BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os05g0374700 Os05g0374700|Os05g0374700
(466 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os05g0374700 817 0.0
Os10g0520550 352 2e-97
Os03g0377450 308 4e-84
Os06g0527166 276 2e-74
Os12g0428300 Retrotransposon gag protein family protein 251 7e-67
Os01g0341500 239 3e-63
Os03g0827200 214 2e-55
Os04g0192400 197 1e-50
Os05g0276900 171 1e-42
AK106323 149 3e-36
Os09g0387900 146 3e-35
Os02g0522000 Retrotransposon gag protein family protein 138 9e-33
Os08g0451600 Peptidase aspartic, catalytic domain containin... 136 3e-32
Os08g0285400 126 3e-29
Os03g0156800 Cyclin-like F-box domain containing protein 125 5e-29
Os02g0519400 124 1e-28
Os03g0300700 Retrotransposon gag protein family protein 110 3e-24
Os07g0195900 100 3e-21
Os05g0312200 97 2e-20
Os05g0555400 89 1e-17
Os12g0271900 84 3e-16
Os03g0682700 84 3e-16
Os10g0383200 Chromo domain containing protein 83 4e-16
Os04g0666200 82 9e-16
Os11g0676800 82 9e-16
Os05g0241900 Retrotransposon gag protein family protein 79 8e-15
Os01g0204400 79 1e-14
Os01g0571666 78 1e-14
Os12g0450264 78 1e-14
Os06g0638300 78 1e-14
Os09g0135100 Conserved hypothetical protein 78 1e-14
Os01g0392300 75 1e-13
Os04g0316700 75 2e-13
Os04g0683300 74 2e-13
Os03g0147100 Retrotransposon gag protein family protein 73 5e-13
Os12g0264400 71 2e-12
Os10g0558300 71 2e-12
Os04g0191000 Retrotransposon gag protein family protein 67 4e-11
>Os05g0374700
Length = 466
Score = 817 bits (2110), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/453 (89%), Positives = 405/453 (89%)
Query: 14 RISHTXXXXXXXXXQEDRTILKEITGEVRLGEVLAVLGPSGSGKSTLVSILGGRLTGQHA 73
RISHT QEDRTILKEITGEVRLGEVLAVLGPSGSGKSTLVSILGGRLTGQHA
Sbjct: 14 RISHTGAGGGGGGAQEDRTILKEITGEVRLGEVLAVLGPSGSGKSTLVSILGGRLTGQHA 73
Query: 74 GMGVVPCRAVAHGVRLDLERTLTTAPIKLSAPLCQXXXXXXXXXXXXXXXXTQKMEAMDD 133
GMGVVPCRAVAHGVRLDLERTLTTAPIKLSAPLCQ TQKMEAMDD
Sbjct: 74 GMGVVPCRAVAHGVRLDLERTLTTAPIKLSAPLCQSLESMEGKLLEKLELLTQKMEAMDD 133
Query: 134 KMTKHGGRLDQAVVKVDLALEAVGKXXXXXXXXXXXXKSLASSDQVSILGSPSAVSLGNA 193
KMTKHGGRLDQAVVKVDLALEAVGK KSLASSDQVSILGSPSAVSLGNA
Sbjct: 134 KMTKHGGRLDQAVVKVDLALEAVGKLQQDQLQAARLQKSLASSDQVSILGSPSAVSLGNA 193
Query: 194 GVSXXXXXXXXXXXRFHTRPVFIRNEAESSQGFDQGVRAKSCLPKMDFPRFDGSDVRIWL 253
GVS RFHTRPVFIRNEAESSQGFDQGVRAKSCLPKMDFPRFDGSDVRIWL
Sbjct: 194 GVSPPPPLPPPPPPRFHTRPVFIRNEAESSQGFDQGVRAKSCLPKMDFPRFDGSDVRIWL 253
Query: 254 DMCETYFDMYQIPAMFKVSAAVLHMSGNVAQWYQSFKLVEEICDWSQFRYAVALEFESTA 313
DMCETYFDMYQIPAMFKVSAAVLHMSGNVAQWYQSFKLVEEICDWSQFRYAVALEFESTA
Sbjct: 254 DMCETYFDMYQIPAMFKVSAAVLHMSGNVAQWYQSFKLVEEICDWSQFRYAVALEFESTA 313
