BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os06g0491800 Os06g0491800|AK064475
(147 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os06g0491800 Similar to Transposable element Ac 276 5e-75
Os10g0208800 110 4e-25
Os05g0590800 100 3e-22
Os05g0323500 99 1e-21
Os08g0280400 95 2e-20
Os06g0209900 Zinc finger, BED-type predicted domain contain... 94 4e-20
Os03g0250100 94 5e-20
Os10g0197200 Similar to Transposase (Fragment) 94 5e-20
Os01g0296600 92 1e-19
Os02g0457466 92 1e-19
Os12g0484800 92 1e-19
Os01g0244100 91 4e-19
Os08g0405300 91 4e-19
Os07g0526066 90 6e-19
Os04g0120400 89 1e-18
Os11g0613900 Similar to Transposase (Fragment) 75 2e-14
Os01g0170400 HAT dimerisation domain containing protein 74 3e-14
Os07g0674900 74 4e-14
Os08g0344800 71 3e-13
Os04g0542100 HAT dimerisation domain containing protein 70 5e-13
Os10g0118700 Zinc finger, BED-type predicted domain contain... 70 7e-13
Os06g0575500 70 8e-13
Os02g0521400 70 8e-13
Os10g0443500 69 1e-12
Os05g0102300 HAT dimerisation domain containing protein 69 2e-12
Os10g0170600 Zinc finger, BED-type predicted domain contain... 69 2e-12
Os10g0490200 68 2e-12
Os04g0318000 68 3e-12
Os02g0237700 Zinc finger, BED-type predicted domain contain... 67 5e-12
Os05g0219300 HAT dimerisation domain containing protein 67 6e-12
Os04g0542000 HAT dimerisation domain containing protein 66 7e-12
Os08g0446700 65 2e-11
Os04g0365600 64 5e-11
Os02g0196500 64 5e-11
Os11g0450200 63 1e-10
>Os06g0491800 Similar to Transposable element Ac
Length = 147
Score = 276 bits (705), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 136/147 (92%), Positives = 136/147 (92%)
Query: 1 VSYSQFLTRLARDVLAIQVSTIASESAFSVGGRVIDPFRSSLDPEIVQALICTKDWTAAS 60
VSYSQFLTRLARDVLAIQVSTIASESAFSVGGRVIDPFRSSLDPEIVQALICTKDWTAAS
Sbjct: 1 VSYSQFLTRLARDVLAIQVSTIASESAFSVGGRVIDPFRSSLDPEIVQALICTKDWTAAS 60
Query: 61 RKGGNVVGSILLXXXXXXXXXXXVPCCPWLMEQSKRQRQWNVLMRMALRQWMFEENVGQF 120
RKGGNVVGSILL VPCCPWLMEQSKRQRQWNVLMRMALRQWMFEENVGQF
Sbjct: 61 RKGGNVVGSILLRRTWRTWSRTSVPCCPWLMEQSKRQRQWNVLMRMALRQWMFEENVGQF 120
Query: 121 NFQVTSNFKFPFQISVLLLHKWMRYVL 147
NFQVTSNFKFPFQISVLLLHKWMRYVL
Sbjct: 121 NFQVTSNFKFPFQISVLLLHKWMRYVL 147
>Os10g0208800
Length = 603
Score = 110 bits (275), Expect = 4e-25, Method: Composition-based stats.
Identities = 53/59 (89%), Positives = 55/59 (93%)
Query: 7 LTRLARDVLAIQVSTIASESAFSVGGRVIDPFRSSLDPEIVQALICTKDWTAASRKGGN 65
L+RLARDVLAIQVST+ASESAFS GGRVIDPFRS LDPEIVQALICTKDWTAASRK N
Sbjct: 469 LSRLARDVLAIQVSTVASESAFSAGGRVIDPFRSCLDPEIVQALICTKDWTAASRKAIN 527
>Os05g0590800
Length = 770
Score = 100 bits (250), Expect = 3e-22, Method: Composition-based stats.
