Os05g0102300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : HAT dimerisation domain containing protein.
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Os05g0102300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : HAT dimerisation domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 35.62 | 0.28 | 10.3 | 0.674 | 0.0543 | 0.865 | -0.348 | 0.757 | 0.235 | 8 | 17.63 | 726 | -- | -- |
| 35.98 | 0.279 | 10.3 | 0.534 | 0.0593 | 0.847 | -0.52 | -- | 0.194 | 7.96 | 18.7 | 724 | -- | -- |
| 35.9 | 0.279 | 10.3 | 0.676 | 0.0645 | 0.884 | -- | 0.875 | 0.235 | 9.29 | 17.52 | 713 | -- | -- |
| 36.72 | 0.282 | 10.3 | 0.526 | 0.067 | 0.857 | -- | -- | 0.195 | 8.94 | 18.8 | 719 | -- | -- |
| 36.05 | 0.28 | 10.3 | 0.736 | -- | 0.795 | -- | 1.03 | 0.261 | -- | 18.2 | 730 | -- | -- |
| 49.19 | 0.329 | 10.3 | 0.772 | 0.189 | -- | 0.682 | -- | 0.349 | 19.9 | -- | -- | -- | -- |
| 50.54 | 0.333 | 10.3 | 0.754 | 0.189 | -- | -- | -- | 0.35 | 20 | -- | -- | -- | -- |
| 36.92 | 0.283 | 10.3 | 0.519 | -- | 0.817 | -- | -- | 0.199 | -- | 18.8 | 757 | -- | -- |
| 43.4 | 0.307 | 10.3 | -- | 0.0935 | 0.862 | -- | -- | 0.135 | 20.3 | 17.82 | 2108 | -- | -- |
| 52.49 | 0.339 | 10.3 | 0.752 | -- | -- | -- | -- | 0.347 | -- | -- | -- | -- | -- |
| 65.53 | 0.379 | 10.3 | -- | 0.185 | -- | -- | -- | 0.266 | 20.3 | -- | -- | -- | -- |
| 42.67 | 0.304 | 10.4 | -- | -- | 0.869 | -- | -- | 0.0289 | -- | 18 | 7662 | -- | -- |
| 67.41 | 0.383 | 10.3 | -- | -- | -- | -- | -- | 0.264 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 34.03 | temperature | 20 | 720 | > th | dose dependent | rect. | 18 | 17 |
| 6 | 34.66 | temperature | 20 | 720 | > th | dose dependent | sin | 9 | NA |
| 16 | 34.93 | temperature | 20 | 1440 | > th | dose dependent | rect. | 18 | 1 |
| 37 | 35.22 | temperature | 10 | 1440 | > th | dose dependent | rect. | 18 | 1 |
| 48 | 35.32 | temperature | 30 | 1440 | < th | dose dependent | rect. | 18 | 1 |
| 67 | 35.43 | temperature | 10 | 720 | > th | dose dependent | rect. | 23 | 23 |
| 79 | 35.51 | temperature | 10 | 720 | > th | dose dependent | rect. | 1 | 23 |
| 86 | 35.54 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 23 |
| 97 | 35.58 | temperature | 15 | 720 | > th | dose dependent | rect. | 21 | 23 |
| 116 | 35.63 | temperature | 30 | 14400 | < th | dose independent | rect. | 15 | 3 |
| 119 | 35.64 | temperature | 30 | 14400 | > th | dose independent | rect. | 15 | 3 |
| 126 | 35.67 | temperature | 10 | 720 | > th | dose dependent | rect. | 8 | 23 |
| 144 | 35.70 | temperature | 30 | 720 | < th | dose dependent | rect. | 16 | 19 |
| 151 | 35.71 | temperature | 30 | 14400 | < th | dose independent | rect. | 15 | 9 |
| 152 | 35.71 | temperature | 30 | 14400 | < th | dose independent | rect. | 15 | 11 |
| 214 | 35.79 | temperature | 15 | 720 | > th | dose dependent | no | NA | NA |
| 228 | 35.80 | temperature | 15 | 720 | > th | dose dependent | rect. | 1 | 21 |
| 274 | 35.86 | temperature | 20 | 1440 | > th | dose dependent | sin | 16 | NA |
| 305 | 35.88 | temperature | 20 | 1440 | > th | dose dependent | rect. | 10 | 23 |
| 318 | 35.89 | temperature | 20 | 1440 | > th | dose dependent | rect. | 3 | 23 |
| 319 | 35.89 | temperature | 20 | 1440 | > th | dose dependent | rect. | 6 | 23 |
| 388 | 35.94 | temperature | 20 | 1440 | > th | dose dependent | rect. | 10 | 19 |
| 468 | 36.00 | temperature | 10 | 720 | > th | dose dependent | rect. | 10 | 23 |
| 555 | 36.09 | temperature | 30 | 14400 | > th | dose independent | sin | 13 | NA |
| 569 | 36.10 | temperature | 20 | 1440 | > th | dose dependent | rect. | 10 | 12 |
| 578 | 36.11 | temperature | 30 | 14400 | < th | dose independent | sin | 13 | NA |
| 696 | 36.21 | temperature | 20 | 1440 | > th | dose dependent | sin | 5 | NA |
| 793 | 36.26 | temperature | 20 | 1440 | > th | dose dependent | rect. | 1 | 12 |