Os10g0170600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Zinc finger, BED-type predicted domain containing protein.
FiT-DB / Search/ Help/ Sample detail
|
Os10g0170600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Zinc finger, BED-type predicted domain containing protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 148.27 | 0.572 | 8.52 | -1.31 | 2.95 | -1.71 | 2.42 | 3.43 | -0.271 | 4.7 | 23.9 | 737 | -- | -- |
| 157.54 | 0.585 | 8.51 | -1.8 | 3.04 | -1.41 | 2.91 | -- | -0.268 | 4.74 | 23.22 | 743 | -- | -- |
| 160.36 | 0.59 | 8.61 | -2.06 | 2.72 | -1.43 | -- | -0.491 | -0.414 | 5.14 | 22.93 | 362 | -- | -- |
| 159.85 | 0.589 | 8.59 | -1.97 | 2.68 | -1.6 | -- | -- | -0.389 | 5.09 | 22.81 | 404 | -- | -- |
| 370.88 | 0.897 | 8.53 | -1.06 | -- | -4.12 | -- | 3.63 | -0.0122 | -- | 24.21 | 330 | -- | -- |
| 193.52 | 0.652 | 8.63 | -2.31 | 3.34 | -- | 2.33 | -- | -0.62 | 5.2 | -- | -- | -- | -- |
| 207.06 | 0.674 | 8.63 | -2.31 | 3.36 | -- | -- | -- | -0.631 | 5.24 | -- | -- | -- | -- |
| 376.51 | 0.904 | 8.58 | -1.52 | -- | -3.82 | -- | -- | -0.145 | -- | 24.2 | 322 | -- | -- |
| 250.49 | 0.737 | 8.49 | -- | 2.4 | -2.84 | -- | -- | 0.0112 | 5.68 | 16.5 | 240 | -- | -- |
| 796.97 | 1.32 | 8.67 | -2.19 | -- | -- | -- | -- | -0.547 | -- | -- | -- | -- | -- |
| 347.28 | 0.872 | 8.57 | -- | 3.32 | -- | -- | -- | -0.374 | 5.26 | -- | -- | -- | -- |
| 438.25 | 0.975 | 8.54 | -- | -- | -4.04 | -- | -- | 0.0376 | -- | 24.1 | 324 | -- | -- |
| 923.43 | 1.42 | 8.62 | -- | -- | -- | -- | -- | -0.304 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 140.81 | temperature | 20 | 14400 | < th | dose independent | rect. | 21 | 1 |
| 2 | 141.50 | temperature | 20 | 14400 | > th | dose independent | rect. | 21 | 1 |
| 4 | 143.16 | radiation | 40 | 43200 | > th | dose dependent | rect. | 10 | 1 |
| 6 | 143.33 | radiation | 40 | 43200 | < th | dose independent | rect. | 14 | 18 |
| 8 | 143.69 | radiation | 40 | 43200 | < th | dose independent | rect. | 14 | 5 |
| 9 | 143.69 | radiation | 10 | 43200 | < th | dose independent | rect. | 1 | 7 |
| 10 | 143.70 | radiation | 10 | 43200 | < th | dose independent | rect. | 3 | 5 |
| 15 | 143.70 | radiation | 40 | 43200 | < th | dose independent | rect. | 14 | 15 |
| 17 | 143.71 | radiation | 40 | 43200 | < th | dose independent | rect. | 14 | 8 |
| 34 | 143.78 | radiation | 20 | 43200 | < th | dose independent | rect. | 17 | 15 |
| 38 | 143.92 | radiation | 40 | 43200 | < th | dose independent | sin | 11 | NA |
| 39 | 143.92 | radiation | 40 | 43200 | < th | dose independent | rect. | 15 | 20 |
| 40 | 143.96 | radiation | 40 | 43200 | > th | dose dependent | rect. | 14 | 22 |
| 50 | 144.04 | radiation | 40 | 43200 | > th | dose dependent | rect. | 7 | 5 |
| 94 | 144.13 | radiation | 1 | 43200 | > th | dose dependent | rect. | 18 | 13 |
| 112 | 144.64 | radiation | 1 | 43200 | > th | dose dependent | rect. | 4 | 3 |
| 123 | 144.69 | radiation | 40 | 43200 | > th | dose dependent | sin | 11 | NA |
| 143 | 144.95 | radiation | 40 | 43200 | < th | dose independent | rect. | 2 | 9 |
| 146 | 144.96 | radiation | 40 | 43200 | < th | dose independent | rect. | 7 | 4 |
| 155 | 144.97 | radiation | 40 | 43200 | < th | dose independent | rect. | 18 | 17 |
| 164 | 145.19 | radiation | 10 | 43200 | < th | dose independent | sin | 10 | NA |
| 167 | 145.25 | radiation | 20 | 43200 | > th | dose dependent | rect. | 16 | 16 |
| 204 | 145.61 | radiation | 40 | 43200 | < th | dose independent | rect. | 10 | 1 |
| 226 | 145.78 | radiation | 10 | 43200 | < th | dose dependent | rect. | 1 | 6 |
| 253 | 145.88 | radiation | 20 | 43200 | > th | dose dependent | rect. | 6 | 2 |
| 269 | 146.04 | radiation | 40 | 43200 | < th | dose dependent | rect. | 1 | 6 |
| 282 | 146.13 | radiation | 30 | 43200 | < th | dose dependent | rect. | 21 | 10 |
| 373 | 146.66 | wind | 9 | 43200 | < th | dose independent | rect. | 13 | 2 |
| 438 | 146.91 | radiation | 20 | 43200 | < th | dose independent | rect. | 15 | 4 |
| 444 | 146.92 | radiation | 20 | 43200 | < th | dose independent | rect. | 15 | 13 |
| 475 | 147.25 | radiation | 40 | 43200 | > th | dose independent | rect. | 10 | 1 |
| 512 | 147.51 | radiation | 40 | 43200 | > th | dose dependent | rect. | 14 | 1 |
| 518 | 147.57 | wind | 9 | 43200 | > th | dose dependent | rect. | 13 | 2 |
| 606 | 147.85 | radiation | 40 | 43200 | < th | dose independent | rect. | 10 | 23 |
| 702 | 148.14 | temperature | 20 | 270 | > th | dose dependent | rect. | 11 | 22 |
| 706 | 148.16 | radiation | 40 | 43200 | < th | dose independent | rect. | 1 | 18 |
| 708 | 148.17 | radiation | 40 | 43200 | < th | dose independent | rect. | 7 | 10 |
| 717 | 148.17 | radiation | 40 | 43200 | < th | dose independent | rect. | 2 | 15 |
| 745 | 148.17 | radiation | 40 | 43200 | < th | dose independent | rect. | 7 | 20 |
| 769 | 148.18 | radiation | 40 | 43200 | < th | dose independent | no | NA | NA |
| 838 | 148.26 | temperature | 10 | 270 | > th | dose dependent | rect. | 13 | 12 |
| 889 | 148.40 | wind | 9 | 43200 | > th | dose independent | rect. | 13 | 2 |
| 975 | 148.70 | radiation | 40 | 43200 | > th | dose dependent | no | NA | NA |
| 980 | 148.70 | radiation | 40 | 43200 | > th | dose dependent | rect. | 7 | 9 |