BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os07g0139400 Os07g0139400|AK065558
(421 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os07g0139400 UDP-glucose 4-epimerase family protein 878 0.0
Os08g0129700 UDP-glucose 4-epimerase family protein 669 0.0
Os04g0618200 UDP-glucose 4-epimerase family protein 649 0.0
Os08g0374800 Similar to UDP-galactose 4-epimerase-like protein 270 2e-72
Os05g0595100 Similar to UDPglucose 4-epimerase-like protein 261 6e-70
Os09g0323000 Similar to UDP-galactose 4-epimerase-like protein 256 2e-68
Os09g0526700 Similar to UDP-glucose 4-epimerase (EC 5.1.3.2... 232 3e-61
AK110765 177 1e-44
Os03g0278200 NAD-dependent epimerase/dehydratase family pro... 102 5e-22
Os03g0249500 Similar to Nucleotide sugar epimerase-like pro... 76 4e-14
Os05g0363200 UDP-glucuronic acid decarboxylase 76 4e-14
Os02g0791500 Similar to Nucleotide sugar epimerase-like pro... 72 8e-13
Os08g0526100 NAD-dependent epimerase/dehydratase family pro... 70 4e-12
>Os07g0139400 UDP-glucose 4-epimerase family protein
Length = 421
Score = 878 bits (2269), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 421/421 (100%), Positives = 421/421 (100%)
Query: 1 MLPTNRNRPQQRPARSWYFISDMDFSDPKRKPRYLSKILMVALLTAMCVVMLTQPPCHRR 60
MLPTNRNRPQQRPARSWYFISDMDFSDPKRKPRYLSKILMVALLTAMCVVMLTQPPCHRR
Sbjct: 1 MLPTNRNRPQQRPARSWYFISDMDFSDPKRKPRYLSKILMVALLTAMCVVMLTQPPCHRR 60
Query: 61 TPSVFSIHEPGVTHVLVTGGAGYIGSHAALRLLKDSFRVTIVDNLSRGNMGAIKVLQNLF 120
TPSVFSIHEPGVTHVLVTGGAGYIGSHAALRLLKDSFRVTIVDNLSRGNMGAIKVLQNLF
Sbjct: 61 TPSVFSIHEPGVTHVLVTGGAGYIGSHAALRLLKDSFRVTIVDNLSRGNMGAIKVLQNLF 120
Query: 121 SEPGRLQFIYADLGDPKAVNRIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLV 180
SEPGRLQFIYADLGDPKAVNRIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLV
Sbjct: 121 SEPGRLQFIYADLGDPKAVNRIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLV 180
Query: 181 VLEAMAAHNVRTLIYSSTCATYGEPEKMPITEGTPQFPINPYGKAKKMAEDIILDFSKSK 240
VLEAMAAHNVRTLIYSSTCATYGEPEKMPITEGTPQFPINPYGKAKKMAEDIILDFSKSK
Sbjct: 181 VLEAMAAHNVRTLIYSSTCATYGEPEKMPITEGTPQFPINPYGKAKKMAEDIILDFSKSK 240
Query: 241 KADMAVMILRYFNVIGSDPEGRLGEAPKPELREHGRISGACFDAALGIIPGLKVKGTDYE 300
KADMAVMILRYFNVIGSDPEGRLGEAPKPELREHGRISGACFDAALGIIPGLKVKGTDYE
Sbjct: 241 KADMAVMILRYFNVIGSDPEGRLGEAPKPELREHGRISGACFDAALGIIPGLKVKGTDYE 300
Query: 301 TPDGTCVRDYIDVTDLVDAHVKALNKAERGKVGIYNVGTGKGRSVKEFVEACKKATGVDI 360
TPDGTCVRDYIDVTDLVDAHVKALNKAERGKVGIYNVGTGKGRSVKEFVEACKKATGVDI
Sbjct: 301 TPDGTCVRDYIDVTDLVDAHVKALNKAERGKVGIYNVGTGKGRSVKEFVEACKKATGVDI 360
Query: 361 KVDYFPRRPGDYAEVYSDPAKINSELNWTAQHTDLLESLRVAWTWQKKHRSGYGPPQAMV 420
