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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os01g0170400

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : HAT dimerisation domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 2.98 (0.0207) R2 : 0.00611
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.073 (0.0436) R2dN8 : 0.00789 R2N8 : 0.00611
σ : 0.39
deviance : 69.76
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = atmosphere, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
67.4 0.386 2.99 0.124 0.0289 -0.177 -0.228 -0.0517 0.0532 0.146 1009 14 -- --
67.38 0.385 2.99 0.125 0.0305 -0.175 -0.236 -- 0.0555 0.0212 1009 14 -- --
67.59 0.386 2.99 0.13 0.0343 -0.17 -- -0.0658 0.0568 2.1 1009 14 -- --
67.59 0.385 2.99 0.133 0.0348 -0.169 -- -- 0.0569 2.02 1009 9 -- --
67.66 0.385 2.99 0.13 -- -0.169 -- -0.0713 0.0578 -- 1009 14 -- --
69.24 0.39 2.98 0.112 0.0243 -- -0.174 -- 0.0846 1.76 -- -- -- --
69.31 0.39 2.98 0.117 0.0383 -- -- -- 0.0851 4.88 -- -- -- --
67.66 0.385 2.99 0.134 -- -0.167 -- -- 0.058 -- 1009 9 -- --
68.05 0.386 2.99 -- 0.0371 -0.163 -- -- 0.043 2.19 1009 9 -- --
69.39 0.389 2.98 0.119 -- -- -- -- 0.0861 -- -- -- -- --
69.67 0.39 2.98 -- 0.0405 -- -- -- 0.0721 4.79 -- -- -- --
68.13 0.386 2.99 -- -- -0.162 -- -- 0.044 -- 1009 9 -- --
69.76 0.39 2.98 -- -- -- -- -- 0.073 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 61.26 radiation 10.0 10 > th dose independent rect. 6 1
27 61.26 radiation 10.0 10 > th dose dependent rect. 6 1
53 62.25 temperature 15.0 1440 > th dose independent rect. 21 1
54 62.27 temperature 15.0 30 > th dose independent rect. 21 23
58 62.29 temperature 30.0 1440 < th dose independent rect. 21 1
62 62.29 humidity 50.0 1440 > th dose independent rect. 21 1
68 62.29 atmosphere 995.0 1440 > th dose independent rect. 21 1
69 62.29 radiation 1.0 1440 < th dose independent rect. 21 1
89 62.29 temperature 10.0 1440 > th dose independent rect. 22 23
92 62.30 wind 3.0 30 > th dose independent rect. 20 1
93 62.30 atmosphere 1005.0 30 > th dose independent rect. 20 1
94 62.30 atmosphere 1005.0 30 > th dose dependent rect. 20 1
95 62.30 radiation 30.0 1440 < th dose dependent rect. 21 1
105 62.32 temperature 25.0 30 > th dose independent rect. 20 1
106 62.32 humidity 80.0 30 > th dose independent rect. 20 1
107 62.32 humidity 90.0 30 < th dose independent rect. 20 1
108 62.32 wind 1.0 30 > th dose dependent rect. 20 1
113 62.33 wind 5.0 30 < th dose independent rect. 20 1
116 62.33 temperature 10.0 30 > th dose independent rect. 20 1
119 62.33 temperature 30.0 30 < th dose independent rect. 20 1
120 62.33 humidity 50.0 30 > th dose independent rect. 20 1
123 62.33 atmosphere 995.0 30 > th dose independent rect. 20 1
125 62.33 atmosphere 1010.0 30 < th dose independent rect. 20 1
127 62.33 radiation 1.0 30 < th dose independent rect. 20 1
132 62.33 precipitation 0.1 30 < th dose independent rect. 20 1
134 62.33 temperature 10.0 30 > th dose dependent rect. 20 1
137 62.33 radiation 1.0 30 < th dose dependent rect. 20 1
144 62.33 precipitation 0.1 30 < th dose dependent rect. 20 1
145 62.34 humidity 50.0 30 > th dose dependent rect. 20 1
147 62.35 wind 9.0 30 < th dose dependent rect. 20 1
151 62.36 humidity 90.0 30 < th dose dependent rect. 20 1
152 62.37 temperature 30.0 30 < th dose dependent rect. 20 1
157 62.39 atmosphere 1015.0 30 < th dose dependent rect. 20 1