Query: 314 QREKVQALQTLRQTGSVADYKSQFDSLVYQVRVFDPSVGGMMLLYRFILGLKEEIRSAVL 373
QREKVQALQTLRQTGSVADYKSQFDSLVYQVRVFDPSVGGMMLLYRFILGLKEEIRSAVL
Sbjct: 314 QREKVQALQTLRQTGSVADYKSQFDSLVYQVRVFDPSVGGMMLLYRFILGLKEEIRSAVL 373
Query: 374 VQLPDTVQQAAAIALVQESVLLDSGQKPLKKLTYKGVGAKVDTSVPVSEPSAIQLEGAEL 433
VQLPDTVQQAAAIALVQESVLLDSGQKPLKKLTYKGVGAKVDTSVPVSEPSAIQLEGAEL
Sbjct: 374 VQLPDTVQQAAAIALVQESVLLDSGQKPLKKLTYKGVGAKVDTSVPVSEPSAIQLEGAEL 433
Query: 434 WKAKQLKEYRRANGLCFKCGDKYSPDHQCVITG 466
WKAKQLKEYRRANGLCFKCGDKYSPDHQCVITG
Sbjct: 434 WKAKQLKEYRRANGLCFKCGDKYSPDHQCVITG 466
>Os10g0520550
Length = 364
Score = 352 bits (904), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 184/341 (53%), Positives = 224/341 (65%), Gaps = 12/341 (3%)
Query: 128 MEAMDDKMTKHGGRLDQAVVKVDLALEAVGKXXXXXXXXXXXXKSLAS-SDQVSILGSPS 186
M +D + GG L++ KVDLA++ VGK K +A+ SDQ ILGSPS
Sbjct: 16 MHEIDQWLDSQGGSLEKVTTKVDLAMDFVGKVQQECAELARSMKRVANCSDQAGILGSPS 75
Query: 187 AVSLGNAGVSXXXXXXXXXXXRFHTRPVFIRNEAESSQGFDQGV-RAKSCLPKMDFPRFD 245
G+S + + + + +GF G+ R LPKMDFPRFD
Sbjct: 76 -------GISQVSASGSATPPPLNPPVPPVLDGVDLGRGFGDGIYRRHQPLPKMDFPRFD 128
Query: 246 GSDVRIWLDMCETYFDMYQIPAMFKVSAAVLHMSGNVAQWYQSFKLVEEICDWSQFRYAV 305
GSDVRIWL+MCETYFDMYQI FKVSA VLHMSGN AQWY S+KLV E+ W QFR AV
Sbjct: 129 GSDVRIWLNMCETYFDMYQITQNFKVSAVVLHMSGNAAQWYHSYKLVNEVNSWDQFRMAV 188
Query: 306 ALEFESTAQREKVQALQTLRQTGSVADYKSQFDSLVYQVRVFDPSVGGMMLLYRFILGLK 365
A EFE +REK+ AL TL QTG+V +YK QFD LVYQ+RVFDPSVGG ML+ RF+ GL
Sbjct: 189 ATEFEGVVEREKMSALDTLTQTGTVTEYKQQFDYLVYQIRVFDPSVGGKMLVTRFMNGLT 248
Query: 366 EEIRSAVLVQLPDTVQQAAAIALVQESVLLDSGQKPLKKLTYKGVGAKVDTSVPVSEPSA 425
EEIR+AV+VQLPDTVQQ++AIAL+QESVL K LK K K D S S+ +
Sbjct: 249 EEIRAAVVVQLPDTVQQSSAIALMQESVLASRATKALKGKFVKLPQYKSDVS---SDTTP 305
Query: 426 IQLEGAELWKAKQLKEYRRANGLCFKCGDKYSPDHQCVITG 466
Q++ +LWKAKQLK+YRRA GLCFKCGDKY+P+H+C + G
Sbjct: 306 GQVDKGDLWKAKQLKDYRRAQGLCFKCGDKYTPEHRCAVGG 346
>Os03g0377450
Length = 350
Score = 308 bits (790), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 150/163 (92%), Positives = 156/163 (95%)
Query: 304 AVALEFESTAQREKVQALQTLRQTGSVADYKSQFDSLVYQVRVFDPSVGGMMLLYRFILG 363
A + +FESTAQ EKVQALQTLRQTGSVADYKSQFDSLVYQVRVFDPSVGGMMLLYRFILG
Sbjct: 188 ASSNQFESTAQCEKVQALQTLRQTGSVADYKSQFDSLVYQVRVFDPSVGGMMLLYRFILG 247
Query: 364 LKEEIRSAVLVQLPDTVQQAAAIALVQESVLLDSGQKPLKKLTYKGVGAKVDTSVPVSEP 423
LKEEIRS +LVQLPDTVQQAAAIALVQESVLLDSGQKPLKKLTYKGVG KVDTSVP+SEP
Sbjct: 248 LKEEIRSVLLVQLPDTVQQAAAIALVQESVLLDSGQKPLKKLTYKGVGTKVDTSVPISEP 307
Query: 424 SAIQLEGAELWKAKQLKEYRRANGLCFKCGDKYSPDHQCVITG 466
SAI+ E AELWKAKQLKEYRRANG+CFKCGDKYSPDHQCVITG
Sbjct: 308 SAIKPERAELWKAKQLKEYRRANGICFKCGDKYSPDHQCVITG 350