KVDYFPRRPGDYAEVYSDPAKINSELNWTAQHTDLLESLRVAWTWQKKHRSGYGPPQAMV
Sbjct: 361 KVDYFPRRPGDYAEVYSDPAKINSELNWTAQHTDLLESLRVAWTWQKKHRSGYGPPQAMV 420
Query: 421 L 421
L
Sbjct: 421 L 421
>Os08g0129700 UDP-glucose 4-epimerase family protein
Length = 406
Score = 669 bits (1726), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 324/414 (78%), Positives = 357/414 (86%), Gaps = 10/414 (2%)
Query: 1 MLPTNRNRPQQRPARSWYFISDMDFSDPKRKPRYLSKILMVALLTAMCVVMLTQPPCHRR 60
M+P NR Q R M++ D +RKP + K++ +LT +C+ +L Q P
Sbjct: 1 MIPLNRRASQTR--------GGMEYFDARRKPHNVGKVIAALVLTTLCIFILKQSPGFGG 52
Query: 61 TPSVFSIHEPGVTHVLVTGGAGYIGSHAALRLLKDSFRVTIVDNLSRGNMGAIKVLQNLF 120
+ SVFS HEPGVTHVLVTGGAGYIGSHA+LRLLKD++RVTIVDNLSRGNMGA+KVLQ LF
Sbjct: 53 S-SVFSRHEPGVTHVLVTGGAGYIGSHASLRLLKDNYRVTIVDNLSRGNMGAVKVLQELF 111
Query: 121 SEPGRLQFIYADLGDPKAVNRIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLV 180
+PGRLQFIYADLGD K VN+IFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTL+
Sbjct: 112 PQPGRLQFIYADLGDQKTVNKIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLL 171
Query: 181 VLEAMAAHNVRTLIYSSTCATYGEPEKMPITEGTPQFPINPYGKAKKMAEDIILDFSKSK 240
+LEAMA+H V+TLIYSSTCATYGEPEKMPI E T Q PINPYGKAKKMAEDIILDF+K +
Sbjct: 172 ILEAMASHGVKTLIYSSTCATYGEPEKMPIVETTRQLPINPYGKAKKMAEDIILDFTKGR 231
Query: 241 KADMAVMILRYFNVIGSDPEGRLGEAPKPELREHGRISGACFDAALGIIPGLKVKGTDYE 300
K DMAVMILRYFNVIGSDPEGRLGEAP+PELREHGRISGACFDAALGIIPGLKVKGTDY
Sbjct: 232 K-DMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAALGIIPGLKVKGTDYP 290
Query: 301 TPDGTCVRDYIDVTDLVDAHVKALNKAERGKVGIYNVGTGKGRSVKEFVEACKKATGVDI 360
T DGTC+RDYIDVTDLVDAHVKALNKAE KVGIYNVGTG+GRSVKEFV+ACKKATGV+I
Sbjct: 291 TTDGTCIRDYIDVTDLVDAHVKALNKAEPSKVGIYNVGTGRGRSVKEFVDACKKATGVNI 350
Query: 361 KVDYFPRRPGDYAEVYSDPAKINSELNWTAQHTDLLESLRVAWTWQKKHRSGYG 414
K++Y RRPGDYAEVYSDP KIN+ELNWTAQ+TDL ESL VAW WQK H GYG
Sbjct: 351 KIEYLSRRPGDYAEVYSDPTKINTELNWTAQYTDLKESLSVAWRWQKSHPRGYG 404
>Os04g0618200 UDP-glucose 4-epimerase family protein
Length = 428
Score = 649 bits (1673), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 313/392 (79%), Positives = 343/392 (87%), Gaps = 3/392 (0%)
Query: 23 MDFSDPKRKPRYLSKILMVALLTAMCVVMLTQPPCHRRTPSVFSIHEPGVTHVLVTGGAG 82
MDF D +RKP + K + LT MC+++L Q P T SVFS HE GVTHVLVTGGAG
Sbjct: 38 MDFGDSRRKPNVVGKFTVAVALTVMCIIVLKQSPGFTST-SVFSRHEIGVTHVLVTGGAG 96
Query: 83 YIGSHAALRLLKDSFRVTIVDNLSRGNMGAIKVLQNLFSEPGRLQFIYADLGDPKAVNRI 142
YIGSHA LRLL+D++RVTIVDNLSRGNMGA++VLQ LF EPGRLQFIYADLGD KAVN+I
Sbjct: 97 YIGSHATLRLLRDNYRVTIVDNLSRGNMGAVRVLQRLFPEPGRLQFIYADLGDAKAVNKI 156
