BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os10g0490200 Os10g0490200|Os10g0490200
         (803 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G42170.1  | chr3:14321838-14323928 FORWARD LENGTH=697          278   9e-75
AT1G18560.1  | chr1:6385614-6388005 FORWARD LENGTH=691            117   3e-26

>AT3G42170.1 | chr3:14321838-14323928 FORWARD LENGTH=697
          Length = 696

 Score =  278 bits (711), Expect = 9e-75,   Method: Compositional matrix adjust.
 Identities = 189/666 (28%), Positives = 309/666 (46%), Gaps = 40/666 (6%)

Query: 125 QLLQPARIAVTSTQAESVNDSEPIQVEDDEPEDDSENFGTKRKLTSVVWKDFKKVKVCGD 184
           ++  P    +  T  E  ND+E +  E    +        +RK  S+VW+ F    V  +
Sbjct: 31  EIRSPETQPIEETALEVYNDTEMVSPETQPIK--------RRKKKSMVWEHFTIEAVEPN 82

Query: 185 VK-AECLHCHKRLGGKSSN---GTSHLHDHLKICT--------------LRKIKMGPKTL 226
            + A C  C++     + N   GTSHL  H+   T              L      PKT 
Sbjct: 83  CRRAFCKGCNQSFAYSNGNKVAGTSHLKRHIFKGTCPALIHTHDNDNNPLMSTPYTPKT- 141

Query: 227 AQSSLRFNSVEGGKVSVDTYTFDPAVARRELAAMIILHEYPLSIVDHIGFRRFVSALQPL 286
                R+ S       V    F+    R+E+A MII+H+YPL +V H GF  FV ++QP 
Sbjct: 142 DTPRRRYRSQNNASPYV---AFNQDKCRQEIAKMIIMHDYPLHMVQHPGFVSFVQSIQPH 198

Query: 287 FKMVTRNTIRKDIMDTYEEEKKRALAYMAGAKSRVGITTDLWTSDNQKRGYMAITAHFID 346
           F  V+ N ++ D + TY  EK+  +  + G   R  +T D WTS     GY+ ITAH+ID
Sbjct: 199 FDAVSFNNVQGDCVATYLAEKQNVMKSLEGIPGRFCLTLDFWTS-KLTLGYVFITAHYID 257

Query: 347 DSWTLRSIIMRFIYVPAPHTAEVICEHLYEALVEWNLDEKISTLTLDNCTTNDKVISELI 406
             W ++  ++  +    P   E +   +   + EW L+ K+  +T ++  +N  V +   
Sbjct: 258 SDWKIQKKLLNVLMESYPEADEALSLAVANCVSEWGLEGKLFNVTFNHPASNSAVENIRP 317

Query: 407 KKIGKRKLMLEGKLLHMRCAAHILNLIVRDGLDVIKDSIAKVRESVAFWTATPKRVEKFE 466
           +   K   +L+G+L+   C A     + +D L+  KD I  +R+SV     +    E+F 
Sbjct: 318 QLCIKNPGILDGQLVIGNCVARTFGSLAKDVLEKGKDVIKNIRDSVKHVKTSESHEERFT 377

Query: 467 EIAKHVKVKMENKLGLDCKTRWNSTYRMLSIALPCARAFDRATRVEKLFDCAPSEEEWAF 526
           E+ + ++V  E  L LD +T+WN+TY ML  A      F      +  +   PS E+W  
Sbjct: 378 ELKEQLQVPSEKVLSLDDQTQWNTTYMMLVAASELKEVFSCLDTADPDYKKPPSAEDWRH 437

Query: 527 ASEVVDRLKLFNDITAVFSGTNYVTSNIQLLKICEAKEQIRKWAVCGDSTIEEMSVEMIQ 586
              +   LK   +  +    T   ++     ++ + +  + +     D  +  ++  M +
Sbjct: 438 VEALCTFLKPLFEAVSTLQSTGNPSAVTFFHEVWKTQSDLSRAIAGEDPFVTGIAKTMQE 497

Query: 587 KFDKYWKDIQGPMGLATILDPRFKIDYLLGFIETITGQSSEECATKVAEVKDTLYDLMKE 646
           K DKYW+D    + +A ++DPRFK+  +      I G   E+    +  V D +++L  E
Sbjct: 498 KVDKYWRDCSLVLAMAVVMDPRFKMKLVEFSFSKIFG---EDAGKNIKTVDDGIHELFTE 554

Query: 647 YEVEDDEDNTESSAPPLVNSDLLSSITARVTSRRPAAIRVKSELDRYLEDELVSINTENF 706
           Y       NT S       +D LS     +         +KSELD+YL++ L+    + F
Sbjct: 555 YMALPSPQNTTSEGG---KADGLSDFDTYIMET--TGQNLKSELDQYLDETLLP-RVQEF 608

