Os10g0490200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description :
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Os10g0490200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description :
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 170 | 0.613 | 8.51 | -2.05 | 3.79 | 0.616 | 2.85 | 5.07 | -0.455 | 5.12 | 63 | 4598 | -- | -- |
| 200.79 | 0.66 | 8.45 | -2.45 | 3.81 | 0.993 | 2.96 | -- | -0.228 | 5.05 | 71.93 | 8232 | -- | -- |
| 188.61 | 0.64 | 8.5 | -2.07 | 3.81 | 0.544 | -- | 5.29 | -0.442 | 5.13 | 64 | 4769 | -- | -- |
| 224.43 | 0.702 | 8.51 | -2.22 | 3.65 | 0.644 | -- | -- | -0.512 | 5.38 | 64 | 4769 | -- | -- |
| 389.47 | 0.919 | 8.66 | -1.97 | -- | 3.09 | -- | 1.99 | -0.471 | -- | 73 | 404 | -- | -- |
| 217.97 | 0.692 | 8.49 | -2.22 | 3.79 | -- | 3.03 | -- | -0.423 | 5.15 | -- | -- | -- | -- |
| 241.03 | 0.727 | 8.5 | -2.22 | 3.81 | -- | -- | -- | -0.437 | 5.18 | -- | -- | -- | -- |
| 400.58 | 0.932 | 8.51 | -1.88 | -- | 3.33 | -- | -- | -0.194 | -- | 73.09 | 413 | -- | -- |
| 310.11 | 0.82 | 8.38 | -- | 3.65 | 1.41 | -- | -- | -0.295 | 4.93 | 51 | 3209 | -- | -- |
| 999.08 | 1.48 | 8.54 | -2.09 | -- | -- | -- | -- | -0.341 | -- | -- | -- | -- | -- |
| 370.97 | 0.901 | 8.44 | -- | 3.77 | -- | -- | -- | -0.19 | 5.2 | -- | -- | -- | -- |
| 490.84 | 1.03 | 8.46 | -- | -- | 3.48 | -- | -- | 0.00931 | -- | 72.14 | 408 | -- | -- |
| 1113.92 | 1.56 | 8.49 | -- | -- | -- | -- | -- | -0.109 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 154.53 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 21 | 1 |
| 3 | 155.18 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 20 | 1 |
| 47 | 161.69 | wind | 5.0 | 14400 | < th | dose independent | rect. | 4 | 6 |
| 51 | 161.78 | wind | 5.0 | 14400 | < th | dose independent | rect. | 5 | 4 |
| 53 | 162.02 | wind | 5.0 | 14400 | > th | dose independent | rect. | 5 | 4 |
| 55 | 162.25 | wind | 5.0 | 14400 | > th | dose independent | rect. | 4 | 6 |
| 60 | 162.78 | wind | 5.0 | 14400 | < th | dose independent | rect. | 6 | 2 |
| 68 | 163.23 | wind | 5.0 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 76 | 163.70 | wind | 9.0 | 14400 | < th | dose independent | rect. | 19 | 16 |
| 81 | 163.84 | wind | 9.0 | 14400 | > th | dose independent | rect. | 19 | 16 |
| 104 | 165.50 | wind | 3.0 | 14400 | > th | dose dependent | rect. | 3 | 7 |
| 110 | 165.82 | wind | 5.0 | 14400 | > th | dose dependent | rect. | 7 | 1 |
| 111 | 165.91 | temperature | 25.0 | 14400 | < th | dose dependent | rect. | 16 | 2 |
| 112 | 166.00 | temperature | 20.0 | 14400 | < th | dose dependent | rect. | 21 | 1 |
| 114 | 166.05 | wind | 3.0 | 14400 | > th | dose dependent | rect. | 20 | 14 |
| 117 | 166.16 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 17 | 2 |
| 119 | 166.16 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 17 | 2 |
| 131 | 166.53 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 2 |
| 143 | 166.98 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 18 | 18 |
| 145 | 167.01 | temperature | 25.0 | 14400 | < th | dose dependent | rect. | 10 | 8 |
| 153 | 167.18 | wind | 5.0 | 14400 | > th | dose dependent | rect. | 5 | 4 |
| 178 | 167.66 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 21 | 1 |
| 186 | 167.73 | temperature | 25.0 | 14400 | < th | dose dependent | rect. | 10 | 1 |
| 199 | 167.99 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 4 | 14 |
| 201 | 168.06 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 6 | 12 |
| 202 | 168.06 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 6 | 12 |
| 204 | 168.13 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 16 | 3 |
| 210 | 168.20 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 6 | 12 |
| 223 | 168.34 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 14 | 5 |
| 248 | 168.66 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 8 | 11 |
| 249 | 168.68 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 254 | 168.77 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 8 | 10 |
| 255 | 168.77 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 8 | 10 |