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 66/113 (58%), Positives = 69/113 (61%), Gaps = 6/113 (5%)
Query: 67 RLTGQHAGMG-VVPCRAVAHGVRLDLERTLTTAPIKLSAPLCQXXXXXXXXXXXXXXXXT 125
R+T +A M V CR V LDLERTLTT PIKLSAPL Q T
Sbjct: 85 RVTSYNARMTFTVTCR-----VWLDLERTLTTTPIKLSAPLRQSLESMEGKLLEKLELLT 139
Query: 126 QKMEAMDDKMTKHGGRLDQAVVKVDLALEAVGKXXXXXXXXXXXXKSLASSDQ 178
QKMEAMDDKMTKHGGRLD AVVKVDLALEAVGK KSLASS+Q
Sbjct: 140 QKMEAMDDKMTKHGGRLDHAVVKVDLALEAVGKLQQDQLQAAQLQKSLASSNQ 192
>Os06g0527166
Length = 303
Score = 276 bits (707), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 137/222 (61%), Positives = 165/222 (74%), Gaps = 2/222 (0%)
Query: 229 GVRAKSCLPKMDFPRFDGSDVRIWLDMCETYFDMYQIPAMFKVSAAVLHMSGNVAQWYQS 288
G RAKS LPKMDF RF+G DV IW+DMCETYF MYQI A F VSA +LHM GN AQWYQS
Sbjct: 83 GGRAKSYLPKMDFLRFEGPDVHIWIDMCETYFKMYQISATFWVSATILHMYGNAAQWYQS 142
Query: 289 FKLVEEICDWSQFRYAVALEFESTAQREKVQALQTLRQTGSVADYKSQFDSLVYQVRVFD 348
KLVE++ DW+ FRY V EFE REK AL+ L QTG+VA+YK Q DSLVYQVR+FD
Sbjct: 143 VKLVEDVSDWAHFRYVVIHEFEGNTHREKTLALRLLTQTGTVAEYKQQIDSLVYQVRLFD 202
Query: 349 PSVGGMMLLYRFILGLKEEIRSAVLVQLPDTVQQAAAIALVQESVLLDSGQKPLKKLTYK 408
PSVGGMML+ RF+LGLK+E+R+AVL+QL T+QQA A+AL QE +LLDS +K+L K
Sbjct: 203 PSVGGMMLVSRFVLGLKQEVRNAVLLQLSQTIQQATAVALTQEGLLLDSS-PSMKRLPAK 261
Query: 409 GVGAKVDTSVPVSEPSAIQLEGAELWKAKQLKEYRRANGLCF 450
KV+ V +E ++ E AE WKA QL ++R+ NGLCF
Sbjct: 262 KFVPKVERLVG-TETLGLKPEQAEPWKAWQLSDFRKDNGLCF 302
>Os12g0428300 Retrotransposon gag protein family protein
Length = 545
Score = 251 bits (642), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 142/350 (40%), Positives = 195/350 (55%), Gaps = 22/350 (6%)
Query: 125 TQKMEAMDDKMTKHGGRLDQAVVKVDLALEAVGKXXXXXXXXXXXXKSLASSD------- 177
T+ +E +D K+ HG RLD+ K+DL++ ++G+ K+ A++
Sbjct: 26 TKHLEEIDAKLVSHGERLDRVQAKMDLSMTSLGQVQQEQSQVARVLKAAAAAPSSAAPST 85
Query: 178 ---QVSILGSPSAVSLGNAGVSXXXXXXXXXXXRFHTRP--VFIRNEAESSQGFDQGVRA 232
Q +L +P S ++ F RP V +S+G D R
Sbjct: 86 PHGQPPLLETPRGASSATTSLTPPPPPPPPPPPPFGRRPPQVSSSPSLSASEGGDSAPR- 144
Query: 233 KSCLPKMDFPRFDGSDVRIWLDMCETYFDMYQIPAMFKVSAAVLHMSGNVAQWYQSFKLV 292
+ PKMDFPRFDG+DVR+WLD CETYF YQI F+VSAA L+M G+ A WYQ++KL
Sbjct: 145 RQWTPKMDFPRFDGTDVRVWLDNCETYFGFYQITEGFQVSAASLNMIGDAANWYQAWKLE 204
Query: 293 EEICDWSQFRYAVALEFESTAQREKVQALQTLRQTGSVADYKSQFDSLVYQVRVFDPSVG 352
+W + AV EFE + K+ L L QTGSV +Y+S+F+ LVYQ+R++DP +
Sbjct: 205 TGWHNWESLKTAVLNEFEVNLESVKMDELLLLTQTGSVTEYRSKFNQLVYQLRLYDPLLS 264
Query: 353 GMMLLYRFILGLKEEIRSAVLVQLPDTVQQAAAIALVQESVLLDSGQKPLKKLTYKGVGA 412
L+ F+LGLK+E+RSAV Q P +V QA +AL ES L +G KK YK
Sbjct: 265 DTFLIRHFLLGLKDELRSAVQAQQPTSVSQAYLVALAHESAQLGTGT---KKGHYK---- 317