161 62.42 wind 9.0 30 < th dose independent rect. 21 23
208 62.61 atmosphere 995.0 30 > th dose independent rect. 21 23
221 62.94 precipitation 0.1 30 < th dose independent rect. 21 23
222 62.94 precipitation 0.1 30 < th dose dependent rect. 21 23
232 63.61 wind 9.0 1440 < th dose independent rect. 21 1
244 64.19 humidity 50.0 30 > th dose independent rect. 21 23
251 64.50 wind 3.0 30 < th dose dependent rect. 6 1
252 64.52 atmosphere 1005.0 30 > th dose dependent rect. 6 1
293 64.93 precipitation 0.1 1440 < th dose independent rect. 21 1
294 64.93 precipitation 0.1 1440 < th dose dependent rect. 21 1
305 65.12 atmosphere 1010.0 10 < th dose independent rect. 21 23
315 65.29 temperature 25.0 720 > th dose dependent rect. 21 12
318 65.34 humidity 80.0 30 > th dose dependent rect. 6 1
321 65.35 temperature 30.0 30 < th dose dependent rect. 6 1
326 65.42 temperature 10.0 30 > th dose dependent rect. 21 23
349 65.87 wind 3.0 30 < th dose independent rect. 6 1
372 66.08 wind 1.0 30 > th dose independent rect. 21 23
414 66.19 radiation 10.0 30 < th dose dependent rect. 21 23
420 66.22 humidity 90.0 30 < th dose independent rect. 6 1
424 66.24 wind 9.0 1440 < th dose independent rect. 7 1
425 66.24 temperature 10.0 1440 > th dose independent rect. 7 1
429 66.24 temperature 30.0 1440 < th dose independent rect. 7 1
433 66.24 humidity 50.0 1440 > th dose independent rect. 7 1
438 66.24 atmosphere 995.0 1440 > th dose independent rect. 7 1
439 66.24 atmosphere 1015.0 1440 < th dose independent rect. 7 1
440 66.24 temperature 10.0 1440 > th dose independent rect. 8 23
451 66.27 temperature 25.0 10 > th dose independent rect. 6 1
452 66.27 atmosphere 1000.0 30 > th dose independent rect. 6 1
456 66.28 wind 1.0 30 > th dose independent rect. 6 1
460 66.28 temperature 10.0 30 > th dose independent rect. 6 1
462 66.28 temperature 30.0 30 < th dose independent rect. 6 1
463 66.28 humidity 50.0 30 > th dose independent rect. 6 1
468 66.28 atmosphere 1015.0 30 < th dose independent rect. 6 1
469 66.28 radiation 20.0 30 < th dose independent rect. 6 1
472 66.28 precipitation 0.1 30 < th dose independent rect. 6 1
473 66.28 temperature 10.0 30 > th dose independent rect. 7 23
474 66.28 precipitation 0.1 30 < th dose dependent rect. 6 1
478 66.29 radiation 10.0 10 < th dose dependent rect. 6 1
481 66.31 temperature 30.0 30 < th dose independent rect. 21 23
483 66.32 radiation 10.0 30 < th dose independent rect. 21 23
491 66.36 temperature 25.0 720 > th dose independent rect. 24 9
492 66.36 radiation 1.0 720 < th dose dependent rect. 21 8
494 66.37 radiation 1.0 720 < th dose independent rect. 21 8
498 66.38 temperature 10.0 720 > th dose independent rect. 9 8
499 66.38 atmosphere 1015.0 720 < th dose independent rect. 9 8
501 66.38 temperature 10.0 720 > th dose independent rect. 17 16
510 66.42 temperature 25.0 720 > th dose independent rect. 2 7
520 66.45 temperature 10.0 720 > th dose independent rect. 21 8
521 66.45 temperature 30.0 720 < th dose independent rect. 21 8
522 66.45 humidity 50.0 720 > th dose independent rect. 21 8
525 66.45 atmosphere 995.0 720 > th dose independent rect. 21 8
529 66.45 temperature 10.0 720 > th dose independent rect. 5 16
542 66.55 precipitation 0.1 720 < th dose independent rect. 9 8
543 66.55 temperature 10.0 30 > th dose dependent rect. 6 1
545 66.55 precipitation 0.1 720 < th dose dependent rect. 9 8