Query: 143 FAENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLVVLEAMAAHNVRTLIYSSTCATY 202
F+ENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTL VLEAMAA+NV+TLIYSSTCATY
Sbjct: 157 FSENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLTVLEAMAAYNVKTLIYSSTCATY 216
Query: 203 GEPEKMPITEGTPQFPINPYGKAKKMAEDIILDFSKSKKADMAVMILRYFNVIGSDPEGR 262
GEP+ MPITE TPQ PINPYGKAKKMAEDIILDF SK+++MAVMILRYFNVIGSDP GR
Sbjct: 217 GEPDTMPITEATPQNPINPYGKAKKMAEDIILDF--SKRSEMAVMILRYFNVIGSDPGGR 274
Query: 263 LGEAPKPELREHGRISGACFDAALGIIPGLKVKGTDYETPDGTCVRDYIDVTDLVDAHVK 322
LGEAP+PELREHGRISGACFDAALGIIPGLKV+GTDY T DGTC+RDYIDVTDLVDAHVK
Sbjct: 275 LGEAPRPELREHGRISGACFDAALGIIPGLKVRGTDYPTADGTCIRDYIDVTDLVDAHVK 334
Query: 323 ALNKAERGKVGIYNVGTGKGRSVKEFVEACKKATGVDIKVDYFPRRPGDYAEVYSDPAKI 382
AL+KA+ GKVGIYNVGTG GRSVKEFVEACK ATG IKV + RRPGDYAEVYSDP+KI
Sbjct: 335 ALDKAQPGKVGIYNVGTGHGRSVKEFVEACKSATGASIKVSFLTRRPGDYAEVYSDPSKI 394
Query: 383 NSELNWTAQHTDLLESLRVAWTWQKKHRSGYG 414
+ ELNWTA++ DL ESL AW WQK H +GYG
Sbjct: 395 HDELNWTARYIDLRESLSTAWKWQKAHPNGYG 426
>Os08g0374800 Similar to UDP-galactose 4-epimerase-like protein
Length = 408
Score = 270 bits (689), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 158/355 (44%), Positives = 207/355 (58%), Gaps = 23/355 (6%)
Query: 71 GVTHVLVTGGAGYIGSHAALRLLKDSFRVTIVDNLSRGNMGAIKVLQNLFSEPGR-LQFI 129
GV VLVTGGAGYIGSHA L+LL FR +VDNL+ + A++ + L + R L F
Sbjct: 10 GVRTVLVTGGAGYIGSHAVLQLLLAGFRAVVVDNLNNSSELAVRRVAALAGDHSRNLAFH 69
Query: 130 YADLGDPKAVNRIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLVVLEAMAAHN 189
DL D A+ ++FA FDAV+HFA + VGES +PL YY N + T+ +LE M+AH
Sbjct: 70 KVDLRDKGALEKVFASTRFDAVVHFAGLKAVGESVQKPLLYYDNNVNGTVNLLEVMSAHG 129
Query: 190 VRTLIYSSTCATYGEPEKMPITEGTPQFPINPYGKAKKMAEDIILDFSKSKKADMAVMIL 249
+ L++SS+ A YG P+ P TE P P NPYGK K + EDI D ++ + +++L
Sbjct: 130 CKKLVFSSSAAVYGSPKNSPCTEEFPLTPNNPYGKTKLVVEDICRDIYRT-DPEWKIILL 188
Query: 250 RYFNVIGSDPEGRLGEAP-------KPELREHGRISGACFDAALGIIPGLKVKGTDYETP 302
RYFN +G+ P G LGE P P +++ A+G P L + G DY T
Sbjct: 189 RYFNPVGAHPSGYLGEDPCGIPNNLMPYVQQ----------VAVGRRPALTILGNDYATR 238
Query: 303 DGTCVRDYIDVTDLVDAHVKALNKA-ERGKVGI--YNVGTGKGRSVKEFVEACKKATGVD 359
DGT VRDYI V DL D H+ AL K E +G YN+GTGKG SV E V+A +KA+G
Sbjct: 239 DGTGVRDYIHVVDLADGHIAALQKLFESSSIGCEAYNLGTGKGTSVLEIVKAFEKASGKK 298
Query: 360 IKVDYFPRRPGDYAEVYSDPAKINSELNWTAQHTDLLESLRVAWTWQKKHRSGYG 414
I + PRRPGD ++S PAK ELNW A+ + E R W W K+ GYG
Sbjct: 299 IPLIIGPRRPGDAEILFSLPAKAEKELNWKAKF-GIDEMCRDQWNWASKNPYGYG 352
>Os05g0595100 Similar to UDPglucose 4-epimerase-like protein
Length = 354
