVDGMIINIATLLVNTVTNP-------------SPEAVSACTGIFGSGAYPGY 237
Query: 304 XXQLLTDGRSGASYNVNGVGGRKFLVQWVWNPILSYC 340
++L D SGASYN G+ GRK+L+ +W+P S C
Sbjct: 238 AGRVLVDKTSGASYNALGLAGRKYLLPALWDPQTSTC 274
>AT3G02970.1 | chr3:669217-670495 REVERSE LENGTH=333
Length = 332
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 73/303 (24%), Positives = 119/303 (39%), Gaps = 47/303 (15%)
Query: 73 IWYGRWPAEQKRTIRAFLRSLXXXXXXXXXXXXXXXXVAAWWRTVRLYTD---------Q 123
+WYG++ QK + F+ SL V+AWW+ V Y + Q
Sbjct: 44 LWYGQFTPTQKERVHDFIESLNFDAKEGLDPK-----VSAWWKVVESYQERFEVKDIYRQ 98
Query: 124 TSANVSGV----VRLGREKCDARASRGGRLTRLDIQSVVRDAVTARTRPLPVDSSGVYLV 179
+N + V++ R D + G LT + + +V A+ ++ +PV V
Sbjct: 99 KKSNRTVAPRIKVKVVRSYVDEKMKYGKELTMGNGEKLVETAIGNMSKVVPV-------V 151
Query: 180 LTSPEVVVEN--FCGQVCGFHYFTFPSVVGYTLP--YAWVGNSAARCPEVCAYPFAIPSY 235
L S +V FC C + + G P Y V N CP CA+PF
Sbjct: 152 LLSAQVRAHGVGFCDGTC--QHNALAKIKGQKEPRRYIMVSNPEVECPGECAWPFHTADK 209
Query: 236 VGGGRRAEAPPNGDVGVDGMVSVIAHELAELASNP-LANAWYAGEDPSFPTEI------- 287
G + P +G+VG D +V +A LA+LA+NP L + + E + ++
Sbjct: 210 GPRGMTYQ-PASGEVGADALVIQLATGLADLATNPDLTKSLFKSETTPYNDDVKKNHESS 268
Query: 288 -------ADLCEXXXXXXXXXXXXXQLLTDGRSGASYNVNGVGGRKFLVQWVWNPILSYC 340
A C ++ D +G ++N +G+ KFL+ +W+P C
Sbjct: 269 SMYIVDPATKCTRVFGSGAFPGFTGRIRVDPITGGAFNSHGINHLKFLIPSIWDPKTKSC 328
Query: 341 SGP 343
P
Sbjct: 329 WTP 331
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.321 0.136 0.438
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 6,695,501
Number of extensions: 247887
Number of successful extensions: 483
Number of sequences better than 1.0e-05: 8
Number of HSP's gapped: 445
Number of HSP's successfully gapped: 8
Length of query: 348
Length of database: 11,106,569
Length adjustment: 99
Effective length of query: 249
Effective length of database: 8,392,385
Effective search space: 2089703865
Effective search space used: 2089703865
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 112 (47.8 bits)