BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os07g0576500 Os07g0576500|AK106839
(622 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os07g0576500 Similar to Indole-3-acetic acid-amido syntheta... 1085 0.0
Os07g0592600 Similar to Indole-3-acetic acid-amido syntheta... 724 0.0
Os01g0764800 Similar to Nt-gh3 deduced protein 588 e-168
Os05g0500900 Similar to Indole-3-acetic acid-amido syntheta... 503 e-142
Os01g0785400 GH3 auxin-responsive promoter family protein 500 e-141
Os06g0499500 Similar to Indole-3-acetic acid-amido syntheta... 344 1e-94
Os11g0186500 303 3e-82
Os05g0586200 GH3 auxin-responsive promoter family protein 303 3e-82
Os11g0528700 Similar to Indole-3-acetic acid-amido syntheta... 273 4e-73
Os07g0576232 267 1e-71
Os07g0576166 234 2e-61
Os05g0143800 GH3 auxin-responsive promoter family protein 196 5e-50
Os11g0528600 Similar to Indole-3-acetic acid-amido syntheta... 193 3e-49
Os01g0221100 GH3 auxin-responsive promoter family protein 169 8e-42
Os07g0671500 Similar to Indole-3-acetic acid-amido syntheta... 110 4e-24
>Os07g0576500 Similar to Indole-3-acetic acid-amido synthetase GH3.4 (EC 6.3.2.-)
(Auxin- responsive GH3-like protein 4) (AtGH3-4)
(CF4-like protein)
Length = 622
Score = 1085 bits (2807), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 537/549 (97%), Positives = 537/549 (97%)
Query: 74 AGGVVRRPEAVHXXXXXXXXXXXXIDAPHHRVPHQLRHVGRRVQADTRRHGRLRPPPGTA 133
AGGVVRRPEAVH IDAPHHRVPHQLRHVGRRVQADTRRHGRLRPPPGTA
Sbjct: 74 AGGVVRRPEAVHPARRRRGLLARPIDAPHHRVPHQLRHVGRRVQADTRRHGRLRPPPGTA 133
Query: 134 RSHWTCLETVSQPLLHGTSPVRRKVISNISQCIYRYVPGLEKGKGLYFMFVKSETKTRGG 193
RSHWTCLETVSQPLLHGTSPVRRKVISNISQCIYRYVPGLEKGKGLYFMFVKSETKTRGG
Sbjct: 134 RSHWTCLETVSQPLLHGTSPVRRKVISNISQCIYRYVPGLEKGKGLYFMFVKSETKTRGG 193
Query: 194 LTAWFALTSVYKSEQFKSMAIAYTSPTAAILCEDAFQSMYAQMVCGLCQRHDVVRFGAVF 253
LTAWFALTSVYKSEQFKSMAIAYTSPTAAILCEDAFQSMYAQMVCGLCQRHDVVRFGAVF
Sbjct: 194 LTAWFALTSVYKSEQFKSMAIAYTSPTAAILCEDAFQSMYAQMVCGLCQRHDVVRFGAVF 253
Query: 254 AAALVRAIRFLQLNWGQLAADIEAGELGPHVADPSVREAVSGILRSDAELAEFVRIECSK 313
AAALVRAIRFLQLNWGQLAADIEAGELGPHVADPSVREAVSGILRSDAELAEFVRIECSK
Sbjct: 254 AAALVRAIRFLQLNWGQLAADIEAGELGPHVADPSVREAVSGILRSDAELAEFVRIECSK 313
Query: 314 GDWAGIITRIWPNTKYVDAIVTGAMAQYIRTLQYYSGGLPIVSTSYASSECFFGINLRPV 373
GDWAGIITRIWPNTKYVDAIVTGAMAQYIRTLQYYSGGLPIVSTSYASSECFFGINLRPV
Sbjct: 314 GDWAGIITRIWPNTKYVDAIVTGAMAQYIRTLQYYSGGLPIVSTSYASSECFFGINLRPV 373
Query: 374 CDPSEVSYTIMPNTAYFEFLPVGEVVDATNLVDLARVEVGREYEVVITTYAGLSRYRVGD 433
CDPSEVSYTIMPNTAYFEFLPVGEVVDATNLVDLARVEVGREYEVVITTYAGLSRYRVGD
Sbjct: 374 CDPSEVSYTIMPNTAYFEFLPVGEVVDATNLVDLARVEVGREYEVVITTYAGLSRYRVGD 433
Query: 434 VLRVTGFHNAAPQFRFVRRQSVLLSVELDKTDEAELHRAVERASSALLRPRGVSVAEYTS 493
VLRVTGFHNAAPQFRFVRRQSVLLSVELDKTDEAELHRAVERASSALLRPRGVSVAEYTS