Query: 413 KVDTSVPVSEPSAIQLEGAELWKAKQLKEYRRANGLCFKCGDKYSPDHQC 462
V + ++L ELWKA+QLKEYRRA GLCFKCG+KY+P H C
Sbjct: 318 --KEHVAIRGTDKLKLAPGELWKAQQLKEYRRAQGLCFKCGEKYAPGHVC 365
>Os01g0341500
Length = 420
Score = 239 bits (610), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 136/337 (40%), Positives = 188/337 (55%), Gaps = 21/337 (6%)
Query: 126 QKMEAMDDKMTKHGGRLDQAVVKVDLALEAVGKXXXXXXXXXXXXKSLASSDQVSILGSP 185
Q++ +D K+ K G RLD KVDL++ ++G+ K+ A+ +
Sbjct: 27 QQLTQIDSKLEKQGARLDAVQSKVDLSMASLGQVQCEQALMTKALKAAATPSSPLLPTPR 86
Query: 186 SAVSLGNAGVSXXXXXXXXXXXRFHTRPVFIRNEAESSQGFDQGVRAKSCLPKMDFPRFD 245
+S A S R PV R+ ++ QG R S +PKMDFP+FD
Sbjct: 87 PTLSQDAASTSTQPPPEVEVPVRSGQPPV--RDNSDV-----QGRR--SWVPKMDFPKFD 137
Query: 246 GSDVRIWLDMCETYFDMYQIPAMFKVSAAVLHMSGNVAQWYQSFKLVEEICDWSQFRYAV 305
G+DV +W+D CETYF +YQI FKVSAA L+M G+ A WYQ++K W Q R AV
Sbjct: 138 GTDVCVWVDNCETYFALYQITEGFKVSAASLNMIGDAAHWYQAWKQERGWPTWEQLREAV 197
Query: 306 ALEFESTAQREKVQALQTLRQTGSVADYKSQFDSLVYQVRVFDPSVGGMMLLYRFILGLK 365
EFE +R K++ L L QTG+V++Y+S+F LVY +R++DP+ G+ L+ RF++GLK
Sbjct: 198 LNEFEINIKRAKMEELLLLTQTGTVSEYRSKFLQLVYHIRLYDPATSGLFLVSRFVMGLK 257
Query: 366 EEIRSAVLVQLPDTVQQAAAIALVQESVLLDSGQKPLKKLTYKGVGAKVDTSVPVSEPSA 425
+E+R V Q P+TV QAA +AL E + K + G K VPV
Sbjct: 258 DELRCFVAAQEPETVHQAARVALAFEGAFCNRKVAFKKDVGNVKFGDK--GKVPV----- 310
Query: 426 IQLEGAELWKAKQLKEYRRANGLCFKCGDKYSPDHQC 462
+LWKA+QLKEYRR +GLCFKCG+KYSP H C
Sbjct: 311 -----GDLWKAQQLKEYRRTHGLCFKCGEKYSPAHTC 342
>Os03g0827200
Length = 437
Score = 214 bits (544), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 112/226 (49%), Positives = 142/226 (62%), Gaps = 9/226 (3%)
Query: 237 PKMDFPRFDGSDVRIWLDMCETYFDMYQIPAMFKVSAAVLHMSGNVAQWYQSFKLVEEIC 296
PKMDFP+F GSDVR+WLD CET+F YQI +KVSAAVL+MSG+ A WYQ +K +
Sbjct: 143 PKMDFPKFSGSDVRVWLDNCETFFLFYQIADGYKVSAAVLNMSGDAANWYQEWKFEQGWH 202
Query: 297 DWSQFRYAVALEFESTAQREKVQALQTLRQTGSVADYKSQFDSLVYQVRVFDPSVGGMML 356
DW + A+ EFE + K+ L L QTG V+DY+S+F+ LVYQ+R++DP + L
Sbjct: 203 DWPMLKAALLGEFEVHLKYVKMDELLLLTQTGFVSDYRSKFNQLVYQIRLYDPLLSPNFL 262
Query: 357 LYRFILGLKEEIRSAVLVQLPDTVQQAAAIALVQESVLLDSGQKPLKKLTYKGVGAKVDT 416
+ +F+LGLK+E+R V Q P +V QA +AL ES L SG K VG +
Sbjct: 263 IRQFLLGLKDELRVPVQAQQPTSVTQAFLVALAYESALPSSGSKKSVSKKNFQVGRGGEK 322
Query: 417 SVPVSEPSAIQLEGAELWKAKQLKEYRRANGLCFKCGDKYSPDHQC 462
+L ELWKA+QLKEYRRA GLCFKCGDKY P H C
Sbjct: 323 Q---------KLAPGELWKAQQLKEYRRAQGLCFKCGDKYIPGHVC 359
>Os04g0192400
Length = 637
Score = 197 bits (501), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 99/227 (43%), Positives = 136/227 (59%), Gaps = 9/227 (3%)
Query: 237 PKMDFPRFDGSDVRIWLDMCETYFDMYQIPAMFKVSAAVLHMSGNVAQWYQSFKLVEEIC 296
