BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os06g0662900 Os06g0662900|Os06g0662900
(140 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os06g0662900 Pollen allergen/expansin, C-terminal domain co... 223 4e-59
AK105508 121 1e-28
Os06g0663300 Pollen allergen Lol p2 family protein 119 7e-28
Os06g0662800 Pollen allergen Lol p2 family protein 118 1e-27
Os06g0662500 Pollen allergen Lol p2 family protein 118 2e-27
Os06g0662600 Pollen allergen Lol p2 family protein 114 2e-26
Os04g0317800 Pollen allergen Lol p2 family protein 108 1e-24
Os04g0317400 Pollen allergen Lol p2 family protein 107 4e-24
Os04g0329300 Pollen allergen Lol p2 family protein 106 5e-24
Os04g0317500 Pollen allergen Lol p2 family protein 102 9e-23
Os04g0329200 Pollen allergen Lol p2 family protein 99 1e-21
Os06g0655200 Pollen allergen Lol p2 family protein 94 3e-20
Os06g0662700 Pollen allergen Lol p2 family protein 92 1e-19
Os02g0119200 Similar to Adenosine monophosphate binding pro... 90 6e-19
Os06g0662300 Pollen allergen Lol p2 family protein 87 4e-18
Os04g0328900 Pollen allergen Lol p2 family protein 79 1e-15
Os06g0662750 67 3e-12
Os01g0342900 Similar to Adenosine monophosphate binding pro... 66 6e-12
>Os06g0662900 Pollen allergen/expansin, C-terminal domain containing protein
Length = 140
Score = 223 bits (568), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 114/140 (81%), Positives = 114/140 (81%)
Query: 1 MALLSSFRXXXXXXXXXXXGSCATEVTFKVGEGSSGKSLELVTNIAISEVEIKEKGGKDW 60
MALLSSFR GSCATEVTFKVGEGSSGKSLELVTNIAISEVEIKEKGGKDW
Sbjct: 1 MALLSSFRLAVAVAALLVVGSCATEVTFKVGEGSSGKSLELVTNIAISEVEIKEKGGKDW 60
Query: 61 VALKESSTNTWSLKTCLSDFDLXXXXXXXXXXXXXXXMEGAVLCAANHAPLTPITFLDRA 120
VALKESSTNTWSLKTCLSDFDL MEGAVLCAANHAPLTPITFLDRA
Sbjct: 61 VALKESSTNTWSLKTCLSDFDLAIPSSPDTPTATTAAMEGAVLCAANHAPLTPITFLDRA 120
Query: 121 ALVYPDRPAIVASSSGLTRT 140
ALVYPDRPAIVASSSGLTRT
Sbjct: 121 ALVYPDRPAIVASSSGLTRT 140
>AK105508
Length = 145
Score = 121 bits (304), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 63/75 (84%), Positives = 64/75 (85%)
Query: 1 MALLSSFRXXXXXXXXXXXGSCATEVTFKVGEGSSGKSLELVTNIAISEVEIKEKGGKDW 60
MALLSSFR GSCATEVTFKVGEGSSGKSLELVTNIAISEVEIKEKGGKDW
Sbjct: 29 MALLSSFRLAVAVAALLVVGSCATEVTFKVGEGSSGKSLELVTNIAISEVEIKEKGGKDW 88
Query: 61 VALKESSTNTWSLKT 75
VALKESSTNTWSLK+
Sbjct: 89 VALKESSTNTWSLKS 103
>Os06g0663300 Pollen allergen Lol p2 family protein
Length = 117
Score = 119 bits (298), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 61/75 (81%), Positives = 63/75 (84%)
Query: 1 MALLSSFRXXXXXXXXXXXGSCATEVTFKVGEGSSGKSLELVTNIAISEVEIKEKGGKDW 60
MA LSSFR GSCATEVTFKVGEGSSGKSLELVTN+AISEVEIKEKGGKDW
Sbjct: 1 MASLSSFRLSVAVAALLVVGSCATEVTFKVGEGSSGKSLELVTNVAISEVEIKEKGGKDW 60
Query: 61 VALKESSTNTWSLKT 75
VALKESSTNTWSLK+
Sbjct: 61 VALKESSTNTWSLKS 75
>Os06g0662800 Pollen allergen Lol p2 family protein
Length = 228
Score = 118 bits (296), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 61/75 (81%), Positives = 63/75 (84%)
Query: 1 MALLSSFRXXXXXXXXXXXGSCATEVTFKVGEGSSGKSLELVTNIAISEVEIKEKGGKDW 60
MA LSSFR GSCATEVTFKVGEGSSGKSLELVTN+AISEVEIKEKGGKDW
Sbjct: 1 MASLSSFRLAVAVAALLVVGSCATEVTFKVGEGSSGKSLELVTNVAISEVEIKEKGGKDW 60
Query: 61 VALKESSTNTWSLKT 75
VALKESSTNTWSLK+
Sbjct: 61 VALKESSTNTWSLKS 75
Score = 89.4 bits (220), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 43/51 (84%), Positives = 48/51 (94%)