Sbjct: 434 VLRVTGFHNAAPQFRFVRRQSVLLSVELDKTDEAELHRAVERASSALLRPRGVSVAEYTS 493
Query: 494 RACTERIPGHYVVYWELLTESPVGAGDGDTVDGETLGRCCLEMEEALSAVYRQGRVADGS 553
RACTERIPGHYVVYWELLTESPVGAGDGDTVDGETLGRCCLEMEEALSAVYRQGRVADGS
Sbjct: 494 RACTERIPGHYVVYWELLTESPVGAGDGDTVDGETLGRCCLEMEEALSAVYRQGRVADGS 553
Query: 554 IGPLEIRIVRPGTFEEVMDLAVSRGTSIGQYKVPQCVTVPSVVELLDSRVVSSQFSPALP 613
IGPLEIRIVRPGTFEEVMDLAVSRGTSIGQYKVPQCVTVPSVVELLDSRVVSSQFSPALP
Sbjct: 554 IGPLEIRIVRPGTFEEVMDLAVSRGTSIGQYKVPQCVTVPSVVELLDSRVVSSQFSPALP 613
Query: 614 HWIPTPRSD 622
HWIPTPRSD
Sbjct: 614 HWIPTPRSD 622
>Os07g0592600 Similar to Indole-3-acetic acid-amido synthetase GH3.3 (EC 6.3.2.-)
(Auxin- responsive GH3-like protein 3) (AtGH3-3)
Length = 605
Score = 724 bits (1868), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 365/495 (73%), Positives = 405/495 (81%), Gaps = 27/495 (5%)
Query: 150 GTSPVRRKVISNI------SQCIYR--------YVPGLEKGKGLYFMFVKSETKTRGGLT 195
GTS RK++ I Q +Y YVPGL+KGKGLYF+FVKSETKT GGLT
Sbjct: 116 GTSAGERKLMPTIMDELDRRQLLYSLLMPVMNLYVPGLDKGKGLYFLFVKSETKTPGGLT 175
Query: 196 AWFALTSVYKSEQFKSMAI----AYTSPTAAILCEDAFQSMYAQMVCGLCQRHDVVRFGA 251
A LTS YKS+ FK+ YTSPTAAILC DAFQSMYAQMVCGLCQR+DV+R GA
Sbjct: 176 ARPVLTSYYKSDHFKNRPYDPYHNYTSPTAAILCADAFQSMYAQMVCGLCQRNDVLRLGA 235
Query: 252 VFAAALVRAIRFLQLNWGQLAADIEAGELGPHVADPSVREAVSGILRSDAELAEFVRIEC 311
VFA+ L+RAIRFLQLNW QLA DIE+GEL P V DPSVREAV+ IL D ELA+ +R EC
Sbjct: 236 VFASGLLRAIRFLQLNWEQLADDIESGELTPRVTDPSVREAVAAILLPDPELAKLIRAEC 295
Query: 312 SKGDWAGIITRIWPNTKYVDAIVTGAMAQYIRTLQYYSGGLPIVSTSYASSECFFGINLR 371
SKGDWAGIITR+WPNTKY+D IVTGAMAQYI TL++YSGGLP+ T YASSEC+FG+NLR
Sbjct: 296 SKGDWAGIITRVWPNTKYLDVIVTGAMAQYIPTLEFYSGGLPMACTMYASSECYFGLNLR 355
Query: 372 PVCDPSEVSYTIMPNTAYFEFLPVGEV----VDATNLVDLARVEVGREYEVVITTYAGLS 427
P+CDPSEVSYTIMPN YFEFLPV E DAT LVDLARVEVGREYE+VITTYAGL+
Sbjct: 356 PMCDPSEVSYTIMPNMGYFEFLPVDETGAASGDATQLVDLARVEVGREYELVITTYAGLN 415
Query: 428 RYRVGDVLRVTGFHNAAPQFRFVRRQSVLLSVELDKTDEAELHRAVERASSALLRPRGVS 487
RYRVGDVLRVTGFHNAAPQFRFVRR++VLLS+E DKTDEAEL RAVERA SALLRP G S
Sbjct: 416 RYRVGDVLRVTGFHNAAPQFRFVRRKNVLLSIESDKTDEAELQRAVERA-SALLRPHGAS 474
Query: 488 VAEYTSRACTERIPGHYVVYWELLTESPVGAGDGDTVDGETLGRCCLEMEEALSAVYRQG 547
V EYTS+ACT+RIPGHYV+YWELLT+ GAG VD +TLGRCCLEMEEAL+ VYRQ
Sbjct: 475 VVEYTSQACTKRIPGHYVIYWELLTK---GAG-ATVVDADTLGRCCLEMEEALNTVYRQS 530
Query: 548 RVADGSIGPLEIRIVRPGTFEEVMDLAVSRGTSIGQYKVPQCVTVPSVVELLDSRVVSSQ 607
RVADGSIGPLEIR+VRPGTFEE+MD A+SRG SI QYKVP+CVT P +VELLDSRVVSS
Sbjct: 531 RVADGSIGPLEIRVVRPGTFEELMDYAISRGASINQYKVPRCVTFPPIVELLDSRVVSSH 590
Query: 608 FSPALPHWIPTPRSD 622
FSPALPHW P RS+
Sbjct: 591 FSPALPHWTPARRSE 605
>Os01g0764800 Similar to Nt-gh3 deduced protein
Length = 614
Score = 588 bits (1515), Expect = e-168, Method: Compositional matrix adjust.
