Os05g0219300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : HAT dimerisation domain containing protein.
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Os05g0219300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : HAT dimerisation domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 241.56 | 0.73 | 3.02 | -0.0999 | 0.877 | 1.37 | -5.38 | -7.45 | 0.154 | 17.2 | 3.379 | 703 | -- | -- |
| 252.84 | 0.741 | 3.05 | -0.306 | 0.468 | 0.871 | 0.534 | -- | 0.0706 | 18 | 2.42 | 742 | -- | -- |
| 249.87 | 0.736 | 3.01 | -0.0677 | 0.194 | 0.417 | -- | -2.14 | 0.174 | 4.21 | 70.36 | 1254 | -- | -- |
| 249.77 | 0.736 | 3.08 | -0.25 | 1.3 | 2.07 | -- | -- | 0.0691 | 18.3 | 2.339 | 806 | -- | -- |
| 251.08 | 0.738 | 3.01 | -0.125 | -- | 0.362 | -- | -1.96 | 0.149 | -- | 75.25 | 1243 | -- | -- |
| 257.6 | 0.752 | 3.05 | -0.383 | 0.2 | -- | -0.426 | -- | 0.0019 | 7.45 | -- | -- | -- | -- |
| 258.04 | 0.752 | 3.05 | -0.394 | 0.205 | -- | -- | -- | 0.00192 | 6.86 | -- | -- | -- | -- |
| 256.18 | 0.745 | 3.05 | -0.373 | -- | 0.334 | -- | -- | 0.0377 | -- | 113.6 | 700 | -- | -- |
| 250.13 | 0.737 | 3.08 | -- | 1.43 | 2.31 | -- | -- | 0.0942 | 18.6 | 1.151 | 846 | -- | -- |
| 260.23 | 0.754 | 3.05 | -0.389 | -- | -- | -- | -- | 0.00583 | -- | -- | -- | -- | -- |
| 262.12 | 0.757 | 3.04 | -- | 0.2 | -- | -- | -- | 0.0458 | 6.98 | -- | -- | -- | -- |
| 259.85 | 0.751 | 3.04 | -- | -- | 0.348 | -- | -- | 0.0801 | -- | 129.9 | 700 | -- | -- |
| 264.23 | 0.759 | 3.05 | -- | -- | -- | -- | -- | 0.049 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 231.34 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 4 | 12 |
| 4 | 232.80 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 4 | 7 |
| 7 | 232.83 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 4 | 7 |
| 10 | 233.77 | wind | 3.0 | 30 | > th | dose independent | rect. | 5 | 1 |
| 14 | 234.33 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 4 | 12 |
| 18 | 234.98 | wind | 3.0 | 10 | > th | dose dependent | rect. | 6 | 1 |
| 28 | 236.36 | humidity | 80.0 | 720 | > th | dose dependent | rect. | 8 | 7 |
| 29 | 236.41 | humidity | 80.0 | 720 | > th | dose dependent | rect. | 9 | 5 |
| 30 | 236.48 | humidity | 80.0 | 720 | > th | dose independent | rect. | 23 | 15 |
| 35 | 237.00 | humidity | 80.0 | 720 | > th | dose independent | rect. | 1 | 14 |
| 36 | 237.03 | humidity | 80.0 | 720 | > th | dose independent | rect. | 9 | 5 |
| 42 | 237.26 | humidity | 90.0 | 720 | > th | dose independent | rect. | 11 | 2 |
| 48 | 237.57 | radiation | 1.0 | 720 | < th | dose independent | rect. | 8 | 6 |
| 49 | 237.57 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 8 | 6 |
| 51 | 237.63 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 11 | 2 |
| 53 | 237.79 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 1 | 15 |
| 65 | 237.96 | humidity | 80.0 | 720 | < th | dose independent | rect. | 22 | 17 |
| 66 | 237.99 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 9 | 3 |
| 68 | 237.99 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 23 | 14 |
| 71 | 238.09 | humidity | 70.0 | 720 | > th | dose dependent | rect. | 2 | 13 |
| 73 | 238.17 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 10 | 2 |
| 75 | 238.17 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 10 | 2 |
| 83 | 238.24 | precipitation | 0.1 | 90 | > th | dose independent | sin | 3 | NA |
| 108 | 238.56 | precipitation | 0.1 | 90 | < th | dose independent | sin | 3 | NA |
| 109 | 238.56 | precipitation | 0.1 | 90 | < th | dose dependent | sin | 3 | NA |
| 115 | 238.63 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 1 | 15 |
| 117 | 238.65 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 10 | 2 |
| 126 | 238.73 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 1 | 10 |
| 137 | 238.78 | wind | 9.0 | 270 | > th | dose dependent | rect. | 11 | 1 |