Score = 261 bits (667), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 149/356 (41%), Positives = 206/356 (57%), Gaps = 24/356 (6%)
Query: 75 VLVTGGAGYIGSHAALRLLKDSFRVTIVDNLSRGNMGAIKVLQNLFSE-PGRLQFIYADL 133
+LVTGGAGYIGSH L+LL+ FRV ++DNL + AI ++ L L F DL
Sbjct: 9 ILVTGGAGYIGSHTVLQLLQLGFRVVVLDNLDNASELAILRVRELAGHNANNLDFRKVDL 68
Query: 134 GDPKAVNRIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLVVLEAMAAHNVRTL 193
D +A+++IF+ F+AV+HFA + VGES +PL YY N T+ +L+ MAAH L
Sbjct: 69 RDKQALDQIFSSQRFEAVIHFAGLKAVGESVQKPLLYYDNNLIGTITLLQVMAAHGCTKL 128
Query: 194 IYSSTCATYGEPEKMPITEGTPQFPINPYGKAKKMAEDIILDFSKSKKADMAVMILRYFN 253
++SS+ YG P+++P TE +P +NPYG+ K + ED+ D S + +++LRYFN
Sbjct: 129 VFSSSATVYGWPKEVPCTEESPLCAMNPYGRTKLVIEDMCRDLHAS-DPNWKIILLRYFN 187
Query: 254 VIGSDPEGRLGEAP-------KPELREHGRISGACFDAALGIIPGLKVKGTDYETPDGTC 306
+G+ P G +GE P P +++ A+G P L V GTDY T DGT
Sbjct: 188 PVGAHPSGYIGEDPCGIPNNLMPFVQQ----------VAVGRRPALTVYGTDYNTKDGTG 237
Query: 307 VRDYIDVTDLVDAHVKALNK----AERGKVGIYNVGTGKGRSVKEFVEACKKATGVDIKV 362
VRDYI V DL D H+ AL K ++R +YN+GTGKG SV E V A +KA+G I +
Sbjct: 238 VRDYIHVVDLADGHIAALRKLYEDSDRIGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPL 297
Query: 363 DYFPRRPGDYAEVYSDPAKINSELNWTAQHTDLLESLRVAWTWQKKHRSGYGPPQA 418
+ RRPGD VY+ AK EL W A++ + E R W W K+ GYG P +
Sbjct: 298 VFAGRRPGDAEIVYAQTAKAEKELKWKAKY-GVEEMCRDLWNWASKNPYGYGSPDS 352
>Os09g0323000 Similar to UDP-galactose 4-epimerase-like protein
Length = 369
Score = 256 bits (654), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 144/354 (40%), Positives = 200/354 (56%), Gaps = 22/354 (6%)
Query: 75 VLVTGGAGYIGSHAALRLLKDSFRVTIVDNLSRGNMGAIKVLQNLFSEPGR-LQFIYADL 133
VLVTGGAGYIGSH L+LL FRV + D+L + A++ + L + R L D+
Sbjct: 20 VLVTGGAGYIGSHTVLQLLAAGFRVVVADSLGNSSELAVRRVAALAGDKARNLSLHKVDI 79
Query: 134 GDPKAVNRIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLVVLEAMAAHNVRTL 193
D + ++F+ FDAV+HFA + VGES +PL YY + + T+++LE MAAH + L
Sbjct: 80 RDKGGLEKVFSSTRFDAVVHFAGLKAVGESVQKPLLYYDHNVAGTIILLEVMAAHGCKKL 139
Query: 194 IYSSTCATYGEPEKMPITEGTPQFPINPYGKAKKMAEDIILDFSKSKKADMAVMILRYFN 253
++SS+ A YG P+ P TE P P NPYG+ K +AE+I D S ++ ++++LRYFN
Sbjct: 140 VFSSSAAVYGSPKNSPCTEEFPLTPHNPYGRTKLIAEEICRDIYHS-DSEWSIILLRYFN 198
Query: 254 VIGSDPEGRLGEAP-------KPELREHGRISGACFDAALGIIPGLKVKGTDYETPDGTC 306
+G+ P G LGE P P +++ A+G P L + G DY T DGT
Sbjct: 199 PVGAHPSGYLGEDPCGIPNNLMPFVQQ----------VAVGRRPSLTIFGNDYATKDGTG 248
Query: 307 VRDYIDVTDLVDAHVKALNKAERGKVGI--YNVGTGKGRSVKEFVEACKKATGVDIKVDY 364
VRDYI V DL + H+ AL K +G YN+GTGKG SV E V A +K +G I +