Identities = 309/499 (61%), Positives = 362/499 (72%), Gaps = 37/499 (7%)
Query: 150 GTSPVRRKVISNIS------QCIYR--------YVPGLEKGKGLYFMFVKSETKTRGGLT 195
GTS RK++ I Q +Y YVPGL+KGKGLYF+F+KSETKT GGL
Sbjct: 119 GTSAGERKLMPTIEDELDRRQMLYSLLMPVMNLYVPGLDKGKGLYFLFIKSETKTPGGLP 178
Query: 196 AWFALTSVYKSEQFKSMAI----AYTSPTAAILCEDAFQSMYAQMVCGLCQRHDVVRFGA 251
A LTS YKS+ FK YTSPTAAILC DAFQSMYAQM+CGL R +V+R GA
Sbjct: 179 ARPVLTSYYKSDHFKHRPFDPYNVYTSPTAAILCTDAFQSMYAQMLCGLVARAEVLRVGA 238
Query: 252 VFAAALVRAIRFLQLNWGQLAADIEAGELGPHVADPSVREAVSGILRS-DAELAEFVRIE 310
VFA+ L+RAIRFLQL+W +LA DI G L V +PS+R+AV+ +L + DAELA FV E
Sbjct: 239 VFASGLLRAIRFLQLHWRELAHDIRTGTLSAKVTEPSIRDAVAEVLAAPDAELAAFVEAE 298
Query: 311 CSKGDWAGIITRIWPNTKYVDAIVTGAMAQYIRTLQYYSGGLPIVSTSYASSECFFGINL 370
C K W GIITR+WPNTKY+D IVTGAMAQYI TL++YSGGLP+ T YASSEC+FG+NL
Sbjct: 299 CGKDKWEGIITRMWPNTKYLDVIVTGAMAQYIPTLKFYSGGLPMACTMYASSECYFGLNL 358
Query: 371 RPVCDPSEVSYTIMPNTAYFEFLP-------VGEVVDATNLVDLARVEVGREYEVVITTY 423
RP+CDPSEVSYTIMPN YFE +P + LVDLA EVGREYE+VITTY
Sbjct: 359 RPMCDPSEVSYTIMPNMGYFELMPHDPDAPPLPRDAPPPRLVDLADAEVGREYELVITTY 418
Query: 424 AGLSRYRVGDVLRVTGFHNAAPQFRFVRRQSVLLSVELDKTDEAELHRAVERASSALLRP 483
AGL RYRVGD+L+VTGFHNAAPQFRFVRR++VLLS++ DKTDEAEL AVERA SALL P
Sbjct: 419 AGLCRYRVGDILQVTGFHNAAPQFRFVRRKNVLLSIDSDKTDEAELQAAVERA-SALLSP 477
Query: 484 RGVSVAEYTSRACTERIPGHYVVYWELLTES-----PVGAGDGDTVDGETLGRCCLEMEE 538
G S+ EYTS+A IPGHYVVYWEL+ P +G V RCCLEMEE
Sbjct: 478 YGASIVEYTSQADATTIPGHYVVYWELMVREGGAWPPPAEEEGRGV----FERCCLEMEE 533
Query: 539 ALSAVYRQGRVADGSIGPLEIRIVRPGTFEEVMDLAVSRGTSIGQYKVPQCVTVPSVVEL 598
AL+AVYRQGR + +IGPLEIR+VR GTFEEVMD A+SRG SI QYK P+CV+ ++EL
Sbjct: 534 ALNAVYRQGRNGE-AIGPLEIRVVRAGTFEEVMDYAISRGASINQYKAPRCVSFGPIIEL 592
Query: 599 LDSRVVSSQFSPALPHWIP 617
L+SRV+S FSPA P + P
Sbjct: 593 LNSRVISKHFSPACPKYSP 611
>Os05g0500900 Similar to Indole-3-acetic acid-amido synthetase GH3.5 (EC 6.3.2.-)
(Auxin- responsive GH3-like protein 5) (AtGH3-5)
Length = 629
Score = 503 bits (1296), Expect = e-142, Method: Compositional matrix adjust.
Identities = 266/475 (56%), Positives = 324/475 (68%), Gaps = 20/475 (4%)
Query: 155 RRKVISNISQCIYRYVPGLEKGKGLYFMFVKSETKTRGGLTAWFALTSVYKSEQFKSMA- 213
R + S + + R VPGL+KGK +Y FVKSE +T GGL A LTS Y+S F
Sbjct: 134 RSGLYSLLMPVMSRQVPGLDKGKAMYLYFVKSEWRTPGGLPARPVLTSFYRSRYFLERPH 193
Query: 214 ---IAYTSPTAAILCEDAFQSMYAQMVCGLCQRHDVVRFGAVFAAALVRAIRFLQLNWGQ 270
YTSP A+LCEDA+QSMYAQ++CGL R DV+R GAVFA+ +RAIRFL+ +W
Sbjct: 194 DPYTVYTSPDEAVLCEDAYQSMYAQLICGLVHRADVLRVGAVFASGFLRAIRFLEKHWPS 253
Query: 271 LAADIEAGELGPHVADPSVREAVSGILR-SDAELAEFVRIECSKGDWAGIITRIWPNTKY 329
L DI AGEL V DP+VR AV +LR +D LA+ + EC++ W GII R+WP+TKY
Sbjct: 254 LCRDIRAGELDGGVTDPAVRGAVGRVLRGADPALADAIEAECARPSWQGIIRRVWPSTKY 313
Query: 330 VDAIVTGAMAQYIRTLQYYSGGLPIVSTSYASSECFFGINLRPVCDPSEVSYTIMPNTAY 389
+D IVTGAMAQYI TL++Y GGLP+ T YASSEC+FG+NL P+C PSEV+YT++P Y
Sbjct: 314 IDVIVTGAMAQYIPTLEFYGGGLPLACTMYASSECYFGLNLNPMCKPSEVAYTLIPTMCY 373
Query: 390 FEFLPVGEVV--------DATNLVDLARVEVGREYEVVITTYAGLSRYRVGDVLRVTGFH 441
FEFLPV D LVDL V++G EYE+V+TTY+GL RYRVGDVLRV GF
Sbjct: 374 FEFLPVNSGANDVAAPEPDHRGLVDLVDVKLGHEYELVVTTYSGLYRYRVGDVLRVAGFK 433
Query: 442 NAAPQFRFVRRQSVLLSVELDKTDEAELHRAVERASSALLRPRGVSVAEYTSRACT-ERI 500
NAAP F FVRR++V LS++ DKTDEAELH AV A L P G S+ EYTS A T I
Sbjct: 434 NAAPMFAFVRRKNVALSIDSDKTDEAELHAAVTEAVQHLA-PFGASLVEYTSYADTATTI 492
Query: 501 PGHYVVYWELLTESPVGAGDGDTVDGETLGRCCLEMEEALSAVYRQGRVADGSIGPLEIR 560
PGHYV++WEL SP G G V CCL +EE L++VYRQ R AD SIGPLEIR
Sbjct: 493 PGHYVLFWEL--RSPAG---GTPVPASVFEDCCLAVEEGLNSVYRQCRAADRSIGPLEIR 547
Query: 561 IVRPGTFEEVMDLAVSRGTSIGQYKVPQCVTVPSVVELLDSRVVSSQFSPALPHW 615
+V GTF+++MD A+SRG SI QYK P+CV VVELLD RV ++ FSP P W
Sbjct: 548 VVADGTFDKLMDYALSRGASINQYKAPRCVRPGPVVELLDGRVQATYFSPKCPKW 602
>Os01g0785400 GH3 auxin-responsive promoter family protein
Length = 610
Score = 500 bits (1288), Expect = e-141, Method: Compositional matrix adjust.