Identities = 48/65 (73%), Positives = 55/65 (84%)
Query: 7 LTRLARDVLAIQVSTIASESAFSVGGRVIDPFRSSLDPEIVQALICTKDWTAASRKGGNV 66
L+ LARDVLA+QVST+ASESAFS GGRVIDP+RS LDPEIV+A ICTKDW AA+RK
Sbjct: 681 LSLLARDVLAMQVSTVASESAFSAGGRVIDPYRSRLDPEIVEAFICTKDWIAAARKERKN 740
Query: 67 VGSIL 71
V SI+
Sbjct: 741 VASIV 745
>Os05g0323500
Length = 1267
Score = 99.0 bits (245), Expect = 1e-21, Method: Composition-based stats.
Identities = 48/65 (73%), Positives = 55/65 (84%)
Query: 7 LTRLARDVLAIQVSTIASESAFSVGGRVIDPFRSSLDPEIVQALICTKDWTAASRKGGNV 66
L+ LARDVLA+QV T+ASESAFS GGRVIDP+RS LD EIV+ALICTKDW AA+RK N
Sbjct: 979 LSLLARDVLAMQVLTVASESAFSAGGRVIDPYRSRLDLEIVEALICTKDWIAAARKERNN 1038
Query: 67 VGSIL 71
V SI+
Sbjct: 1039 VASIV 1043
>Os08g0280400
Length = 155
Score = 95.1 bits (235), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 45/66 (68%), Positives = 55/66 (83%), Gaps = 1/66 (1%)
Query: 7 LTRLARDVLAIQVSTIASESAFSVGGRVIDPFRSSLDPEIVQALICTKDWTAASRKGGNV 66
L+ LARDVL+IQ ST+ASESAFS GGRV+DPFR+ L+PE+V+AL+CTKDW A R+ N
Sbjct: 59 LSLLARDVLSIQASTVASESAFSAGGRVLDPFRTKLEPEMVEALVCTKDWIAGYRRDSNK 118
Query: 67 -VGSIL 71
VGSIL
Sbjct: 119 RVGSIL 124
>Os06g0209900 Zinc finger, BED-type predicted domain containing protein
Length = 883
Score = 93.6 bits (231), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 41/57 (71%), Positives = 51/57 (89%)
Query: 7 LTRLARDVLAIQVSTIASESAFSVGGRVIDPFRSSLDPEIVQALICTKDWTAASRKG 63
L+ LARDV+A+Q+ST+ASESAFS GGRV+ PFRSSL PE+++AL+CTKDW ASRKG
Sbjct: 790 LSTLARDVMAVQISTVASESAFSAGGRVVGPFRSSLHPEMIEALVCTKDWIRASRKG 846
>Os03g0250100
Length = 883
Score = 93.6 bits (231), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 41/57 (71%), Positives = 51/57 (89%)
Query: 7 LTRLARDVLAIQVSTIASESAFSVGGRVIDPFRSSLDPEIVQALICTKDWTAASRKG 63
L+ LARDV+A+Q+ST+ASESAFS GGRV+ PFRSSL PE+++AL+CTKDW ASRKG
Sbjct: 790 LSTLARDVMAVQISTVASESAFSAGGRVVGPFRSSLHPEMIEALVCTKDWIRASRKG 846
>Os10g0197200 Similar to Transposase (Fragment)
Length = 946
Score = 93.6 bits (231), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 41/57 (71%), Positives = 51/57 (89%)
Query: 7 LTRLARDVLAIQVSTIASESAFSVGGRVIDPFRSSLDPEIVQALICTKDWTAASRKG 63
L+ LARDV+A+Q+ST+ASESAFS GGRV+ PFRSSL PE+++AL+CTKDW ASRKG
Sbjct: 853 LSTLARDVMAVQISTVASESAFSAGGRVVGPFRSSLHPEMIEALVCTKDWIRASRKG 909
>Os01g0296600
Length = 737
Score = 92.4 bits (228), Expect = 1e-19, Method: Composition-based stats.
Identities = 41/57 (71%), Positives = 47/57 (82%)
Query: 7 LTRLARDVLAIQVSTIASESAFSVGGRVIDPFRSSLDPEIVQALICTKDWTAASRKG 63
L +LARD L IQVST+ASESAFS GGRV+DPFR+ LDPE VQAL+CTKDW A+ G
Sbjct: 647 LCKLARDFLCIQVSTVASESAFSAGGRVVDPFRTRLDPEAVQALVCTKDWIKAANNG 703
>Os02g0457466
Length = 525
Score = 92.0 bits (227), Expect = 1e-19, Method: Composition-based stats.