Sbjct: 249 VRDYIHVVDLAEGHIAALRKLFESSIGCQAYNLGTGKGTSVLEIVNAFEKVSGKKIPLVI 308
Query: 365 FPRRPGDYAEVYSDPAKINSELNWTAQHTDLLESLRVAWTWQKKHRSGYGPPQA 418
PRRPGD ++S AK E W A++ + E R W W K+ GY P +
Sbjct: 309 GPRRPGDAEILFSSAAKAEREFKWKAKY-GIEEMCRDQWNWASKNPFGYASPDS 361
>Os09g0526700 Similar to UDP-glucose 4-epimerase (EC 5.1.3.2) (Galactowaldenase)
(UDP-galactose 4-epimerase)
Length = 373
Score = 232 bits (592), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 140/354 (39%), Positives = 194/354 (54%), Gaps = 30/354 (8%)
Query: 75 VLVTGGAGYIGSHAALRLLKDSFRVTIVDNLSRGNMGAIKVLQNLFSE--PGRLQFIYAD 132
VLVTGGAGYIG+H LRLL+ F VT+VDN A+ ++ + RL FI D
Sbjct: 28 VLVTGGAGYIGTHTVLRLLEKGFAVTVVDNFHNSVPEALDRVRLIAGAALSARLDFIAGD 87
Query: 133 LGDPKAVNRIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLVVLEAMAAHNVRT 192
L + ++FA +DAV+HFA + VGES P YY N + T+ + AM + +
Sbjct: 88 LKSKDDMEKVFAAKRYDAVIHFAGLKAVGESVAHPQMYYENNVAGTMNLYSAMTKYGCKK 147
Query: 193 LIYSSTCATYGEPEKMPITEGTPQFPINPYGKAKKMAEDIILDFSKSKKAD--MAVMILR 250
+++SS+ YG+PEK P E + +NPYG K + E+ F + + AD M V++LR
Sbjct: 148 IVFSSSATVYGQPEKTPCVEDSKLSALNPYGTTKLVLENY---FRQVQAADPEMRVILLR 204
Query: 251 YFNVIGSDPEGRLGEAPK-------PELREHGRISGACFDAALGIIPGLKVKGTDYETPD 303
YFN IG+ G +GE P+ P +++ A+G P L V G DY T D
Sbjct: 205 YFNPIGAHRSGDIGEDPRGIPNNLLPYIQQ----------VAVGRRPELNVYGVDYPTRD 254
Query: 304 GTCVRDYIDVTDLVDAHVKALNKA----ERGKVGIYNVGTGKGRSVKEFVEACKKATGVD 359
GT +RDYI V DL D H+ AL K + G V YN+GTG G +V E V+A ++A+G
Sbjct: 255 GTAIRDYIHVVDLADGHIAALEKLFATPDIGCVA-YNLGTGCGTTVLEVVKAFEEASGKK 313
Query: 360 IKVDYFPRRPGDYAEVYSDPAKINSELNWTAQHTDLLESLRVAWTWQKKHRSGY 413
I + PRRPGD EVY+ K EL W+A+ + + R W W KK+ GY
Sbjct: 314 IPIKICPRRPGDCTEVYASTDKAKKELGWSARF-GIEDMCRDQWNWAKKNPYGY 366
>AK110765
Length = 375
Score = 177 bits (450), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 126/373 (33%), Positives = 181/373 (48%), Gaps = 40/373 (10%)
Query: 75 VLVTGGAGYIGSHAAL-RLLKDSFRVTIVDNLSRGNMGAIKVLQNLF------------S 121
+L+ GGAGYIGSH AL LL +RVT++DN A K L+ +
Sbjct: 8 ILIPGGAGYIGSHVALVTLLTRKYRVTVLDNYHNAFPAACKRLEQIAIDELPAGASQQDK 67
Query: 122 EPGRLQFIYADLGDPKAVNRIF----AENAFDAVMHFAAVAYVGESTLEPLRYYHNITSN 177
+ ++ DL + ++F ++ V+ AA+ VGES+ P+ YY
Sbjct: 68 DDCKVDVFKGDLRSKDDIRKVFDAYKGDDKIWGVILCAALKAVGESSEIPIDYYDVNVGG 127
Query: 178 TLVVLEAMAAHNVRTLIYSSTCATYGEPEKMPITEGTPQFPINPYGKAKKMAEDIILDFS 237
+ +L+ M + L+YSS+ YG P K+PI E T P + YG+ K M+E II D
Sbjct: 128 LVNLLKVMHDNGCNRLVYSSSATVYGTPPKVPIPESTRLAPESVYGRTKWMSEIIIRDVC 187
Query: 238 KSKKADMAVMILRYFNVIGSDPEGRLGEAPKPELREHGRISGACFDAALGII--PGLKVK 295
+ A+ LRYFN G+ G++GE P+ + G + A+G GLKV