Identities = 260/492 (52%), Positives = 327/492 (66%), Gaps = 33/492 (6%)
Query: 150 GTSPVRRKVISNISQCIYR--------------YVPGLEKGKGLYFMFVKSETKTRGGLT 195
GTS RK++ I+ + R V GL+KGK +Y +FVK+E++T GGL
Sbjct: 111 GTSGGERKLMPTIADEMNRRSLLYSLLMPVMSQSVSGLDKGKAMYLLFVKAESRTPGGLA 170
Query: 196 AWFALTSVYKSEQF----KSMAIAYTSPTAAILCEDAFQSMYAQMVCGLCQRHDVVRFGA 251
A LTS Y+S QF + +YTSP AILC D++QSMYAQ++CGL R DV+R GA
Sbjct: 171 ARPVLTSYYRSRQFLDRPRDPYTSYTSPDEAILCVDSYQSMYAQLLCGLVHRADVLRVGA 230
Query: 252 VFAAALVRAIRFLQLNWGQLAADIEAGELGPHVADPSVREAVSGILRSDAELAEFVRIEC 311
VFA+ +RAI FL+ +W +L DI GEL P + D VR+AV +LR+D LA+ + EC
Sbjct: 231 VFASGFLRAIHFLEKHWARLCHDIRTGELDPEITDRVVRDAVGRVLRADPALADAIEDEC 290
Query: 312 SKGDWAGIITRIWPNTKYVDAIVTGAMAQYIRTLQYYSGGLPIVSTSYASSECFFGINLR 371
++ W GII R+WP TKY+D IVTG M+QYI TL++Y GGLP+ T YASSEC+FG+NL
Sbjct: 291 ARASWEGIIRRLWPRTKYIDVIVTGTMSQYIPTLEFYGGGLPLTCTMYASSECYFGLNLN 350
Query: 372 PVCDPSEVSYTIMPNTAYFEFLPVGEVVDAT------NLVDLARVEVGREYEVVITTYAG 425
P+C PS+V+YT++P Y+EFLPV +AT +LVDL V++G EYE+V+TTY+G
Sbjct: 351 PMCKPSDVAYTLIPTMCYYEFLPV-NCNNATAEASHRDLVDLVDVKLGHEYELVVTTYSG 409
Query: 426 LSRYRVGDVLRVTGFHNAAPQFRFVRRQSVLLSVELDKTDEAELHRAVERASSALLRPRG 485
L RYRVGDVLRV GF N AP F FVRRQ+V LSV+ DKTDE ELH AV A L P G
Sbjct: 410 LYRYRVGDVLRVAGFKNKAPMFSFVRRQNVALSVDSDKTDETELHAAVSGAVQHLA-PFG 468
Query: 486 VSVAEYTSRACTERIPGHYVVYWELLTESPVGAGDGDTVDGETLGRCCLEMEEALSAVYR 545
S+ EYTS A IPGHYV++WEL S V CCL +EEAL++VYR
Sbjct: 469 ASLVEYTSYADAATIPGHYVLFWELRAGS-------TAVPASVFEECCLSVEEALNSVYR 521
Query: 546 QGRVADGSIGPLEIRIVRPGTFEEVMDLAVSRGTSIGQYKVPQCVTVPSVVELLDSRVVS 605
QGR D SIGPLEIR+V GTF+++MD A+SRG SI QYK P+CV VVELLD+RV
Sbjct: 522 QGRACDRSIGPLEIRVVAEGTFDKLMDYAISRGASINQYKAPRCVRPGPVVELLDARVQG 581
Query: 606 SQFSPALPHWIP 617
FSP P W P
Sbjct: 582 KYFSPKCPKWSP 593
>Os06g0499500 Similar to Indole-3-acetic acid-amido synthetase GH3.17 (EC
6.3.2.-) (Auxin- responsive GH3-like protein 17)
(AtGH3-17)
Length = 620
Score = 344 bits (882), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 193/455 (42%), Positives = 265/455 (58%), Gaps = 23/455 (5%)
Query: 179 LYFMFVKSETKTRGGLTAWFALTSVYKSEQFKSMAIA----YTSPTAAILCEDAFQSMYA 234
+Y MF +T GL ALT+ Y S QF+ I TSP AILC QSMY
Sbjct: 159 MYLMFAFHGDRTLSGLPIQSALTTYYHSRQFQECDIGGFDKCTSPLEAILCPYGEQSMYC 218
Query: 235 QMVCGLCQRHDVVRFGAVFAAALVRAIRFLQLNWGQLAADIEAGELGPHVADPSVREAVS 294
Q++CGL R V R GA FAA LVR I+FL+ +W ++ +I +G+L + +R+AV+
Sbjct: 219 QLLCGLLHRCRVDRVGASFAAGLVRGIKFLENHWEEMCFNIRSGQLSDWITHTPLRDAVT 278
Query: 295 G--ILRSDAELAEFVRIECSKGDWAGIITRIWPNTKYVDAIVTGAMAQYIRTLQYYSGGL 352
G + S+ LA+ + EC++ W GI+ R+WP +Y+ IVTG+M+QYI L+ Y GGL
Sbjct: 279 GQYLQGSNPALADEIASECARKPWDGIVRRLWPRARYIRTIVTGSMSQYIPILEVYGGGL 338
Query: 353 PIVSTSYASSECFFGINLRPVCDPSEVSYTIMPNTAYFEFLPV----GEVVDATNLVDLA 408
P+VS YAS+EC GINLRP+ PS VSY ++PN AYFEFL V GE V T +D
Sbjct: 339 PLVSPIYASTECAAGINLRPLDPPSHVSYALLPNIAYFEFLEVMDENGEKVQGTTRLDDN 398
Query: 409 RVE----------VGREYEVVITTYAGLSRYRVGDVLRVTGFHNAAPQFRFVRRQSVLLS 458