Query: 25 EVTFKVGEGSSGKSLELVTNIAISEVEIKEKGGKDWVALKESSTNTWSLKT 75
EVTFKVGE SSGKSLELVTN+AIS+VEIKEKG KDWV LKESSTNTW++K+
Sbjct: 136 EVTFKVGEASSGKSLELVTNVAISKVEIKEKGSKDWVTLKESSTNTWTIKS 186
>Os06g0662500 Pollen allergen Lol p2 family protein
Length = 117
Score = 118 bits (295), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 61/75 (81%), Positives = 63/75 (84%)
Query: 1 MALLSSFRXXXXXXXXXXXGSCATEVTFKVGEGSSGKSLELVTNIAISEVEIKEKGGKDW 60
MA LSSFR GSCATEVTFKVGEGSSGKSLELVTN+AISEVEIKEKGGKDW
Sbjct: 1 MASLSSFRLAVAVAALLVVGSCATEVTFKVGEGSSGKSLELVTNVAISEVEIKEKGGKDW 60
Query: 61 VALKESSTNTWSLKT 75
VALKESSTNTWSLK+
Sbjct: 61 VALKESSTNTWSLKS 75
>Os06g0662600 Pollen allergen Lol p2 family protein
Length = 117
Score = 114 bits (285), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 59/75 (78%), Positives = 61/75 (81%)
Query: 1 MALLSSFRXXXXXXXXXXXGSCATEVTFKVGEGSSGKSLELVTNIAISEVEIKEKGGKDW 60
MA L SFR GSCATEV FKVGEGSSGKSLELVTN+AISEVEIKEKGGKDW
Sbjct: 1 MASLYSFRLAVAVAALLVVGSCATEVAFKVGEGSSGKSLELVTNVAISEVEIKEKGGKDW 60
Query: 61 VALKESSTNTWSLKT 75
VALKESSTNTWSLK+
Sbjct: 61 VALKESSTNTWSLKS 75
>Os04g0317800 Pollen allergen Lol p2 family protein
Length = 117
Score = 108 bits (270), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 55/75 (73%), Positives = 61/75 (81%)
Query: 1 MALLSSFRXXXXXXXXXXXGSCATEVTFKVGEGSSGKSLELVTNIAISEVEIKEKGGKDW 60
MA LSSFR GSCATE+TFKV EGSS KSLELVTN+AISEVE+KEKGGKDW
Sbjct: 1 MASLSSFRLAVAVAALLVVGSCATELTFKVAEGSSAKSLELVTNVAISEVEVKEKGGKDW 60
Query: 61 VALKESSTNTWSLKT 75
VALKESS+NTW+LK+
Sbjct: 61 VALKESSSNTWTLKS 75
>Os04g0317400 Pollen allergen Lol p2 family protein
Length = 117
Score = 107 bits (266), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 55/75 (73%), Positives = 60/75 (80%)
Query: 1 MALLSSFRXXXXXXXXXXXGSCATEVTFKVGEGSSGKSLELVTNIAISEVEIKEKGGKDW 60
MA LSSFR GSCATE+TFKV EGSS SLELVTNIAISEVEIKEKGGKDW
Sbjct: 1 MASLSSFRLAVAVAALLVVGSCATELTFKVAEGSSASSLELVTNIAISEVEIKEKGGKDW 60
Query: 61 VALKESSTNTWSLKT 75
VALKESS+NTW++K+
Sbjct: 61 VALKESSSNTWTIKS 75
>Os04g0329300 Pollen allergen Lol p2 family protein
Length = 117
Score = 106 bits (264), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 54/75 (72%), Positives = 60/75 (80%)
Query: 1 MALLSSFRXXXXXXXXXXXGSCATEVTFKVGEGSSGKSLELVTNIAISEVEIKEKGGKDW 60
MA LSSFR GSCATE+TFKV EGSS SLELVTN+AISEVEIKEKGGKDW
Sbjct: 1 MASLSSFRLAVAVAALLVVGSCATELTFKVAEGSSASSLELVTNVAISEVEIKEKGGKDW 60
Query: 61 VALKESSTNTWSLKT 75
VALKESS+NTW++K+
Sbjct: 61 VALKESSSNTWTIKS 75
>Os04g0317500 Pollen allergen Lol p2 family protein
Length = 117
Score = 102 bits (254), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 51/75 (68%), Positives = 58/75 (77%)
Query: 1 MALLSSFRXXXXXXXXXXXGSCATEVTFKVGEGSSGKSLELVTNIAISEVEIKEKGGKDW 60
MA +SSFR GSCATE+TFKV EGSS SLELVTN+AISEVE+KEKGGKDW
Sbjct: 1 MASMSSFRLAVAAAALLVIGSCATELTFKVAEGSSATSLELVTNVAISEVEVKEKGGKDW 60
Query: 61 VALKESSTNTWSLKT 75
V LKES +NTW+LK+
Sbjct: 61 VGLKESGSNTWTLKS 75
>Os04g0329200 Pollen allergen Lol p2 family protein
Length = 117
Score = 98.6 bits (244), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 50/75 (66%), Positives = 57/75 (76%)
Query: 1 MALLSSFRXXXXXXXXXXXGSCATEVTFKVGEGSSGKSLELVTNIAISEVEIKEKGGKDW 60
MA +SSFR GS ATE+TFKV EGSS SLELVTN+AISEVE+KEKGGKDW
Sbjct: 1 MASMSSFRLAVAVAALLVIGSHATELTFKVAEGSSATSLELVTNVAISEVEVKEKGGKDW 60