Query: 707 KILDWWKVAGTSFPTLRKVARDIFAIPVSTVASESAFSTSGRVLSEHRSRLTPELLEALM 766
            +LDWWK     +PTL K+ARDI +IPVS  A +  F    R + E+++ L PE +EAL+
Sbjct: 609 DVLDWWKQNKLKYPTLSKMARDILSIPVSAAAFDYVFDMEPREMDEYKTSLRPETVEALI 668

Query: 767 CSQDWL 772
           C+++WL
Sbjct: 669 CAREWL 674



>AT1G18560.1 | chr1:6385614-6388005 FORWARD LENGTH=691
          Length = 690

 Score =  117 bits (292), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 116/528 (21%), Positives = 215/528 (40%), Gaps = 39/528 (7%)

Query: 261 IILHEYPLSIVDHIGFRRFVSALQPLFKMVTRNTIRKDIMDTYEEEKKRALAYMAGAKSR 320
           + L   P S VD          L+P  ++      +  + + +   +      +   +S+
Sbjct: 145 LALSSLPPSTVDETWLGNSFKFLKPSIQLWPAEKYKAILDEVFTSMRGDVKTTLEHIQSK 204

Query: 321 VGITTDLWTSDNQKRGYMAITAHFIDDSWTLRSIIMRFIYVPAPHTAEVICEHLYEALVE 380
           V +T   W S  +   YM++T  +ID++W+   +++    +P P     I   L + L  
Sbjct: 205 VSVTLSFWNS-YENIFYMSVTGQWIDENWSSHRLLLDICRIPYPSGGSEIYNSLLKVLKT 263

Query: 381 WNLDEKISTLTLDNCTTNDKVISELIKKIGKRKLMLEGKLLHMRCAAHILNLIVRDGLDV 440
           + ++++I   T DN          L +    +K++      ++ CAA  LN I+ +GL  
Sbjct: 264 YAIEDRILCCTHDNSENAIHACHSLKEYFDGQKVL---PFCYIPCAAQTLNDIIDEGLAT 320

Query: 441 IKDSIAKVRESVAFWTATPKRVEKFEEIAKHVKVKMENKLGLDCKTRWNSTYRMLSIALP 500
           IK  I+KVRE      A+ +  + F ++    + +   KL +D  +RW+  Y+M++I   
Sbjct: 321 IKPIISKVREFTQELNASTELSDDFIQLTTAYQ-EGNWKLPIDASSRWSGNYQMVNILCK 379

Query: 501 CARAFDRATR-----VEKLFDCAPSEEEWAFASEVVDRLKLFNDITAVFSGTNYVTSNIQ 555
            +++ D   R     +E     +  E+           L  F+  T        +T  + 
Sbjct: 380 ASKSLDSVIRKNEDALENRMMLSSVEKNAVTIVHNYLDLDSFHKTTNDMCTNKDLTVGLA 439

Query: 556 LLKICEAKEQIRKWAVCGDST-----IEEMSVEMIQKFDKYWKDIQGPMGLAT-ILDPRF 609
           LL +    E I     C  S      +   +  M QK   Y   +       T ILDPR 
Sbjct: 440 LLFMDNISEMI---TTCQKSCHNPDWLRTCAESMAQKARSYNTQVCNVFTYITAILDPRI 496

Query: 610 KIDYLLGFIETITGQSSEECATKVAEVKDTLYDLMKEYEVEDDEDNTESSAPPLVNSDLL 669
           K +Y+    ETI  +S          + +     ++ Y       +  S   P    +  
Sbjct: 497 KTEYI---PETINLESY---------IDEARSHFIRNYSSSHFTSSMTSGYRPQEVDEGG 544

Query: 670 SSIT-----ARVTSRRPAAIRVKSELDRYLEDELVSINTENFKILDWWKVAGTSFPTLRK 724
            +I+     AR   R   +  V  EL +YL + +V + T+   +LDWWKV    +P L  
Sbjct: 545 GNISFAEEIARRKRRGSMSNNVVDELTQYLSESIVPMQTD---VLDWWKVNSGRYPRLSN 601

Query: 725 VARDIFAIPVSTVASESAFSTSGRVLSEHRSRLTPELLEALMCSQDWL 772
           +ARD  A+  ++ A E  F   G  + + +  +  +  ++++C + W+
Sbjct: 602 MARDFLAVQATSAAPEEIFCGKGEEIDKQKYCMPHDSTQSVICIRSWI 649



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.318    0.132    0.389 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 16,305,383
Number of extensions: 677710
Number of successful extensions: 2508
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 2500
Number of HSP's successfully gapped: 2
Length of query: 803
Length of database: 11,106,569
Length adjustment: 107
Effective length of query: 696
Effective length of database: 8,173,057
Effective search space: 5688447672
Effective search space used: 5688447672
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 116 (49.3 bits)