PKMDFP+FDG+ V++W+D CETYF YQI F VSA +++ G+ A WYQ++KL
Sbjct: 406 PKMDFPKFDGNGVKVWIDNCETYFAFYQITEAFLVSATSMNLMGDAANWYQTWKLEVGWH 465
Query: 297 DWSQFRYAVALEFESTAQREKVQALQTLRQTGSVADYKSQFDSLVYQVRVFDPSVGGMML 356
DW + A++ EF+ K+ L L+QT +V +Y S+F LVYQ+R++DP + G +L
Sbjct: 466 DWEMLKTAISREFDVHLWSVKMDELLLLKQTSTVIEYCSKFSELVYQIRLYDPLLCGSVL 525
Query: 357 LYRFILGLKEEIRSAVLVQLPDTVQQAAAIALVQESVLLDSGQKPLKKLTYKGVGAKVDT 416
+ F+LGLK+++RS V P TV Q +AL QE + +K + VG +
Sbjct: 526 VSHFMLGLKDDLRSFVQAAQPTTVTQDCLVALAQEGAHIGQPRKRFNQCRDNAVGRGNEK 585
Query: 417 SVPVSEPSAIQLEGAELWKAKQLKEYRRANGLCFKCGDKYSPDHQCV 463
+L ELWKA+QLKEYRRA GLCFKCGDKY CV
Sbjct: 586 P---------KLARGELWKAQQLKEYRRAQGLCFKCGDKYVSGQVCV 623
>Os05g0276900
Length = 212
Score = 171 bits (433), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 97/203 (47%), Positives = 116/203 (57%), Gaps = 31/203 (15%)
Query: 264 QIPAMFKVSAAVLHMSGNVAQWYQSFKLVEEICDWSQFRYAVALEFESTAQREKVQALQT 323
QI F +S VLH+ G+ AQWYQSFKLV + DW F AV EFE + E ALQT
Sbjct: 35 QILENFMISGVVLHLIGDAAQWYQSFKLVTPVHDWPHFCQAVIEEFECETEHETTFALQT 94
Query: 324 LRQTGSVADYKSQFDSLVYQVRVFDPSVGGMMLLYRFILGLKEEIRSAVLVQLPDTVQQA 383
QT SVADYK FDSLVYQVR+FD + G
Sbjct: 95 FTQTDSVADYKKAFDSLVYQVRLFDLAYG------------------------------- 123
Query: 384 AAIALVQESVLLDSGQKPLKKLTYKGVGAKVDTSVPVSEPSAIQLEGAELWKAKQLKEYR 443
AA+AL QE VL K KKL +K + K D S+ + S ++ E +LWKAKQLK+YR
Sbjct: 124 AAVALAQEEVLSMQSHKSHKKLQFKPIVYKPDQSIVSVDTSPVKFEKGDLWKAKQLKDYR 183
Query: 444 RANGLCFKCGDKYSPDHQCVITG 466
RANGLCFKCG KYSP+H+CV+ G
Sbjct: 184 RANGLCFKCGQKYSPEHKCVLQG 206
>AK106323
Length = 400
Score = 149 bits (377), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 84/257 (32%), Positives = 130/257 (50%), Gaps = 35/257 (13%)
Query: 236 LPKMDFPRFDGSDVRIWLDMCETYFDMYQIPAMFKVSAAVLHMSGNVAQWYQSFKLVEEI 295
+PK+DFP+FDGSD + W CE YFD+ V A ++ G A W +S +
Sbjct: 56 VPKLDFPKFDGSDSQEWRMKCEHYFDVNNTFPGLWVRIATIYFLGRAASWLRSSRAHLRF 115
Query: 296 CDWSQFRYAVALEFESTAQREKVQALQTLRQTGSVADYKSQFDSLVYQVRVFDPSVGGMM 355
W F AV+ +F+ ++ + +++Q G+V ++ +FD L+ Q+ V+DP++
Sbjct: 116 PMWEDFCAAVSAKFDRDQHENLIRQMDSIKQNGTVWEFYERFDELMNQLLVYDPTLSSKY 175
Query: 356 LLYRFILGLKEEIRSAVLVQLPDTVQQAAAIALVQESVLLDS------------------ 397
L +RF GL+ EIR+AVL+Q P ++ A A+AL+QE V+ +S
Sbjct: 176 LTHRFTKGLRREIRNAVLLQRPKDLESALAVALLQEEVMENSPPTTVREFKKSDGSSSLK 235
Query: 398 ----GQKPLKKLTYKGVGAKVD-------TSVPVSEPSAIQLEGAELWKAKQLKEYRRAN 446
G PL KG G V +S V P+++ K LK YRRA
Sbjct: 236 INGKGAWPLPLPPGKGGGVPVSNRADERRSSDTVRSPTSLTE------KVSALKSYRRAQ 289
Query: 447 GLCFKCGDKYSPDHQCV 463
GLC+ C +K+SP+H+C
Sbjct: 290 GLCYVCAEKWSPNHKCA 306
>Os09g0387900
Length = 268