546 66.56 wind 9.0 720 < th dose independent rect. 21 8
557 66.59 temperature 25.0 720 > th dose dependent rect. 3 5
615 66.73 wind 9.0 30 < th dose independent rect. 7 23
633 66.79 temperature 15.0 720 > th dose independent rect. 19 8
635 66.80 temperature 15.0 720 > th dose independent rect. 3 16
639 66.81 temperature 15.0 720 > th dose independent rect. 7 8
640 66.81 temperature 15.0 720 > th dose independent rect. 15 16
645 66.83 precipitation 0.1 720 < th dose independent rect. 21 8
647 66.83 precipitation 0.1 720 < th dose dependent rect. 21 8
651 66.84 wind 9.0 720 < th dose independent rect. 19 8
655 66.85 temperature 30.0 720 < th dose independent rect. 19 8
656 66.85 humidity 50.0 720 > th dose independent rect. 19 8
658 66.85 atmosphere 995.0 720 > th dose independent rect. 19 8
659 66.85 radiation 1.0 720 < th dose independent rect. 19 8
665 66.85 atmosphere 1015.0 720 < th dose independent rect. 3 16
669 66.85 radiation 1.0 720 < th dose dependent rect. 19 8
675 66.86 radiation 40.0 720 < th dose independent rect. 15 16
676 66.86 radiation 40.0 720 < th dose independent rect. 17 16
685 66.89 wind 9.0 720 < th dose independent rect. 17 16
692 66.90 atmosphere 1015.0 720 < th dose independent rect. 7 8
694 66.91 temperature 25.0 90 > th dose independent rect. 22 21
708 66.97 wind 1.0 30 < th dose independent rect. 2 1
729 66.99 atmosphere 1015.0 720 < th dose independent rect. 5 16
733 66.99 wind 3.0 30 < th dose dependent rect. 2 1
735 66.99 atmosphere 1015.0 30 < th dose dependent rect. 2 1
743 67.00 temperature 25.0 30 < th dose independent rect. 2 1
754 67.01 humidity 80.0 30 > th dose independent rect. 2 1
763 67.02 temperature 10.0 30 > th dose independent rect. 2 1
766 67.02 humidity 50.0 30 > th dose independent rect. 2 1
769 67.02 atmosphere 995.0 30 > th dose independent rect. 2 1
770 67.02 atmosphere 1010.0 30 < th dose independent rect. 2 1
772 67.02 radiation 1.0 30 < th dose independent rect. 2 1
777 67.02 precipitation 0.1 30 < th dose independent rect. 2 1
779 67.02 temperature 10.0 30 > th dose independent rect. 3 23
780 67.02 temperature 10.0 30 > th dose dependent rect. 2 1
781 67.02 humidity 50.0 30 > th dose dependent rect. 2 1
785 67.02 radiation 1.0 30 < th dose dependent rect. 2 1
790 67.02 precipitation 0.1 30 < th dose dependent rect. 2 1
794 67.03 atmosphere 995.0 720 > th dose independent rect. 17 16
801 67.04 precipitation 0.1 720 < th dose independent rect. 17 16
802 67.04 atmosphere 1005.0 30 > th dose dependent rect. 2 1
803 67.04 precipitation 0.1 720 < th dose dependent rect. 17 16
805 67.05 wind 9.0 720 < th dose independent rect. 15 16
806 67.05 atmosphere 1010.0 10 < th dose independent rect. 4 16
813 67.06 temperature 25.0 720 < th dose independent rect. 1 8
814 67.06 temperature 30.0 30 < th dose dependent rect. 2 1
815 67.06 atmosphere 995.0 30 > th dose dependent rect. 2 1
820 67.08 atmosphere 1005.0 30 > th dose independent rect. 2 1
883 67.11 atmosphere 1010.0 10 < th dose independent rect. 3 23
908 67.14 precipitation 0.1 720 < th dose independent rect. 5 16
911 67.14 precipitation 0.1 720 < th dose dependent rect. 5 16
915 67.15 radiation 10.0 30 < th dose independent rect. 21 11
920 67.16 wind 9.0 720 < th dose independent rect. 7 8
952 67.19 temperature 10.0 720 > th dose dependent rect. 8 1
1000 67.23 humidity 90.0 10 < th dose dependent rect. 6 1