Os01g0764800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Nt-gh3 deduced protein.
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Os01g0764800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Nt-gh3 deduced protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 543.09 | 1.09 | 5.33 | 5.32 | 2.79 | 2.56 | 3.88 | 4.74 | 0.558 | 8.4 | 25 | 355 | -- | -- |
| 570.97 | 1.11 | 5.24 | 6.06 | 2.81 | 2.12 | 4.63 | -- | 0.704 | 8.19 | 25.01 | 388 | -- | -- |
| 585.62 | 1.13 | 5.34 | 5.25 | 2.72 | 2.67 | -- | 5.99 | 0.549 | 8.42 | 25.35 | 410 | -- | -- |
| 633.5 | 1.17 | 5.25 | 6.21 | 2.76 | 2.1 | -- | -- | 0.723 | 8.47 | 25.4 | 361 | -- | -- |
| 865.35 | 1.37 | 5.41 | 5.47 | -- | 4.13 | -- | 6.49 | 0.665 | -- | 31.74 | 562 | -- | -- |
| 636.42 | 1.18 | 5.33 | 5.53 | 3.01 | -- | 4.65 | -- | 0.282 | 8.04 | -- | -- | -- | -- |
| 700.44 | 1.24 | 5.33 | 5.66 | 2.99 | -- | -- | -- | 0.281 | 8.18 | -- | -- | -- | -- |
| 898.43 | 1.4 | 5.26 | 6.7 | -- | 4.38 | -- | -- | 0.959 | -- | 39.37 | 575 | -- | -- |
| 1532.82 | 1.82 | 5.51 | -- | 3.11 | -1.06 | -- | -- | -0.504 | 7.76 | 205.4 | 20 | -- | -- |
| 1194.48 | 1.61 | 5.41 | 5.68 | -- | -- | -- | -- | 0.316 | -- | -- | -- | -- | -- |
| 1545.06 | 1.84 | 5.47 | -- | 3.03 | -- | -- | -- | -0.349 | 8.04 | -- | -- | -- | -- |
| 1980.36 | 2.07 | 5.5 | -- | -- | 2 | -- | -- | -0.0761 | -- | 86.83 | 520 | -- | -- |
| 2046.85 | 2.11 | 5.55 | -- | -- | -- | -- | -- | -0.314 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 486.63 | wind | 3 | 14400 | < th | dose dependent | rect. | 21 | 5 |
| 4 | 490.26 | wind | 1 | 14400 | < th | dose dependent | rect. | 20 | 11 |
| 19 | 494.30 | wind | 1 | 14400 | > th | dose independent | rect. | 20 | 18 |
| 21 | 494.44 | wind | 1 | 14400 | < th | dose dependent | rect. | 20 | 16 |
| 25 | 494.65 | wind | 1 | 14400 | < th | dose dependent | sin | 11 | NA |
| 29 | 494.90 | wind | 3 | 14400 | < th | dose dependent | rect. | 1 | 1 |
| 47 | 495.62 | wind | 3 | 14400 | < th | dose dependent | rect. | 20 | 19 |
| 49 | 495.70 | wind | 1 | 14400 | > th | dose independent | rect. | 20 | 13 |
| 57 | 495.99 | wind | 1 | 14400 | < th | dose independent | rect. | 20 | 18 |
| 63 | 496.15 | wind | 1 | 14400 | > th | dose independent | rect. | 21 | 6 |
| 83 | 496.85 | wind | 1 | 14400 | > th | dose independent | rect. | 4 | 20 |
| 105 | 497.35 | wind | 1 | 14400 | < th | dose independent | rect. | 20 | 7 |
| 113 | 497.50 | wind | 1 | 14400 | < th | dose independent | rect. | 4 | 20 |
| 116 | 497.56 | wind | 1 | 14400 | < th | dose independent | rect. | 20 | 13 |
| 125 | 497.70 | wind | 1 | 14400 | > th | dose independent | rect. | 4 | 23 |
| 143 | 498.04 | wind | 3 | 14400 | < th | dose dependent | rect. | 5 | 1 |