Sbjct: 188 DAYPEFRAIG-LRYFNPAGAHKSGKIGEDPR---GKPGNLLPLLAQMAVGKYREGGLKVF 243
Query: 296 GTDYETPDGTCVRDYIDVTDLVDAHVKALNKAER------------GKVGIYNVGTGKGR 343
G DY TPDGTCVRDYI + DL HV A+ ER GK +N+G G G
Sbjct: 244 GNDYPTPDGTCVRDYIHIEDLAGGHVNAVEALERDDIFAADKTETHGKYRAFNLGKGVGM 303
Query: 344 SVKEFVEACKKATGVDIKVDYFPRRPGDYAEVYSDPAKINSELNWTAQHT--DLLESLRV 401
SV V+A +K +G + RR GD ++ +DP+ EL + A + D+ + L
Sbjct: 304 SVLNMVDAMRKVSGYEFPHTIVDRRTGDVPDLTADPSLAEKELGFKATRSLDDMAQDL-- 361
Query: 402 AWTWQKKHRSGYG 414
W WQ + GYG
Sbjct: 362 -WRWQSNNPQGYG 373
>Os03g0278200 NAD-dependent epimerase/dehydratase family protein
Length = 675
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 100/355 (28%), Positives = 159/355 (44%), Gaps = 49/355 (13%)
Query: 74 HVLVTGGAGYIGSHAALRLLKD--SFRVTIVDNLSRGNMGAIKVLQNLFSEPGR----LQ 127
++L+TG AG+I SH A RL+++ +++ ++D L L NL P R +
Sbjct: 8 NILITGAAGFIASHVANRLVRNYPHYKIVVLDKLDY-----CSSLSNL--NPSRPSPNFK 60
Query: 128 FIYADLGDPKAVNRIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLVVLEAM-A 186
F+ D+ VN + + D +MHFAA +V S + N T V+LEA
Sbjct: 61 FVKGDIASADLVNYLLTTESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKV 120
Query: 187 AHNVRTLIYSSTCATYGEPEKMPIT---EGTPQFPINPYGKAKKMAEDIILDFSKSKKAD 243
+R I+ ST YGE ++ + E + P NPY K AE +++ + +S
Sbjct: 121 TGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRS--YG 178
Query: 244 MAVMILRYFNVIGSD--PEGRLGEAPKPELREHGRISGACFDAALGIIPGLKVKGTDYET 301
+ V+ R NV G + PE + PK L A+ +P L + G
Sbjct: 179 LPVITTRGNNVYGPNQFPEKLI---PKFIL------------LAMRGLP-LPIHG----- 217
Query: 302 PDGTCVRDYIDVTDLVDAHVKALNKAERGKVGIYNVGTGKGRSVKEFVEACKKATGVDIK 361
DG+ VR Y+ D+ +A L+K E G V YN+GT K R V + + K G+D +
Sbjct: 218 -DGSNVRSYLYCEDVAEAFEVVLHKGEVGHV--YNIGTVKERRVIDVAKDICKLFGLDTE 274
Query: 362 --VDYFPRRPGDYAEVYSDPAKINSELNWTAQHTDLLESLRVAWTWQKKHRSGYG 414
+ + RP + + D K+ +L W A+ T E L+ W + +G
Sbjct: 275 KVIRFVENRPFNDQRYFLDDQKL-KKLGW-AERTLWEEGLKKTIEWYTNNPDYWG 327
>Os03g0249500 Similar to Nucleotide sugar epimerase-like protein
(UDP-D-glucuronate 4- epimerase) (EC 5.1.3.6)
Length = 484
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 91/351 (25%), Positives = 150/351 (42%), Gaps = 42/351 (11%)
Query: 75 VLVTGGAGYIGSHAALRLLKDSFRVTIVDNLSRGNMGAIKVLQNLFSEPGRLQFIYADLG 134
VLVTG AG++G HAA L + V +DN + A+K + + + D+
Sbjct: 121 VLVTGAAGFVGCHAAAALRRRGDGVLGLDNFNDYYDPALKRGRAALLARSGVYVVDGDIA 180
Query: 135 DPKAVNRIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLVVLEAMAAHNVR-TL 193
D + + ++F F V+H AA A V + ++P+ Y + +LEA N + +
Sbjct: 181 DAELLAKLFDVVPFTHVLHLAAQAGVRHALVDPMSYVRANVGGFVALLEAARMANPQPAI 240