Query: 61 VALKESSTNTWSLKT 75
V LKES +NTW+LK+
Sbjct: 61 VGLKESGSNTWTLKS 75
>Os06g0655200 Pollen allergen Lol p2 family protein
Length = 117
Score = 94.4 bits (233), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 48/75 (64%), Positives = 55/75 (73%)
Query: 1 MALLSSFRXXXXXXXXXXXGSCATEVTFKVGEGSSGKSLELVTNIAISEVEIKEKGGKDW 60
MA LSSF GS ATE+TFKV EGSS SLEL+TN+AISEVEIKEKG DW
Sbjct: 1 MASLSSFLLAAAVATLFVVGSYATELTFKVNEGSSATSLELITNVAISEVEIKEKGASDW 60
Query: 61 VALKESSTNTWSLKT 75
ALKESS+NTW++K+
Sbjct: 61 TALKESSSNTWTIKS 75
>Os06g0662700 Pollen allergen Lol p2 family protein
Length = 105
Score = 92.0 bits (227), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 45/56 (80%), Positives = 50/56 (89%)
Query: 20 GSCATEVTFKVGEGSSGKSLELVTNIAISEVEIKEKGGKDWVALKESSTNTWSLKT 75
GSCATE+ FKVGEGSS SLELVTN+ ISEVE+KEKGGK WV LKESSTNTW+LK+
Sbjct: 8 GSCATELAFKVGEGSSDTSLELVTNVTISEVEVKEKGGKYWVGLKESSTNTWTLKS 63
>Os02g0119200 Similar to Adenosine monophosphate binding protein 1 AMPBP1
Length = 571
Score = 89.7 bits (221), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 42/43 (97%), Positives = 43/43 (100%)
Query: 98 MEGAVLCAANHAPLTPITFLDRAALVYPDRPAIVASSSGLTRT 140
MEGA+LCAANHAPLTPITFLDRAALVYPDRPAIVASSSGLTRT
Sbjct: 1 MEGALLCAANHAPLTPITFLDRAALVYPDRPAIVASSSGLTRT 43
>Os06g0662300 Pollen allergen Lol p2 family protein
Length = 118
Score = 87.0 bits (214), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 44/75 (58%), Positives = 51/75 (68%)
Query: 1 MALLSSFRXXXXXXXXXXXGSCATEVTFKVGEGSSGKSLELVTNIAISEVEIKEKGGKDW 60
MA LSS GS TEVTFK+GE S+ +LEL+TN+AISEVEIKEKGG DW
Sbjct: 1 MASLSSLMLVTAVAALLVIGSSGTEVTFKIGESSTTSTLELITNVAISEVEIKEKGGSDW 60
Query: 61 VALKESSTNTWSLKT 75
LKESS NTW +K+
Sbjct: 61 RGLKESSANTWKIKS 75
>Os04g0328900 Pollen allergen Lol p2 family protein
Length = 99
Score = 79.0 bits (193), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 37/47 (78%), Positives = 45/47 (95%)
Query: 29 KVGEGSSGKSLELVTNIAISEVEIKEKGGKDWVALKESSTNTWSLKT 75
+V +GSS KSLELVTN+AIS+VE+KEKGGKDWVALKESS+NTW+LK+
Sbjct: 11 EVAKGSSAKSLELVTNVAISKVEVKEKGGKDWVALKESSSNTWTLKS 57
>Os06g0662750
Length = 84
Score = 67.4 bits (163), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 32/39 (82%), Positives = 38/39 (97%)
Query: 37 KSLELVTNIAISEVEIKEKGGKDWVALKESSTNTWSLKT 75
+SLELVTN+AISEVEI+EKGGKDWVALKESSTNT ++K+
Sbjct: 4 QSLELVTNVAISEVEIREKGGKDWVALKESSTNTCTIKS 42
>Os01g0342900 Similar to Adenosine monophosphate binding protein 1 AMPBP1
Length = 597
Score = 66.2 bits (160), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 30/36 (83%), Positives = 33/36 (91%)
Query: 98 MEGAVLCAANHAPLTPITFLDRAALVYPDRPAIVAS 133
MEG VLC+ANHAPLTPI+FL+R ALVYPDR AIVAS
Sbjct: 1 MEGTVLCSANHAPLTPISFLERTALVYPDRLAIVAS 36
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.315 0.128 0.369
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 3,575,004
Number of extensions: 99678
Number of successful extensions: 342
Number of sequences better than 1.0e-10: 18
Number of HSP's gapped: 342
Number of HSP's successfully gapped: 19
Length of query: 140
Length of database: 17,035,801
Length adjustment: 91
Effective length of query: 49
Effective length of database: 12,284,327
Effective search space: 601932023
Effective search space used: 601932023
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 150 (62.4 bits)