Identities = 41/57 (71%), Positives = 47/57 (82%)
Query: 7 LTRLARDVLAIQVSTIASESAFSVGGRVIDPFRSSLDPEIVQALICTKDWTAASRKG 63
L +LARD L IQVST+ASESAFS GGRV+DPFR+ LDPE VQAL+CTKDW A+ G
Sbjct: 423 LCKLARDFLCIQVSTVASESAFSAGGRVVDPFRTRLDPEAVQALVCTKDWIKAANNG 479
>Os12g0484800
Length = 337
Score = 92.0 bits (227), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 41/58 (70%), Positives = 47/58 (81%)
Query: 6 FLTRLARDVLAIQVSTIASESAFSVGGRVIDPFRSSLDPEIVQALICTKDWTAASRKG 63
L +LARD L IQVST+ASESAFS GGRV+DPFR+ LDPE VQAL+CTKDW A+ G
Sbjct: 234 ILCKLARDFLCIQVSTVASESAFSAGGRVVDPFRTRLDPEAVQALVCTKDWIKAANNG 291
>Os01g0244100
Length = 658
Score = 90.5 bits (223), Expect = 4e-19, Method: Composition-based stats.
Identities = 40/54 (74%), Positives = 46/54 (85%)
Query: 7 LTRLARDVLAIQVSTIASESAFSVGGRVIDPFRSSLDPEIVQALICTKDWTAAS 60
L +LARD L IQVST+ASESAFS GGRV+DPFR+ LDPE VQAL+CTKDW A+
Sbjct: 556 LCKLARDFLCIQVSTVASESAFSAGGRVVDPFRTRLDPEAVQALVCTKDWIKAA 609
>Os08g0405300
Length = 130
Score = 90.5 bits (223), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 49/103 (47%), Positives = 60/103 (58%), Gaps = 17/103 (16%)
Query: 17 IQVSTIASESAFSVGGRVIDPFRSSLDPEIVQALICTKDWTAASRKGGNVVGSILLXXXX 76
I VS +ASESAFS GGRVIDPF + LDPEIVQ+L+CTKDW AA RKGGNVV SI+
Sbjct: 42 IYVSPVASESAFSAGGRVIDPFHNRLDPEIVQSLVCTKDWIAALRKGGNVVCSIINE--- 98
Query: 77 XXXXXXXVPCCPWLMEQSKRQRQWNVLMRMALRQWMFEENVGQ 119
M+ +R + LM MA + ++ G
Sbjct: 99 --------------MDTENLERSFATLMTMATKPDYEQDGDGD 127
>Os07g0526066
Length = 728
Score = 89.7 bits (221), Expect = 6e-19, Method: Composition-based stats.
Identities = 41/57 (71%), Positives = 46/57 (80%)
Query: 7 LTRLARDVLAIQVSTIASESAFSVGGRVIDPFRSSLDPEIVQALICTKDWTAASRKG 63
L +LA D L IQVSTIASESAFS GGRV+DPFR+ LDPE VQAL+CTKDW A+ G
Sbjct: 626 LCKLACDFLCIQVSTIASESAFSAGGRVVDPFRTRLDPEAVQALVCTKDWIKAANNG 682
>Os04g0120400
Length = 728
Score = 89.0 bits (219), Expect = 1e-18, Method: Composition-based stats.
Identities = 39/57 (68%), Positives = 46/57 (80%)
Query: 7 LTRLARDVLAIQVSTIASESAFSVGGRVIDPFRSSLDPEIVQALICTKDWTAASRKG 63
L +LARD L IQVST+ASESAFS GG V+DPFR+ LDPE +QAL+CTKDW A+ G
Sbjct: 626 LCKLARDFLCIQVSTVASESAFSAGGHVVDPFRTRLDPEAMQALVCTKDWIKAANNG 682
>Os11g0613900 Similar to Transposase (Fragment)
Length = 709
Score = 74.7 bits (182), Expect = 2e-14, Method: Composition-based stats.