Query: 194 IYSSTCATYGEPEKMPITE-GTPQFPINPYGKAKKMAEDIILDFSKSKKADMAVMILRYF 252
+++S+ + YG +P +E P + Y KK E+I ++ +++ LR+F
Sbjct: 241 VWASSSSVYGLNSHVPFSEHDRTDRPASLYAATKKAGEEIAHAYNHIY--GLSLTALRFF 298
Query: 253 NVIGSDPEGRLGEAPKPELREHGRISGACFDAALGIIPGLKVKGTDYETPDG-----TCV 307
V G P GR P++ A F I+ G + T YE+ G T
Sbjct: 299 TVYG--PWGR------PDM--------AYFFFTRDILAGRPI--TVYESAGGGTHQTTIS 340
Query: 308 RDYIDVTDLVDAHVKALNKAER--GKVG---------IYNVGTGKGRSVKEFVEACKKAT 356
RD+ + D+V V AL+ A R G G YN+G V + V+ +K
Sbjct: 341 RDFTYIDDIVKGCVGALDTAGRSTGSGGKKRGPAPFRTYNLGNTSPVPVTQLVDLLEKLL 400
Query: 357 GVDI--KVDYFPRRPGDYAEVYSDPAKINSELNWTAQHTDLLESLRVAWTW 405
V K+ PR GD +++ + EL + TDL ++ W
Sbjct: 401 KVKAVRKIVKMPRN-GDVPYTHANISLAQRELGYRPS-TDLQTGVKKFVRW 449
>Os05g0363200 UDP-glucuronic acid decarboxylase
Length = 447
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 87/320 (27%), Positives = 136/320 (42%), Gaps = 42/320 (13%)
Query: 75 VLVTGGAGYIGSHAALRLLKDSFRVTIVDNLSRGNMGAIKVLQNLFSEPGRLQFIYADLG 134
VLVTGGAG++GSH RL++ V +VDNL G + + F P + I D+
Sbjct: 127 VLVTGGAGFVGSHLVDRLVERGDSVIVVDNLFTGRKENV---VHHFGNP-NFEMIRHDVV 182
Query: 135 DPKAVNRIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLVVLEAMAAHNVRTLI 194
+P I E D + H A A P++ TL +L N R L+
Sbjct: 183 EP-----ILLE--VDQIYHLACPASPVHYKYNPVKTIKTNVVGTLNMLGLAKRINARFLL 235
Query: 195 YSSTCATYGEPEKMPITEGTPQFPINP------YGKAKKMAEDIILDFSKSKKADMAVMI 248
+ST YG+P + P E T +NP Y + K+ AE + +D+ + A++ V I
Sbjct: 236 -TSTSEVYGDPLQHPQVE-TYWGNVNPIGVRSCYDEGKRTAETLTMDYHRG--ANLEVRI 291
Query: 249 LRYFNVIGSDPEGRLGEAPKPELREHGRISGACFDAALGIIPGLKVKGTDYETPDGTCVR 308
R FN G P+ + + GR+ AL P L V G DG R
Sbjct: 292 ARIFNTYG----------PRMCI-DDGRVVSNFVAQALRKEP-LTVYG------DGKQTR 333
Query: 309 DYIDVTDLVDAHVKALNKAERGKVGIYNVGTGKGRSVKEFVEACKKATGVDIKVDYFPRR 368
+ V+DLV+ ++ + E VG +N+G ++ E + + + K+++ P
Sbjct: 334 SFQYVSDLVEGLMRLM---EGEHVGPFNLGNPGEFTMLELAKVVQDTIDPNAKIEFRPNT 390
Query: 369 PGDYAEVYSDPAKINSELNW 388
D + D + L W
Sbjct: 391 QDDPHKRKPDIGRAKELLGW 410
>Os02g0791500 Similar to Nucleotide sugar epimerase-like protein
(UDP-D-glucuronate 4- epimerase) (EC 5.1.3.6)
Length = 437
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 82/303 (27%), Positives = 137/303 (45%), Gaps = 38/303 (12%)
Query: 75 VLVTGGAGYIGSHAALRLLKDSFRVTIVDNL-SRGNMGAIKVLQNLFSEPGRLQFIYADL 133
VLVTG AG++G+H +L L K V +DN S + K ++L + G + I D+
Sbjct: 99 VLVTGAAGFVGTHCSLALRKRGDGVVGIDNFNSYYDPSLKKARRSLLASHG-VFVIEGDI 157
Query: 134 GDPKAVNRIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLVVLEAMAAHNVR-T 192
D + + ++F F V+H AA A V + P Y H+ + + +LEA + +