| 261 | 168.80 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 10 | 9 |
| 269 | 168.90 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 8 | 10 |
| 274 | 169.00 | wind | 3.0 | 14400 | > th | dose dependent | sin | 9 | NA |
| 282 | 169.08 | temperature | 20.0 | 14400 | > th | dose independent | sin | 19 | NA |
| 300 | 169.32 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 9 | 2 |
| 320 | 169.53 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 21 | 1 |
| 324 | 169.58 | wind | 5.0 | 14400 | < th | dose independent | rect. | 20 | 14 |
| 330 | 169.70 | wind | 5.0 | 14400 | < th | dose independent | rect. | 19 | 16 |
| 333 | 169.72 | humidity | 90.0 | 4320 | < th | dose dependent | rect. | 16 | 2 |
| 351 | 169.83 | humidity | 60.0 | 4320 | > th | dose independent | rect. | 12 | 3 |
| 376 | 170.05 | wind | 9.0 | 14400 | < th | dose independent | sin | 9 | NA |
| 377 | 170.05 | humidity | 60.0 | 4320 | > th | dose independent | rect. | 12 | 1 |
| 378 | 170.05 | wind | 9.0 | 14400 | > th | dose dependent | sin | 9 | NA |
| 386 | 170.11 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 16 | 10 |
| 387 | 170.12 | wind | 5.0 | 14400 | > th | dose independent | rect. | 19 | 15 |
| 393 | 170.17 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 9 | 2 |
| 401 | 170.24 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 415 | 170.34 | humidity | 60.0 | 4320 | < th | dose independent | rect. | 12 | 3 |
| 437 | 170.48 | humidity | 50.0 | 4320 | > th | dose dependent | rect. | 16 | 2 |
| 483 | 170.86 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 4 | 18 |
| 490 | 170.90 | wind | 1.0 | 14400 | < th | dose independent | rect. | 5 | 1 |
| 521 | 171.13 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 10 | 12 |
| 522 | 171.13 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 17 | 13 |
| 534 | 171.22 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 8 | 14 |
| 544 | 171.29 | precipitation | 0.1 | 14400 | > th | dose dependent | sin | 20 | NA |
| 551 | 171.31 | wind | 9.0 | 14400 | > th | dose independent | sin | 9 | NA |
| 563 | 171.37 | temperature | 20.0 | 14400 | < th | dose independent | sin | 19 | NA |
| 567 | 171.39 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 9 | 13 |
| 584 | 171.47 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 10 | 1 |
| 590 | 171.50 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 4 | 22 |
| 592 | 171.51 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 3 | 2 |
| 612 | 171.60 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 10 | 16 |
| 618 | 171.64 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 24 | 18 |
| 633 | 171.70 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 20 | 23 |
| 638 | 171.72 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 8 | 18 |
| 643 | 171.76 | humidity | 60.0 | 4320 | > th | dose independent | rect. | 12 | 11 |
| 645 | 171.77 | humidity | 60.0 | 4320 | > th | dose independent | rect. | 12 | 18 |
| 648 | 171.77 | wind | 9.0 | 14400 | < th | dose dependent | rect. | 3 | 2 |
| 661 | 171.79 | humidity | 60.0 | 4320 | > th | dose independent | rect. | 12 | 9 |
| 692 | 171.91 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 9 | 5 |
| 747 | 172.15 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 17 | 5 |
| 757 | 172.18 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 10 | 12 |
| 789 | 172.33 | wind | 5.0 | 14400 | < th | dose independent | sin | 8 | NA |
| 790 | 172.33 | humidity | 60.0 | 4320 | < th | dose independent | rect. | 12 | 8 |
| 894 | 172.67 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 9 | 13 |
| 907 | 172.76 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 12 | 2 |
| 923 | 172.85 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 12 | 1 |
| 941 | 172.89 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 21 | 1 |
| 987 | 173.07 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 5 | 17 |
| 988 | 173.07 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 5 | 17 |
| 990 | 173.07 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 5 | 17 |