Score = 146 bits (368), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 82/219 (37%), Positives = 117/219 (53%), Gaps = 4/219 (1%)
Query: 126 QKMEAMDDKMTKHGGRLDQAVVKVDLALEAVGKXXXXXXXXXXXXKSLASSDQV---SIL 182
+K+E MD K+ K G RLDQ KVDL+LE++G+ K + V +
Sbjct: 27 EKLEVMDKKLEKQGERLDQVQAKVDLSLESLGQVLQEQIHVMQAVKRTVPATLVIPTRTM 86
Query: 183 GSPSAVSLGNAGVSXXXXXXXXXXXRFHTRPVFIRNEAESSQGFDQGVRAKSCLPKMDFP 242
+ S+V+ V+ R T + E ++G + +PKMDFP
Sbjct: 87 EATSSVTREQPQVTIPMPTLTPPP-RVETGETHAPHLGEGNRGVAHENHFRRNMPKMDFP 145
Query: 243 RFDGSDVRIWLDMCETYFDMYQIPAMFKVSAAVLHMSGNVAQWYQSFKLVEEICDWSQFR 302
+FDG D +W+D CETYF MYQIPA FKVSAA L++ G + WY+++K + W +FR
Sbjct: 146 KFDGPDASVWVDNCETYFAMYQIPAGFKVSAASLNLLGKASHWYKAWKQKVGLHVWEEFR 205
Query: 303 YAVALEFESTAQREKVQALQTLRQTGSVADYKSQFDSLV 341
AV EF+ K A+ L+QTGSV ++KSQFD L+
Sbjct: 206 DAVVKEFDCGTHHIKANAMFELKQTGSVDEHKSQFDDLM 244
>Os02g0522000 Retrotransposon gag protein family protein
Length = 380
Score = 138 bits (348), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 75/227 (33%), Positives = 121/227 (53%), Gaps = 9/227 (3%)
Query: 236 LPKMDFPRFDGSDVRIWLDMCETYFDMYQIPAMFKVSAAVLHMSGNVAQWYQSFKLVEEI 295
LPK +FPRFDG + ++W E YFDMYQ+P + A LH GN A W Q+++ + +
Sbjct: 154 LPKTNFPRFDGDNPKLWKKNSEKYFDMYQVPYDSWANFATLHFVGNAALWLQTYEALHSV 213
Query: 296 CDWSQFRYAVALEFESTAQREKVQALQTLRQTGSVADYKSQFDSLVYQVRVFDPSVGGMM 355
W + V +F +E ++ L++LRQT V Y S+F+ L+++V V++ +
Sbjct: 214 ETWPELCVVVHNKFGKDKYQEHLEELESLRQTSGVDAYYSKFEELMHRVLVYNQAFDETY 273
Query: 356 LLYRFILGLKEEIRSAVLVQLPDTVQQAAAIALVQESVLLD---SGQKPLKKLTYKGVGA 412
+ +F+ GLK EI++A+ + P TV A ++A QE + L+ GQK K +K
Sbjct: 274 FVTKFVGGLKTEIKAAIKLHKPRTVDAALSLAKTQEDLALEIKKGGQKSTYKEGFKSTAF 333
Query: 413 KVDTS----VPVSEPSAIQLEGAELWKA--KQLKEYRRANGLCFKCG 453
+V+ + + + E W+ + LK R+A G CFKCG
Sbjct: 334 RVNYQGKGILGQAPDDTTKTEEKPKWEDCFESLKAARKAKGECFKCG 380
>Os08g0451600 Peptidase aspartic, catalytic domain containing protein
Length = 707
Score = 136 bits (343), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 66/106 (62%), Positives = 84/106 (79%)
Query: 361 ILGLKEEIRSAVLVQLPDTVQQAAAIALVQESVLLDSGQKPLKKLTYKGVGAKVDTSVPV 420
+LGLKE+IR+AV+VQLP TVQQAAA+AL+QESVLL+ K K+L YK + K +
Sbjct: 1 MLGLKEDIRAAVMVQLPTTVQQAAAVALMQESVLLELSTKQSKRLMYKPLPTKGELPQGG 60
Query: 421 SEPSAIQLEGAELWKAKQLKEYRRANGLCFKCGDKYSPDHQCVITG 466
++ AI+ E AELWKA+QL++YRRANGLCFKCGDKYSP+HQC + G
Sbjct: 61 TDTPAIKPERAELWKARQLRDYRRANGLCFKCGDKYSPEHQCALGG 106
>Os08g0285400
Length = 326
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 66/160 (41%), Positives = 101/160 (63%), Gaps = 10/160 (6%)
Query: 304 AVALEFESTAQREKVQALQTLRQTGSVADYKSQFDSLVYQVRVFDPS-VGGMMLLYRFIL 362
AV EF+S K A+ L+QTGSV +YKSQFD L+Y ++++D + +G + + F+