Identities = 32/51 (62%), Positives = 41/51 (80%)
Query: 6 FLTRLARDVLAIQVSTIASESAFSVGGRVIDPFRSSLDPEIVQALICTKDW 56
L+R+ARD+LAI +S++ASESAFS GGR +D FRSSL P +V+ LIC DW
Sbjct: 622 LLSRMARDLLAIPISSVASESAFSAGGRTLDDFRSSLTPTMVERLICANDW 672
>Os01g0170400 HAT dimerisation domain containing protein
Length = 664
Score = 74.3 bits (181), Expect = 3e-14, Method: Composition-based stats.
Identities = 33/61 (54%), Positives = 45/61 (73%), Gaps = 4/61 (6%)
Query: 7 LTRLARDVLAIQVSTIASESAFSVGGRVIDPFRSSLDPEIVQALICTKDWTAASRKGGNV 66
L+ LARD+LAI ++++ASESAFS GGR +D FR+SL P +V+ L+C DW +GGN
Sbjct: 504 LSHLARDLLAIPITSVASESAFSAGGRTLDDFRTSLTPRMVERLVCANDWL----RGGNY 559
Query: 67 V 67
V
Sbjct: 560 V 560
>Os07g0674900
Length = 694
Score = 73.6 bits (179), Expect = 4e-14, Method: Composition-based stats.
Identities = 33/61 (54%), Positives = 45/61 (73%), Gaps = 4/61 (6%)
Query: 7 LTRLARDVLAIQVSTIASESAFSVGGRVIDPFRSSLDPEIVQALICTKDWTAASRKGGNV 66
L+ LARD+LAI ++++ASESAFS GGR +D FR+SL P +V+ L+C DW +GGN
Sbjct: 607 LSHLARDLLAIPITSVASESAFSAGGRTLDDFRTSLTPRMVERLVCANDWL----RGGNY 662
Query: 67 V 67
V
Sbjct: 663 V 663
>Os08g0344800
Length = 509
Score = 70.9 bits (172), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 32/59 (54%), Positives = 44/59 (74%)
Query: 7 LTRLARDVLAIQVSTIASESAFSVGGRVIDPFRSSLDPEIVQALICTKDWTAASRKGGN 65
L +ARD LAI +ST+ SESAFS GGR++ RSSL PE+++AL+C KDW ++K G+
Sbjct: 451 LAIMARDFLAIPLSTVPSESAFSSGGRILGDTRSSLTPEMLEALVCAKDWLHRAKKQGD 509
>Os04g0542100 HAT dimerisation domain containing protein
Length = 349
Score = 70.5 bits (171), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 32/59 (54%), Positives = 44/59 (74%)
Query: 7 LTRLARDVLAIQVSTIASESAFSVGGRVIDPFRSSLDPEIVQALICTKDWTAASRKGGN 65
L +ARD LAI +ST+ SESAFS GGR++ RSSL PE+++AL+C KDW ++K G+
Sbjct: 291 LAIMARDFLAIPLSTVPSESAFSSGGRILGDTRSSLTPEMLEALVCAKDWLHRAKKQGD 349
>Os10g0118700 Zinc finger, BED-type predicted domain containing protein
Length = 737
Score = 69.7 bits (169), Expect = 7e-13, Method: Composition-based stats.
Identities = 32/61 (52%), Positives = 44/61 (72%), Gaps = 4/61 (6%)
Query: 7 LTRLARDVLAIQVSTIASESAFSVGGRVIDPFRSSLDPEIVQALICTKDWTAASRKGGNV 66
L+ LA D+LAI ++++ASESAFS GGR +D FR+SL P +V+ L+C DW +GGN
Sbjct: 650 LSHLACDLLAIPITSVASESAFSAGGRTLDDFRTSLTPRMVERLVCANDWL----RGGNY 705
Query: 67 V 67
V
Sbjct: 706 V 706
>Os06g0575500
Length = 1060
Score = 69.7 bits (169), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 31/50 (62%), Positives = 41/50 (82%)
Query: 7 LTRLARDVLAIQVSTIASESAFSVGGRVIDPFRSSLDPEIVQALICTKDW 56
L+ +ARD LAI +ST++SESAFS GGR++ RSSL PE+++ALIC KDW
Sbjct: 991 LSSMARDFLAIPLSTVSSESAFSCGGRILGDTRSSLTPEMLEALICAKDW 1040
>Os02g0521400
Length = 653
Score = 69.7 bits (169), Expect = 8e-13, Method: Composition-based stats.