E VGR YE+++TT+AGL RYRVGD+ V+GF+NA P F F R V+LS
Sbjct: 399 LGEVKVVDLVDVKVGRCYELIVTTFAGLYRYRVGDLFTVSGFYNATPLFHFSGRHDVILS 458
Query: 459 VELDKTDEAELHRAVERASSALLRPRGVSVAEYTSRACTERIPGHYVVYWELLTESPVGA 518
++ +K E +L A+ LRP G + T+ A +PGHY+++WEL + +
Sbjct: 459 IDYEKISEEDLLNAIAETDKFHLRPLGYMLVGSTAYADISTLPGHYILFWEL--TNTCDS 516
Query: 519 GDGDTVDGETLGRCCLEMEEALSAVYRQGRVADGSIGPLEIRIVRPGTFEEVMDLAVSRG 578
+D + +CCL +E+ +YR+ R GSI LEIRI+ G F+ +MD VSRG
Sbjct: 517 NVAIDIDQTAMEKCCLAVEDHFDEMYRKIR-HRGSISALEIRILSHGAFDALMDFFVSRG 575
Query: 579 TSIGQYKVPQCVTVPSVVELLDSRVVSSQFSPALP 613
TS QYK P + + +L+ RVV FS A P
Sbjct: 576 TSASQYKTPTAIRSKEAMMVLEERVVGRFFSQATP 610
>Os11g0186500
Length = 613
Score = 303 bits (775), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 188/479 (39%), Positives = 274/479 (57%), Gaps = 49/479 (10%)
Query: 173 LEKGKGLYFMFVKSETKTRGGLTAWFALTSVYKSEQFK-SMA------IAYTSPTAAILC 225
+E G+ L FM+ T+GGLTA +T++ +SE+F SMA + SP+ +
Sbjct: 140 VEDGRVLQFMYGSRHETTKGGLTATTVMTNLLRSEEFTASMAARSRPRLPSCSPSEVVFS 199
Query: 226 EDAFQSMYAQMVCGLCQRHDVVRFGAVFAAALVRAIRFLQLNWGQLAADIEAGELGP-HV 284
D +S+Y ++CGL +V A FA ++V A++ L+ W +L ADI G P V
Sbjct: 200 PDFDESLYCHLLCGLLLAGEVRAVSASFAHSIVVALQALERVWRELCADIRRGAASPARV 259
Query: 285 ADPSVREAVSGILRS-DAELAEFVRIECSK-GDWAGIITRIWPNTKYVDAIVTGAMAQYI 342
P+VR AV+ IL + + LA+ + C+ GDW+G+I +WPN +YV A +TG+M Y+
Sbjct: 260 TTPAVRRAVAPILAAPNPALADALERRCAALGDWSGVIPALWPNARYVQATMTGSMEHYV 319
Query: 343 RTLQYYSGGLPIVSTSYASSECFFGINLRPVCDPSEVSYTIMPNTAYFEFLPVGE----- 397
+ L++Y+GG+P+VS +YASSE GIN P V +T++P+ AYFEF+P+
Sbjct: 320 KKLRHYAGGVPLVSGNYASSEGVIGINAEQHAPPESVVFTVLPDAAYFEFIPLKPPCTDA 379
Query: 398 --------------VVDA--TNLVDLARVEVGREYEVVITTYAGLSRYRVGDVLRVTGFH 441
VDA N V L V VG YEVV+TT+ GL RYR+GDV++V GFH
Sbjct: 380 AADDDNPAAAGSSCYVDADDANPVGLTDVVVGEHYEVVMTTFTGLYRYRLGDVVKVAGFH 439
Query: 442 NAAPQFRFVRRQSVLLSVELDKTDEAELHRAVERASSALL----RPRGVSVAEYTSRACT 497
+A P+ RFV R+S++LS+ +DK E +L AV+ A+ L + + +A+YTS A T
Sbjct: 440 HATPKLRFVCRRSLILSINVDKNSEHDLQLAVDSAAKILAGDGENHKQLEIADYTSHADT 499
Query: 498 ERIPGHYVVYWELLTESPVGAGDGDTVDGETLGRCCLEMEEAL--SAVYRQGRVADGSIG 555
PGHYVV+WEL G L RCC EM+ A A Y Q R +IG
Sbjct: 500 SSDPGHYVVFWELNGGGEEDG-------GGVLQRCCDEMDRAFGADAGYAQSR-KTCAIG 551
Query: 556 PLEIRIVRPGTFEEVMDLAVSRGTSIGQYKVPQCVTVPS---VVELLDSRVVSSQFSPA 611
LE+R++R G F+EV+ V+ G+S GQ+K+P+CV PS V+ +L ++ FS A
Sbjct: 552 ALELRVLRRGAFQEVLRHYVAGGSSAGQFKMPRCVA-PSNAGVLRVLKDNTINIFFSTA 609
>Os05g0586200 GH3 auxin-responsive promoter family protein
Length = 581
Score = 303 bits (775), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 171/457 (37%), Positives = 259/457 (56%), Gaps = 32/457 (7%)
Query: 175 KGKGLYFMFVKSETKTRGGLTAWFALTSVYKSEQFK----SMAIAYTSPTAAILCEDAFQ 230
+GK L F++ + T+GG+ A A T++Y+ +++K + SP I D Q
Sbjct: 134 QGKALQFVYGSKQVITKGGILATTATTNLYRRQRYKEGMKDIQSQCCSPDEVIFGPDFHQ 193
Query: 231 SMYAQMVCGLCQRHDVVRFGAVFAAALVRAIRFLQLNWGQLAADIEAGELGPHVADPSVR 290
S+Y ++CGL +V + FA +LV A + + W L DI G L V PS+R
Sbjct: 194 SLYCHLLCGLIYSEEVHSVFSTFAHSLVHAFQTFEEVWEDLCTDIRDGVLSKKVTAPSIR 253
