Os10g0208800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description :
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Os10g0208800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description :
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 95.11 | 0.458 | 2.97 | -0.141 | 0.038 | -0.319 | -0.373 | 1.1 | 0.146 | 7.33 | 1 | 16 | -- | -- |
| 96.11 | 0.457 | 2.96 | -0.103 | 0.0424 | -0.239 | -0.47 | -- | 0.153 | 6.6 | 1.1 | 16 | -- | -- |
| 95.25 | 0.458 | 2.97 | -0.158 | 0.0572 | -0.255 | -- | 1.34 | 0.145 | 9.21 | 1 | 16 | -- | -- |
| 96.53 | 0.458 | 2.96 | -0.113 | 0.0559 | -0.251 | -- | -- | 0.155 | 9.12 | 1.1 | 16 | -- | -- |
| 95.44 | 0.457 | 2.97 | -0.159 | -- | -0.261 | -- | 1.35 | 0.145 | -- | 1 | 16 | -- | -- |
| 97.44 | 0.463 | 2.96 | -0.0688 | 0.0953 | -- | -0.438 | -- | 0.155 | 6.4 | -- | -- | -- | -- |
| 97.91 | 0.463 | 2.95 | -0.0743 | 0.0935 | -- | -- | -- | 0.157 | 6.72 | -- | -- | -- | -- |
| 96.71 | 0.458 | 2.96 | -0.105 | -- | -0.254 | -- | -- | 0.16 | -- | 1.098 | 16 | -- | -- |
| 96.81 | 0.458 | 2.95 | -- | 0.0591 | -0.23 | -- | -- | 0.168 | 9.15 | 1.1 | 16 | -- | -- |
| 98.37 | 0.463 | 2.96 | -0.0721 | -- | -- | -- | -- | 0.159 | -- | -- | -- | -- | -- |
| 98.05 | 0.463 | 2.95 | -- | 0.0926 | -- | -- | -- | 0.165 | 6.77 | -- | -- | -- | -- |
| 96.99 | 0.459 | 2.95 | -- | -- | -0.24 | -- | -- | 0.171 | -- | 1.067 | 16 | -- | -- |
| 98.5 | 0.463 | 2.96 | -- | -- | -- | -- | -- | 0.167 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 86.23 | temperature | 25.0 | 90 | > th | dose independent | rect. | 1 | 3 |
| 2 | 86.49 | temperature | 25.0 | 90 | > th | dose dependent | rect. | 2 | 2 |
| 3 | 86.75 | temperature | 25.0 | 270 | > th | dose independent | rect. | 1 | 1 |
| 4 | 86.99 | temperature | 25.0 | 90 | > th | dose dependent | rect. | 1 | 4 |
| 19 | 88.39 | wind | 3.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 20 | 88.41 | wind | 1.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 23 | 88.44 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 3 | 1 |
| 25 | 88.46 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 26 | 88.47 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 28 | 88.48 | humidity | 80.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 36 | 88.51 | humidity | 70.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 39 | 88.53 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 46 | 88.56 | temperature | 10.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 48 | 88.56 | temperature | 30.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 49 | 88.56 | humidity | 50.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 53 | 88.56 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 55 | 88.56 | radiation | 1.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 60 | 88.56 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 2 | 1 |
| 61 | 88.56 | temperature | 10.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 62 | 88.56 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 67 | 88.56 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 76 | 88.61 | wind | 9.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 77 | 88.61 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 80 | 88.61 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 84 | 88.61 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 93 | 88.61 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 94 | 88.61 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 114 | 88.61 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 4 | 23 |
| 117 | 88.61 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 3 | 1 |
| 128 | 88.68 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 134 | 88.82 | temperature | 20.0 | 10 | < th | dose independent | rect. | 11 | 1 |
| 140 | 88.82 | humidity | 90.0 | 90 | > th | dose independent | rect. | 10 | 1 |
| 142 | 88.82 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 10 | 1 |
| 159 | 88.82 | temperature | 20.0 | 90 | < th | dose dependent | rect. | 10 | 1 |