| 189 | 499.08 | wind | 1 | 14400 | < th | dose independent | rect. | 4 | 23 |
| 224 | 499.66 | wind | 1 | 14400 | < th | dose dependent | rect. | 4 | 20 |
| 250 | 500.28 | wind | 1 | 14400 | > th | dose independent | sin | 11 | NA |
| 306 | 501.40 | wind | 1 | 14400 | < th | dose independent | sin | 11 | NA |
| 313 | 501.53 | wind | 1 | 14400 | > th | dose independent | rect. | 10 | 23 |
| 377 | 502.58 | wind | 1 | 14400 | > th | dose independent | rect. | 1 | 23 |
| 384 | 502.67 | wind | 1 | 14400 | < th | dose dependent | rect. | 10 | 21 |
| 397 | 502.95 | wind | 1 | 14400 | > th | dose independent | rect. | 8 | 23 |
| 400 | 502.98 | wind | 1 | 14400 | > th | dose independent | no | NA | NA |
| 413 | 503.18 | wind | 1 | 14400 | < th | dose independent | rect. | 10 | 23 |
| 419 | 503.26 | wind | 9 | 14400 | < th | dose dependent | rect. | 22 | 1 |
| 442 | 503.61 | wind | 3 | 14400 | < th | dose dependent | rect. | 5 | 7 |
| 465 | 503.88 | wind | 1 | 14400 | < th | dose dependent | rect. | 8 | 23 |
| 470 | 503.93 | wind | 1 | 14400 | < th | dose independent | rect. | 1 | 23 |
| 488 | 504.17 | wind | 1 | 14400 | < th | dose dependent | rect. | 1 | 23 |
| 498 | 504.33 | wind | 1 | 14400 | < th | dose dependent | no | NA | NA |
| 511 | 504.51 | wind | 1 | 14400 | < th | dose independent | no | NA | NA |
| 529 | 504.70 | wind | 1 | 14400 | < th | dose independent | rect. | 8 | 23 |
| 555 | 505.06 | wind | 3 | 14400 | < th | dose independent | rect. | 5 | 7 |
| 562 | 505.16 | wind | 3 | 14400 | < th | dose dependent | rect. | 4 | 10 |
| 568 | 505.25 | wind | 1 | 14400 | > th | dose independent | rect. | 23 | 3 |
| 588 | 505.50 | wind | 1 | 14400 | > th | dose independent | rect. | 4 | 11 |
| 609 | 505.77 | wind | 1 | 14400 | < th | dose dependent | rect. | 23 | 23 |
| 651 | 506.32 | wind | 1 | 14400 | < th | dose independent | rect. | 4 | 11 |
| 697 | 506.90 | wind | 1 | 14400 | < th | dose independent | rect. | 21 | 2 |
| 712 | 507.07 | wind | 3 | 14400 | > th | dose independent | rect. | 5 | 7 |
| 751 | 507.54 | humidity | 50 | 14400 | > th | dose dependent | rect. | 5 | 1 |
| 763 | 507.72 | wind | 1 | 14400 | < th | dose independent | rect. | 23 | 3 |
| 790 | 507.98 | wind | 3 | 14400 | > th | dose independent | rect. | 6 | 4 |
| 791 | 508.01 | wind | 1 | 14400 | > th | dose independent | rect. | 5 | 2 |
| 809 | 508.17 | wind | 1 | 14400 | > th | dose dependent | rect. | 18 | 14 |
| 824 | 508.31 | wind | 3 | 14400 | < th | dose independent | sin | 4 | NA |
| 829 | 508.38 | wind | 1 | 14400 | > th | dose dependent | rect. | 22 | 1 |
| 831 | 508.41 | wind | 3 | 14400 | < th | dose independent | rect. | 6 | 4 |
| 950 | 509.79 | wind | 1 | 43200 | > th | dose independent | rect. | 22 | 1 |