Sbjct: 77 AVVNEFDSGTHHIKANAMFELKQTGSVDEYKSQFDDLMYNIKLYDNTELGTVWEVGHFVA 136
Query: 363 GLKEEIRSAVLVQLPDTVQQAAAIALVQESVLLDSGQKPLKKLTYKGVGAKVDTSVPVSE 422
GLK+ +++ VL +LP+T+ QA +A +E V+ + Q K G K+ S +
Sbjct: 137 GLKDALKTHVLSKLPETISQAYHLAKAKERVMGEVMQGK------KKWGMKIGRSKGGDK 190
Query: 423 PSAIQLEGAELWKAKQLKEYRRANGLCFKCGDKYSPDHQC 462
++ +LWKA+QLKEYRR +GLCF+CG+KYSP+HQC
Sbjct: 191 S---KISTGDLWKAQQLKEYRRIHGLCFRCGEKYSPNHQC 227
>Os03g0156800 Cyclin-like F-box domain containing protein
Length = 723
Score = 125 bits (315), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 72/164 (43%), Positives = 100/164 (60%), Gaps = 16/164 (9%)
Query: 305 VALEFESTAQREKVQALQTLRQTGSVADYKSQFDSL--VYQVRVFDPSVGGMMLLYRFIL 362
+A++ Q+E + +++++ S +D S + Q+RVFDPSVGG ML+ RF+
Sbjct: 39 LAMDSVGKVQQECAELARSMKRVASCSDQAGILGSPSGISQIRVFDPSVGGKMLVTRFMN 98
Query: 363 GLKEEIRSAVLVQLPDTVQQAAAIALVQESVLLDSGQKPLKKLTYKGVGAKVDTSVPVSE 422
GL EEIR+AV+VQLPDT ESVL K LK K K D S S+
Sbjct: 99 GLTEEIRAAVVVQLPDT-----------ESVLASRATKALKGKFVKLPQYKSDVS---SD 144
Query: 423 PSAIQLEGAELWKAKQLKEYRRANGLCFKCGDKYSPDHQCVITG 466
+ +++ +LWKAKQLK+YRRA GLCFKCGDKY+P+H+C + G
Sbjct: 145 TTPGRVDKGDLWKAKQLKDYRRAQGLCFKCGDKYTPEHRCAVGG 188
>Os02g0519400
Length = 312
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 78/199 (39%), Positives = 105/199 (52%), Gaps = 38/199 (19%)
Query: 264 QIPAMFKVSAAVLHMSGNVAQWYQSFKLVEEICDWSQFRYAVALEFESTAQREKVQALQT 323
QIPA FKVSAA L++ G A WY++++ + W FR AV EF+ K A+
Sbjct: 67 QIPAGFKVSAASLNLVGKAAHWYKAWRQRVGLHGWELFRDAVVREFDFGTHHIKANAMFE 126
Query: 324 LRQTGSVADYKSQFDSLVYQVRVFDPSVGGMMLLYRFILGLKEEIRSAVLVQLPDTVQQA 383
L+QTG+V +YKSQFD L+Y V+++D R LG V +A
Sbjct: 127 LKQTGTVDEYKSQFDDLLYNVKLYD----------RTELG---------------EVWEA 161
Query: 384 AAIALVQESVLLDSGQKPLKKLTYKGVGAKVDTSVPVSEPSAIQLEGAELWKAKQLKEYR 443
A ESV+ + + K G + S +P + ELWKA+QLKEYR
Sbjct: 162 KA----NESVMGEVAE------GKKKWGFRTGRSKGGEKP---KFSTGELWKAQQLKEYR 208
Query: 444 RANGLCFKCGDKYSPDHQC 462
R +GLCFKCG+KYSP+HQC
Sbjct: 209 RIHGLCFKCGEKYSPNHQC 227
>Os03g0300700 Retrotransposon gag protein family protein
Length = 244
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 61/160 (38%), Positives = 88/160 (55%), Gaps = 3/160 (1%)
Query: 236 LPKMDFPRFDGSDVRIWLDMCETYFDMYQIPAMFKVSAAVLHMSGNVAQWYQSFKLVEEI 295
L K+ FP F G+ R+W+ C YF+ Y +P VS A +HM G W +++ E
Sbjct: 71 LAKLKFPTFSGTFPRLWITKCTRYFEFYGMPMKMWVSWASMHMEGMAELWMMTYEKRHER 130
Query: 296 CDWSQFRYAVALEFESTAQREKVQALQTLRQTG--SVADYKSQFDSLVYQVRVFDPSVGG 353
DW +F AV F ++K+ AL LRQ G +V++Y+ QF+ +Y ++FDP
Sbjct: 131 -DWGRFCEAVEERFGPYDHKQKLTALLDLRQEGIMTVSEYRDQFEERLYHAKLFDPVSSN 189
Query: 354 MMLLYRFILGLKEEIRSAVLVQLPDTVQQAAAIALVQESV 393