Query: 291 EAVSGILRSDAELAEFVRIEC-SKGDWAGIITRIWPNTKYVDAIVTGAMAQYIRTLQYYS 349
EAVS IL+ + ELA+ + +C +W G+I +WPN KYV I+TG+M Y++ L++Y+
Sbjct: 254 EAVSKILKPNPELADSIYKKCIGLSNWYGVIPALWPNAKYVYGIMTGSMEPYLKKLRHYA 313
Query: 350 GGLPIVSTSYASSECFFGINLRPVCDPSEVSYTIMPNTAYFEFL----PVGEVVD----- 400
G LP++S Y +SE + G N+ P P +V+Y ++P YFEF+ P+GE +
Sbjct: 314 GNLPLISADYGASEGWVGSNIDPTVPPEQVTYAVLPQVGYFEFIPLEKPIGEETENSASI 373
Query: 401 ---ATNLVDLARVEVGREYEVVITTYAGLSRYRVGDVLRVTGFHNAAPQFRFVRRQSVLL 457
++ V L VEVG+ YEVVIT +AGL RYR+GDV+++ FHN+ P+ +F+ R+S++L
Sbjct: 374 HYIESDPVGLTEVEVGKIYEVVITNFAGLYRYRLGDVVKIARFHNSTPELQFICRRSLVL 433
Query: 458 SVELDKTDEAELHRAVERASSALLRPRGVSVAEYTSRACTERIPGHYVVYWELLTESPVG 517
S+ +DK E +L AVE AS L + V ++TS PG YV++WEL
Sbjct: 434 SINIDKNTEKDLQLAVEEASK-FLEGEKLEVMDFTSFVERSSDPGRYVIFWEL------- 485
Query: 518 AGDGDTVDGETLGRCCLEMEEALSAVYRQGRVADGSIGPLEIRIVRPGTFEEVMDLAVSR 577
GD D E L C ++ A G +IGPLE+RI+R GTF+E++D +S
Sbjct: 486 --SGDASD-EVLSSCANALDLAFIDAGYTGSRKIKTIGPLELRILRKGTFKEILDHFLSL 542
Query: 578 GTSIGQYKVPQCVTVPS---VVELLDSRVVSSQFSPA 611
G ++ Q+K P+ V PS V+++L V S FS A
Sbjct: 543 GGAVSQFKTPRFVN-PSNSKVLQILSRNVTQSYFSTA 578
>Os11g0528700 Similar to Indole-3-acetic acid-amido synthetase GH3.17 (EC
6.3.2.-) (Auxin- responsive GH3-like protein 17)
(AtGH3-17)
Length = 469
Score = 273 bits (697), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 143/284 (50%), Positives = 190/284 (66%), Gaps = 13/284 (4%)
Query: 155 RRKVISNI-SQCIYRYVPGLEKGKGLYFMFVKSETKTRGGLTAWFALTSVYKSEQFK--- 210
R+ + N+ + +YV GL++G+G+Y +FVK E T G+ A LTS YKS F+
Sbjct: 159 RKTFLYNLLVPVMNKYVEGLDEGRGMYLLFVKPEITTASGMVARPVLTSYYKSRHFRRRP 218
Query: 211 -SMAIAYTSPTAAILCEDAFQSMYAQMVCGLCQRHDVVRFGAVFAAALVRAIRFLQLNWG 269
S YTSP AAILC D+ QSMYAQ++CGL +R +V+R GAVFA+A +RA++FL+ +W
Sbjct: 219 DSPYTRYTSPDAAILCPDSRQSMYAQLLCGLARRGEVLRVGAVFASAFLRAVKFLEGHWR 278
Query: 270 QLAADIEAGELGPHV-ADPSVREAVSGIL--RSDAELAEFVRIECSKGDWAGIITRIWPN 326
L ADI AG P V D + R AV +L R+D +LA+ + EC W GI+ R+WP
Sbjct: 279 ALCADIRAGRADPAVVTDAACRGAVDAVLAARADPDLADAIAAECGGASWRGIVRRLWPR 338
Query: 327 TKYVDAIVTGAMAQYIRTLQYYSGGLPIVSTSYASSECFFGINLRPVCDPSEVSYTIMPN 386
TKY+D IVTG+MAQYI L++Y GGLP+VST YASSE +FGINLRP+ P EV YT++PN
Sbjct: 339 TKYIDVIVTGSMAQYIPLLEFYGGGLPLVSTMYASSESYFGINLRPLDPPEEVVYTLLPN 398
Query: 387 TAYFEFLPV-----GEVVDATNLVDLARVEVGREYEVVITTYAG 425
Y+EF+ V GE V +VDL VEVG YE+V+TT+ G
Sbjct: 399 MCYYEFIKVEKDGDGEKVRDGEVVDLVGVEVGAYYELVVTTFTG 442
>Os07g0576232
Length = 158
Score = 267 bits (683), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 130/155 (83%), Positives = 142/155 (91%), Gaps = 3/155 (1%)
Query: 359 YASSECFFGINLRPVCDPSEVSYTIMPNTAYFEFLPVGEVVDATNLVDLARVEVGREYEV 418
YASSECFFG+NLRP+C PSEVSYTIMPNTAYFEFLPVGE VDA+NLV+LARVE GREYEV
Sbjct: 2 YASSECFFGLNLRPLCGPSEVSYTIMPNTAYFEFLPVGEAVDASNLVELARVEDGREYEV 61
Query: 419 VITTYAGLSRYRVGDVLRVTGFHNAAPQFRFVRRQSVLLSVELDKTDEAELHRAVERASS 478
V+TTYAGL+RYRVGDVL VTGFHNAAPQFRFVRRQSVLLS+E DKTDEAEL RAVERASS