Identities = 30/53 (56%), Positives = 42/53 (79%)
Query: 7 LTRLARDVLAIQVSTIASESAFSVGGRVIDPFRSSLDPEIVQALICTKDWTAA 59
L ++ARD+LAI ++T+ASESAFS GGRVI P R+ L P++V+AL+C + W A
Sbjct: 570 LRQIARDILAIPITTVASESAFSTGGRVITPNRNQLKPDLVEALMCVQAWGRA 622
>Os10g0443500
Length = 693
Score = 68.9 bits (167), Expect = 1e-12, Method: Composition-based stats.
Identities = 30/53 (56%), Positives = 42/53 (79%)
Query: 7 LTRLARDVLAIQVSTIASESAFSVGGRVIDPFRSSLDPEIVQALICTKDWTAA 59
L ++ARD+LAI ++T+ASESAFS GGRVI P R+ L P++V+AL+C + W A
Sbjct: 610 LRQIARDILAIPITTVASESAFSTGGRVITPNRNQLKPDLVEALMCVQAWGRA 662
>Os05g0102300 HAT dimerisation domain containing protein
Length = 542
Score = 68.6 bits (166), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 43/62 (69%)
Query: 7 LTRLARDVLAIQVSTIASESAFSVGGRVIDPFRSSLDPEIVQALICTKDWTAASRKGGNV 66
L LARD+LA+ VS + SESAFS+ GRV+ P RS L P+ ++AL+C++DW A +G
Sbjct: 464 LQMLARDILAVPVSRVVSESAFSIAGRVLSPQRSKLLPDTLEALMCSQDWLHAENRGAGS 523
Query: 67 VG 68
G
Sbjct: 524 SG 525
>Os10g0170600 Zinc finger, BED-type predicted domain containing protein
Length = 772
Score = 68.6 bits (166), Expect = 2e-12, Method: Composition-based stats.
Identities = 30/59 (50%), Positives = 42/59 (71%)
Query: 7 LTRLARDVLAIQVSTIASESAFSVGGRVIDPFRSSLDPEIVQALICTKDWTAASRKGGN 65
L ++ARD+ AI VST+ASESAFS GRV+ RS L PE+++AL+C++DW + N
Sbjct: 691 LRKVARDIFAIPVSTVASESAFSTSGRVLSEHRSRLTPELLEALMCSQDWLRNKYRADN 749
>Os10g0490200
Length = 803
Score = 68.2 bits (165), Expect = 2e-12, Method: Composition-based stats.
Identities = 30/59 (50%), Positives = 42/59 (71%)
Query: 7 LTRLARDVLAIQVSTIASESAFSVGGRVIDPFRSSLDPEIVQALICTKDWTAASRKGGN 65
L ++ARD+ AI VST+ASESAFS GRV+ RS L PE+++AL+C++DW + N
Sbjct: 722 LRKVARDIFAIPVSTVASESAFSTSGRVLSEHRSRLTPELLEALMCSQDWLRNKYRADN 780
>Os04g0318000
Length = 472
Score = 67.8 bits (164), Expect = 3e-12, Method: Composition-based stats.
Identities = 28/50 (56%), Positives = 39/50 (78%)
Query: 7 LTRLARDVLAIQVSTIASESAFSVGGRVIDPFRSSLDPEIVQALICTKDW 56
+ +LA+D+L I +++++SESAFS GGRVI +RSSL P VQAL+CT W
Sbjct: 388 VAKLAKDILTIPITSVSSESAFSTGGRVISDYRSSLLPSTVQALVCTSSW 437
>Os02g0237700 Zinc finger, BED-type predicted domain containing protein
Length = 653
Score = 67.0 bits (162), Expect = 5e-12, Method: Composition-based stats.