| 160 | 88.82 | temperature | 20.0 | 10 | < th | dose dependent | rect. | 11 | 1 |
| 166 | 88.82 | humidity | 90.0 | 90 | > th | dose dependent | rect. | 10 | 1 |
| 168 | 88.82 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 10 | 1 |
| 193 | 88.89 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 211 | 89.10 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 213 | 89.13 | wind | 1.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 274 | 89.87 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 3 | 23 |
| 275 | 89.87 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 283 | 90.01 | wind | 9.0 | 30 | < th | dose independent | rect. | 3 | 23 |
| 288 | 90.21 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 1 | 1 |
| 311 | 90.89 | atmosphere | 1005.0 | 10 | > th | dose dependent | rect. | 2 | 3 |
| 354 | 91.84 | humidity | 50.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 381 | 92.18 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 10 | 7 |
| 393 | 92.31 | temperature | 25.0 | 720 | < th | dose independent | rect. | 23 | 6 |
| 412 | 92.56 | wind | 1.0 | 30 | < th | dose independent | rect. | 24 | 3 |
| 417 | 92.58 | temperature | 30.0 | 30 | < th | dose independent | rect. | 3 | 23 |
| 420 | 92.61 | temperature | 25.0 | 30 | > th | dose independent | rect. | 7 | 1 |
| 440 | 92.76 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 10 | 7 |
| 447 | 92.79 | temperature | 25.0 | 720 | > th | dose independent | rect. | 20 | 7 |
| 468 | 92.90 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 14 | 3 |
| 472 | 92.93 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 16 | 3 |
| 479 | 92.96 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 14 | 3 |
| 515 | 93.18 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 16 | 1 |
| 517 | 93.18 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 16 | 1 |
| 526 | 93.22 | humidity | 90.0 | 270 | > th | dose independent | rect. | 16 | 1 |
| 527 | 93.22 | humidity | 90.0 | 270 | > th | dose dependent | rect. | 16 | 1 |
| 541 | 93.27 | wind | 1.0 | 10 | < th | dose independent | rect. | 13 | 14 |
| 544 | 93.28 | humidity | 90.0 | 90 | > th | dose dependent | rect. | 16 | 3 |
| 546 | 93.29 | wind | 1.0 | 10 | < th | dose independent | rect. | 21 | 6 |
| 567 | 93.34 | temperature | 15.0 | 720 | < th | dose independent | rect. | 1 | 1 |
| 569 | 93.34 | temperature | 15.0 | 720 | < th | dose dependent | rect. | 1 | 1 |
| 617 | 93.45 | wind | 1.0 | 30 | < th | dose independent | rect. | 17 | 1 |
| 620 | 93.45 | humidity | 90.0 | 10 | > th | dose independent | rect. | 17 | 1 |
| 639 | 93.45 | wind | 1.0 | 30 | < th | dose dependent | rect. | 17 | 1 |
| 642 | 93.45 | humidity | 90.0 | 10 | > th | dose dependent | rect. | 17 | 1 |
| 685 | 93.52 | temperature | 25.0 | 10 | > th | dose independent | rect. | 4 | 1 |
| 707 | 93.55 | wind | 1.0 | 30 | < th | dose dependent | rect. | 14 | 4 |
| 712 | 93.56 | temperature | 25.0 | 90 | > th | dose dependent | rect. | 4 | 1 |
| 731 | 93.60 | humidity | 90.0 | 90 | > th | dose dependent | rect. | 10 | 9 |
| 737 | 93.61 | humidity | 80.0 | 4320 | < th | dose dependent | rect. | 2 | 1 |
| 742 | 93.62 | temperature | 25.0 | 720 | < th | dose independent | rect. | 19 | 10 |
| 754 | 93.65 | humidity | 90.0 | 90 | > th | dose dependent | rect. | 13 | 6 |
| 772 | 93.69 | wind | 1.0 | 10 | > th | dose independent | rect. | 18 | 10 |
| 777 | 93.71 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 2 | 3 |
| 779 | 93.71 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 15 | 2 |
| 789 | 93.73 | atmosphere | 1015.0 | 30 | < th | dose independent | rect. | 3 | 23 |
| 824 | 93.80 | humidity | 90.0 | 10 | < th | dose independent | rect. | 4 | 1 |
| 829 | 93.80 | wind | 1.0 | 10 | > th | dose independent | rect. | 18 | 13 |
| 880 | 93.89 | temperature | 20.0 | 10 | > th | dose independent | rect. | 2 | 3 |
| 884 | 93.90 | wind | 1.0 | 10 | > th | dose independent | rect. | 5 | 23 |
| 895 | 93.93 | temperature | 25.0 | 720 | > th | dose independent | sin | 12 | NA |
| 910 | 93.96 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 3 | 23 |