Sbjct: 62 VVTTYAGLNRYRVGDVLCVTGFHNAAPQFRFVRRQSVLLSIEADKTDEAELQRAVERASS 121
Query: 479 ALLRPRGVSVAEYTSRACTERIPGHY---VVYWEL 510
ALLRPRG S+ EYTSRACTER+PGH+ + +W L
Sbjct: 122 ALLRPRGASIVEYTSRACTERVPGHFSPALPHWTL 156
>Os07g0576166
Length = 168
Score = 234 bits (596), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 118/159 (74%), Positives = 129/159 (81%), Gaps = 1/159 (0%)
Query: 166 IYRYVPGLEKGKGLYFMFVKSETKTRGGLTAWFALTSVYKSEQFKSMAIAYTSPTAAILC 225
+RYVPGL GKGLYF+F +SETKT GGLTA ALTSVYKSE FK A AYTSP AAILC
Sbjct: 5 FHRYVPGLHTGKGLYFLFARSETKTPGGLTAQPALTSVYKSEHFKR-AYAYTSPMAAILC 63
Query: 226 EDAFQSMYAQMVCGLCQRHDVVRFGAVFAAALVRAIRFLQLNWGQLAADIEAGELGPHVA 285
EDA QSMYAQM+CGLCQRHDV+R GAVFAAALVRAIRFLQLNW QLAADIE GEL P V
Sbjct: 64 EDASQSMYAQMLCGLCQRHDVLRVGAVFAAALVRAIRFLQLNWAQLAADIETGELNPRVT 123
Query: 286 DPSVREAVSGILRSDAELAEFVRIECSKGDWAGIITRIW 324
DPSVREAV+ ILR DAELAEF+R E + G ++R +
Sbjct: 124 DPSVREAVAVILRPDAELAEFIRTESAPGATGPALSRAF 162
>Os05g0143800 GH3 auxin-responsive promoter family protein
Length = 429
Score = 196 bits (497), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 144/401 (35%), Positives = 207/401 (51%), Gaps = 26/401 (6%)
Query: 215 AYTSPTAAILCEDAFQSMYAQMVCGLCQRHDVVRFGAVFAAALVRAIRFLQLNWGQLAAD 274
A SP IL D Q MY ++CGL + V A +AAAL RA+R LQ W QL D
Sbjct: 22 ACVSPAEVILGADHQQQMYCHLLCGLRRWDAVDCIRAPYAAALARALRLLQSKWRQLCDD 81
Query: 275 IEAGELGPHV-ADPSVREAV-SGILRSDA-ELAEFVRIECSKGDWAGIITRIWPNTKYVD 331
+E G + V D ++R AV G+L ELA VR C + DW G++ ++WP+ +Y+
Sbjct: 82 LECGTVCADVVTDAAMRGAVQDGVLAGPCPELAGRVRRICERDDWRGVLRQLWPDARYIS 141
Query: 332 AIVTGAMAQYIRTLQYYSG-GLPIVSTSYASSECFFGINLRPVCDPSEVSYTIMPNTAYF 390
+ TG M QY +++++G LP++ T Y +SEC GINL P E +Y ++P AYF
Sbjct: 142 CVTTGTMEQYFPAIKHFAGEALPVLGTDYLASECAIGINLERTSPPEETTYVLLPRAAYF 201
Query: 391 EFLPVG-----EVVDATNLVDLARVEVGREYEVVITTYAGLSRYRVGDVLRVTGFHNAAP 445
EF+P A VD+A VE G+ YE+V TT+ GL RY+VGDV+++ GFH+++P
Sbjct: 202 EFIPFDMDAAGRGAAAAEPVDIAGVEAGKTYELVATTFRGLYRYKVGDVVKIAGFHHSSP 261
Query: 446 QFRFVRRQSVLLSVELDKTDEAELHRAVERASSA--LLRPRGVSVAEYTSRACTERIPGH 503
+ +FV R + + E R V A L+ G V E+ + I G
Sbjct: 262 RLQFVTR-----APPPQEHGEVLTERDVMAAMDTFQLMLKDGGEVIEFAAFI----IDGD 312
Query: 504 YVVYWELLTESPVGAGDGDT-VDGET----LGRCCLEMEEALSAVYRQGRVADGSIGPLE 558
V +G +D E L RC +E L YR R A G + PLE
Sbjct: 313 GGQRRRRCATIAVEVSNGSKLLDHERSAAFLRRCTAPLEGCLGGAYRLSR-ATGDVAPLE 371
Query: 559 IRIVRPGTFEEVMDLAVSRGTSIGQYKVPQCVTVPSVVELL 599
+ +VRPGTF+ + + A+ G QYK P+ V +V++L
Sbjct: 372 VAVVRPGTFDRLAEAAIRGGAPANQYKPPKIVRHRHLVDVL 412
>Os11g0528600 Similar to Indole-3-acetic acid-amido synthetase GH3.17 (EC
6.3.2.-) (Auxin- responsive GH3-like protein 17)
(AtGH3-17)
Length = 238
Score = 193 bits (491), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 101/207 (48%), Positives = 129/207 (62%), Gaps = 16/207 (7%)
Query: 425 GLSRYRVGDVLRVTGFHNAAPQFRFVRRQSVLLSVELDKTDEAELHRAVERASSALLRPR 484
GL RYRVGD+L+V GFHNAAPQFRFV R++V+LSV+ DKT E +L RAV A+ LL P
Sbjct: 18 GLYRYRVGDILQVAGFHNAAPQFRFVHRRNVVLSVDTDKTSEDDLLRAVT-AAKPLLDPL 76