Identities = 29/53 (54%), Positives = 41/53 (77%)
Query: 7 LTRLARDVLAIQVSTIASESAFSVGGRVIDPFRSSLDPEIVQALICTKDWTAA 59
L ++ARD+LAI ++T+A ESAFS GGRVI P R+ L P++V+AL+C + W A
Sbjct: 570 LRQIARDILAIPITTVAFESAFSTGGRVITPNRNQLKPDLVEALMCVQAWGRA 622
>Os05g0219300 HAT dimerisation domain containing protein
Length = 772
Score = 66.6 bits (161), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 40/50 (80%)
Query: 7 LTRLARDVLAIQVSTIASESAFSVGGRVIDPFRSSLDPEIVQALICTKDW 56
L+ +ARD LAI +ST++SE AFS GGR++ RSSL PE+++ALIC KDW
Sbjct: 655 LSSMARDFLAIPLSTVSSELAFSCGGRILGDTRSSLTPEMLEALICAKDW 704
>Os04g0542000 HAT dimerisation domain containing protein
Length = 108
Score = 66.2 bits (160), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 42/61 (68%)
Query: 7 LTRLARDVLAIQVSTIASESAFSVGGRVIDPFRSSLDPEIVQALICTKDWTAASRKGGNV 66
L ++ARD+ AI VST+ASE AFS GRV+ RS L PE+++AL+C++DW +G
Sbjct: 42 LRKVARDIFAIPVSTVASEYAFSTSGRVLSEHRSRLTPELLEALMCSQDWLRNKYRGTYA 101
Query: 67 V 67
V
Sbjct: 102 V 102
>Os08g0446700
Length = 564
Score = 65.1 bits (157), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/54 (59%), Positives = 38/54 (70%)
Query: 6 FLTRLARDVLAIQVSTIASESAFSVGGRVIDPFRSSLDPEIVQALICTKDWTAA 59
L ++A D+LAI ST+ SESAFS GGRVI +RSSL E VQALIC + W A
Sbjct: 494 ILAQMACDILAIPASTVPSESAFSTGGRVISDYRSSLSSETVQALICLQSWIRA 547
>Os04g0365600
Length = 676
Score = 63.5 bits (153), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 39/50 (78%)
Query: 7 LTRLARDVLAIQVSTIASESAFSVGGRVIDPFRSSLDPEIVQALICTKDW 56
L+ +A+D LAI +ST++SESAFS GR++ RSSL PE++ ALIC KDW
Sbjct: 559 LSAMAKDFLAIPLSTVSSESAFSCRGRILGDTRSSLTPEMLDALICAKDW 608
>Os02g0196500
Length = 440
Score = 63.5 bits (153), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 39/50 (78%)
Query: 7 LTRLARDVLAIQVSTIASESAFSVGGRVIDPFRSSLDPEIVQALICTKDW 56
L R+ARD+ AI VST+ASESAFS GRV+ RS L ++++ALIC++DW
Sbjct: 358 LRRIARDIYAIPVSTVASESAFSTSGRVLSEHRSRLTSKLLEALICSQDW 407
>Os11g0450200
Length = 281
Score = 62.8 bits (151), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 29/54 (53%), Positives = 40/54 (74%)
Query: 7 LTRLARDVLAIQVSTIASESAFSVGGRVIDPFRSSLDPEIVQALICTKDWTAAS 60
L ++ARD+LAI ++T+ASESAFS G RVI P R+ L P +V+AL+C + W A
Sbjct: 198 LRQIARDILAIPITTVASESAFSTGWRVITPNRNQLKPNLVEALMCVQAWGRAD 251
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.327 0.136 0.428
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 4,157,448
Number of extensions: 126610
Number of successful extensions: 460
Number of sequences better than 1.0e-10: 38
Number of HSP's gapped: 466
Number of HSP's successfully gapped: 38
Length of query: 147
Length of database: 17,035,801
Length adjustment: 91
Effective length of query: 56
Effective length of database: 12,284,327
Effective search space: 687922312
Effective search space used: 687922312
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 151 (62.8 bits)