Sbjct: 158 NDGRLLAKLFDVVPFTHVLHLAAQAGVRYAMENPASYVHSNIAGLVTLLEACKDADPQPA 217
Query: 193 LIYSSTCATYGEPEKMPITEG--TPQFPINPYGKAKKMAEDIILDFSKSKKADMAVMILR 250
++++S+ + YG +K+P TE T Q P + Y KK E+I ++ +++ LR
Sbjct: 218 IVWASSSSVYGLNDKVPFTESDRTDQ-PASLYAATKKAGEEITHTYNHIY--GLSITGLR 274
Query: 251 YFNVIGSDPEGRLGEAPKPELREHGRISGACFDAALGIIPGLKVKGTDYETPDGT-CVRD 309
+F V G P GR P++ A F I+ G + T Y + RD
Sbjct: 275 FFTVYG--PWGR------PDM--------AYFSFTRNILQGKPI--TVYRGKNRVDLARD 316
Query: 310 YIDVTDLVDAHVKALNKAER--GKVG---------IYNVGTGKGRSVKEFVEACKKATGV 358
+ + D+V + +L+ A + G G I+N+G +V V +K V
Sbjct: 317 FTYIDDIVKGCLGSLDTAGKSTGTGGKKRGPAPYRIFNLGNTSPVTVPNLVSILEKHLRV 376
Query: 359 DIK 361
K
Sbjct: 377 KAK 379
>Os08g0526100 NAD-dependent epimerase/dehydratase family protein
Length = 478
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 82/304 (26%), Positives = 130/304 (42%), Gaps = 38/304 (12%)
Query: 71 GVTHVLVTGGAGYIGSHAALRLLKDSFRVTIVDNLSRGNMGAIK-VLQNLFSEPGRLQFI 129
G VLVTG AG++G+H +L L V +DN + ++K Q L + G + +
Sbjct: 122 GGLSVLVTGAAGFVGAHCSLALRARGDGVVGLDNFNSYYDPSLKRARQRLLASRG-VAVL 180
Query: 130 YADLGDPKAVNRIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLVVLEAMAAHN 189
AD+ D + R+F F V+H AA A V + P Y + + + V E A H
Sbjct: 181 DADINDAALLERLFDAARFTHVLHLAAQAGVRYAMRAPQTYVASNVAGLVSVFEVAAKHA 240
Query: 190 --VRTLIYSSTCATYGEPEKMPIT-EGTPQFPINPYGKAKKMAEDIILDFSKSKKADMAV 246
++++S+ + YG P + E P + Y KK E I ++ +++
Sbjct: 241 DPQPAIVWASSSSVYGLNTDAPFSEEHRTDRPASLYAATKKAGEAIAHAYNHIY--GLSI 298
Query: 247 MILRYFNVIGSDPEGRLGEAPKPELREHGRISGACFDAALGIIPGLKVKGTDYETPDGT- 305
LR+F V G P GR P++ A F A I+ G + T + T DG
Sbjct: 299 TGLRFFTVYG--PWGR------PDM--------AYFSFARSIVAGEPI--TLFRTADGAD 340
Query: 306 CVRDYIDVTDLVDAHVKALNKA------ERGK------VGIYNVGTGKGRSVKEFVEACK 353
RD+ + D+V + AL+ A + GK + +YN+G V V +
Sbjct: 341 ARRDFTYIDDVVKGCLGALDTAGESTGTKSGKKRGPAPLRVYNLGNTSPVPVTRMVAILE 400
Query: 354 KATG 357
K G
Sbjct: 401 KLLG 404
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.320 0.136 0.411
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 15,471,495
Number of extensions: 659702
Number of successful extensions: 1353
Number of sequences better than 1.0e-10: 13
Number of HSP's gapped: 1324
Number of HSP's successfully gapped: 13
Length of query: 421
Length of database: 17,035,801
Length adjustment: 104
Effective length of query: 317
Effective length of database: 11,605,545
Effective search space: 3678957765
Effective search space used: 3678957765
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 157 (65.1 bits)