| 138 | 238.78 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 1 | 10 |
| 155 | 238.87 | wind | 7.0 | 270 | > th | dose dependent | rect. | 2 | 6 |
| 161 | 238.94 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 4 | 3 |
| 162 | 238.95 | wind | 9.0 | 270 | > th | dose independent | rect. | 11 | 1 |
| 168 | 238.96 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 4 | 3 |
| 268 | 239.05 | wind | 9.0 | 90 | > th | dose independent | rect. | 11 | 4 |
| 288 | 239.11 | humidity | 80.0 | 720 | > th | dose independent | sin | 4 | NA |
| 290 | 239.13 | wind | 9.0 | 90 | > th | dose dependent | rect. | 11 | 4 |
| 306 | 239.26 | wind | 7.0 | 270 | > th | dose independent | rect. | 2 | 6 |
| 307 | 239.27 | wind | 9.0 | 1440 | < th | dose independent | rect. | 7 | 4 |
| 318 | 239.32 | wind | 9.0 | 270 | > th | dose independent | rect. | 1 | 12 |
| 336 | 239.39 | wind | 9.0 | 270 | > th | dose dependent | rect. | 1 | 12 |
| 339 | 239.40 | humidity | 90.0 | 90 | > th | dose dependent | rect. | 10 | 13 |
| 356 | 239.51 | wind | 9.0 | 1440 | < th | dose independent | rect. | 23 | 12 |
| 421 | 239.72 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 24 | 11 |
| 430 | 239.72 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 24 | 11 |
| 442 | 239.77 | precipitation | 0.1 | 270 | > th | dose dependent | sin | 4 | NA |
| 443 | 239.78 | radiation | 1.0 | 720 | > th | dose independent | rect. | 4 | 11 |
| 462 | 239.80 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 7 | 7 |
| 467 | 239.80 | wind | 9.0 | 1440 | > th | dose dependent | rect. | 1 | 11 |
| 477 | 239.82 | wind | 9.0 | 1440 | > th | dose dependent | rect. | 9 | 3 |
| 499 | 239.87 | wind | 9.0 | 1440 | > th | dose independent | rect. | 9 | 2 |
| 520 | 239.92 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 1 | 10 |
| 533 | 239.94 | wind | 7.0 | 1440 | > th | dose dependent | rect. | 10 | 1 |
| 535 | 239.95 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 1 | 10 |
| 549 | 239.99 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 2 | 9 |
| 553 | 239.99 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 2 | 9 |
| 598 | 240.06 | radiation | 1.0 | 720 | < th | dose independent | rect. | 18 | 22 |
| 599 | 240.08 | wind | 9.0 | 1440 | < th | dose independent | rect. | 4 | 7 |
| 612 | 240.10 | wind | 9.0 | 1440 | < th | dose independent | rect. | 2 | 9 |
| 613 | 240.10 | radiation | 1.0 | 720 | < th | dose independent | rect. | 23 | 16 |
| 681 | 240.22 | wind | 9.0 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 685 | 240.24 | humidity | 70.0 | 720 | > th | dose dependent | sin | 2 | NA |
| 693 | 240.26 | wind | 9.0 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 710 | 240.31 | radiation | 1.0 | 720 | < th | dose independent | rect. | 2 | 14 |
| 717 | 240.33 | humidity | 80.0 | 720 | < th | dose independent | sin | 4 | NA |
| 752 | 240.39 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 1 | 6 |
| 754 | 240.39 | radiation | 1.0 | 720 | < th | dose independent | rect. | 21 | 18 |
| 790 | 240.44 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 1 | 6 |
| 791 | 240.45 | wind | 9.0 | 270 | > th | dose independent | sin | 7 | NA |
| 832 | 240.51 | wind | 9.0 | 270 | > th | dose dependent | sin | 7 | NA |
| 855 | 240.56 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 24 | 6 |
| 858 | 240.56 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 24 | 6 |
| 886 | 240.67 | radiation | 1.0 | 720 | > th | dose independent | sin | 3 | NA |
| 909 | 240.69 | wind | 9.0 | 270 | < th | dose independent | sin | 7 | NA |
| 945 | 240.77 | humidity | 70.0 | 30 | > th | dose dependent | rect. | 8 | 22 |
| 956 | 240.79 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 1 | 3 |
| 993 | 240.83 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 1 | 3 |