Query: 485 GVSVAEYTSRACTERIPGHYVVYWELLTESPVGAG--------------DGDTVDGETLG 530
+AEYT+ A T IPGHYV++WEL D D V +
Sbjct: 77 SCVLAEYTAYADTSSIPGHYVLFWELTPSPSPPPPPCHDDADDAADIGEDKDKV-AHVMA 135
Query: 531 RCCLEMEEALSAVYRQGRVADGSIGPLEIRIVRPGTFEEVMDLAVSRGTSIGQYKVPQCV 590
CC +E L +VYR+ R D SIGPLEIR+V PG F+ +MD+ VS G+S+ QYK P+C+
Sbjct: 136 ACCAAVEAGLDSVYRRCRSRDRSIGPLEIRVVAPGAFDALMDMCVSHGSSVNQYKTPRCI 195
Query: 591 TVPSVVELLDSRVVSSQFSPALPHWIP 617
P + +L+ RVV FS A+PHW P
Sbjct: 196 KHPDAIAVLEQRVVGRFFSDAVPHWEP 222
>Os01g0221100 GH3 auxin-responsive promoter family protein
Length = 462
Score = 169 bits (427), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 104/268 (38%), Positives = 157/268 (58%), Gaps = 12/268 (4%)
Query: 173 LEKGKGLYFMFVKSETKTRGGLTAWFALTSVYKSEQFKS----MAIAYTSPTAAILCEDA 228
+E GK L F++ ET+T+GGLTA A T+VY+SE+FK+ + SP I D
Sbjct: 143 VENGKALQFIYSSRETRTKGGLTATTATTNVYRSEEFKATMRDIQSQCCSPDEVIFGPDF 202
Query: 229 FQSMYAQMVCGLCQRHDVVRFGAVFAAALVRAIRFLQLNWGQLAADIEAGELGP-HVADP 287
QS+Y ++ GL DV A FA ++V A + + W L ADI GE+ P V P
Sbjct: 203 AQSLYCHLLAGLLAAGDVQIVSATFAHSVVLAFQTFERAWEDLCADIRRGEVSPSRVTSP 262
Query: 288 SVREAVSGILRS-DAELAEFVRIECSK-GDWAGIITRIWPNTKYVDAIVTGAMAQYIRTL 345
+VR A++ +L + + LA+ V +C+ +W G+I +WPN +YV I+TG+M Y++ L
Sbjct: 263 AVRRAMAALLAAPNPGLADEVARKCAALSNWYGVIPALWPNARYVYGIMTGSMEHYVKKL 322
Query: 346 QYYSGGLPIVSTSYASSECFFGINLRPVCDPSEVSYTIMPNTAYFEFLPVGEVVDATNL- 404
++Y+GGLP+V+ Y +SE + G N+ P P ++T++P+ AYFEF+P+ V
Sbjct: 323 RHYAGGLPLVAAEYGASEGWVGANVEPGTPPERATFTVLPDIAYFEFIPLKPVAGDGGYA 382
Query: 405 ----VDLARVEVGREYEVVITTYAGLSR 428
V L V G YEVV+TT+AG +R
Sbjct: 383 EAEPVGLTEVAAGELYEVVMTTFAGNTR 410
>Os07g0671500 Similar to Indole-3-acetic acid-amido synthetase GH3.17 (EC
6.3.2.-) (Auxin- responsive GH3-like protein 17)
(AtGH3-17)
Length = 242
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 56/125 (44%), Positives = 76/125 (60%), Gaps = 4/125 (3%)
Query: 155 RRKVISNISQCIYRYVPGLEKGKGLYFMFVKSETKTRGGLTAWFALTSVYKSEQF----K 210
R + S I + +Y+ GL +GK +Y +FVK+ET T G+ LTS YKS F
Sbjct: 118 RTYLYSLIMPIMNKYISGLGEGKAMYLLFVKAETLTDSGIPVRSVLTSYYKSPHFLHRKH 177
Query: 211 SMAIAYTSPTAAILCEDAFQSMYAQMVCGLCQRHDVVRFGAVFAAALVRAIRFLQLNWGQ 270
+ YTSP ILC D+ QSMY Q++CGL +R V+R GAVFA+A +R+I FL+ +W
Sbjct: 178 DLYNNYTSPDEVILCPDSQQSMYCQLLCGLVERQHVLRIGAVFASAFLRSISFLEQHWRD 237
Query: 271 LAADI 275
L DI
Sbjct: 238 LVNDI 242
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.321 0.137 0.418
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 20,028,882
Number of extensions: 804319
Number of successful extensions: 1814
Number of sequences better than 1.0e-10: 15
Number of HSP's gapped: 1766
Number of HSP's successfully gapped: 15
Length of query: 622
Length of database: 17,035,801
Length adjustment: 107
Effective length of query: 515
Effective length of database: 11,448,903
Effective search space: 5896185045
Effective search space used: 5896185045
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 159 (65.9 bits)