+ FI GL+EEIR + Q P TV AA ALVQE++
Sbjct: 190 CFDVALFIRGLREEIRDRMWQQTPATVDAAAQSALVQEAL 229
>Os07g0195900
Length = 527
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 61/131 (46%), Positives = 78/131 (59%), Gaps = 19/131 (14%)
Query: 336 QFDSLVYQVRVFDPSVG-GMMLLYRFILGLKEEIRSAVLVQLPDTVQQAAAIALVQESVL 394
QF+ LVY +R+++P++ G +L+ +FI GLKEE+R V Q P V QA AL E
Sbjct: 126 QFNQLVYHIRLYNPAITQGSVLVSQFIRGLKEELRYNVHAQQPVIVTQAYMAALAFE--- 182
Query: 395 LDSGQKPLKKLTYK---GVGAKVDTSVPVSEPSAIQLEGAELWKAKQLKEYRRANGLCFK 451
G + L K K GVG D S ++ ELWKA+QLK+YRRANGLCFK
Sbjct: 183 ---GAQQLNKSFVKKDTGVGKFGDKG-----KSTLR----ELWKAQQLKDYRRANGLCFK 230
Query: 452 CGDKYSPDHQC 462
CG+KYSP H C
Sbjct: 231 CGEKYSPTHVC 241
>Os05g0312200
Length = 113
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/120 (50%), Positives = 78/120 (65%), Gaps = 11/120 (9%)
Query: 320 ALQTLRQTGSVADYKSQFDSLVYQVRVFDPSVGGMMLLYRFILGLKEEIRSAVLVQLPDT 379
AL L QT +VA YK QFDSLVY++RVFDPS GMML+ RF+ GLK+EIR AV+VQL DT
Sbjct: 3 ALDALTQTRTVAKYKHQFDSLVYRIRVFDPS--GMMLVTRFLGGLKDEIRFAVVVQL-DT 59
Query: 380 VQQAAAIALVQESVLLDSGQKPLKKLTYKGVGAKVDTSVPV--SEPSAIQLEGAELWKAK 437
+QQA AIAL QE+VL + K KG K P +E + + + +LWK++
Sbjct: 60 LQQAVAIALKQETVLAEKATKT------KGKFVKYTCPKPDFGAETTPARSDKGDLWKSR 113
>Os05g0555400
Length = 409
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/74 (66%), Positives = 52/74 (70%), Gaps = 4/74 (5%)
Query: 14 RISHTXXXXXXXXXQEDRTILKEITGEVRLGEVLAVLGPSGSGKSTLVSILGGRLTGQHA 73
RISH QE+RTILK IT +VR EVLAVLGPSG GKSTLVSILGGRL G+HA
Sbjct: 213 RISHAGAGGGGGGAQEERTILKGITDKVRPWEVLAVLGPSGRGKSTLVSILGGRLAGRHA 272
Query: 74 GM----GVVPCRAV 83
GM G PCRAV
Sbjct: 273 GMVLAGGRAPCRAV 286
>Os12g0271900
Length = 614
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 68/132 (51%)
Query: 238 KMDFPRFDGSDVRIWLDMCETYFDMYQIPAMFKVSAAVLHMSGNVAQWYQSFKLVEEICD 297
+DFP F+G + W+ E YF +YQ P KV A +H+SG QW +S +
Sbjct: 189 NVDFPTFEGDYLESWIRKAEKYFSLYQTPEEDKVLLAEVHISGRADQWIESLAIATASLS 248
Query: 298 WSQFRYAVALEFESTAQREKVQALQTLRQTGSVADYKSQFDSLVYQVRVFDPSVGGMMLL 357
W +F+ + F + ++ E + + L+Q GSV Y +F+ + V+ +P++ L
Sbjct: 249 WPEFKTMLCQRFAAKSKIEITETFRNLKQYGSVDSYIDKFEDTMTLVKRSNPTLTKDYFL 308
Query: 358 YRFILGLKEEIR 369
FI GLK+ I+
Sbjct: 309 DYFISGLKDNIK 320
>Os03g0682700
Length = 442
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 99/225 (44%), Gaps = 12/225 (5%)
Query: 238 KMDFPRFDGSDVRIWLDMCETYFDMYQIPAMFKVSAAVLHMSGNVAQWYQSFKLVEEICD 297
+++ F+G D WL CE +F+M P V+ A H+ G +W+++ + +
Sbjct: 213 RLELTLFNGEDAVGWLQQCEKFFEMTGTPVDQWVNLASGHLVGRAGKWFRNLAIPWYCLN 272
Query: 298 WSQFRYAVALEFESTAQREKVQALQTLRQTGSVADYKSQFDSLVYQVRVFDPSVGGMMLL 357
W QF V F E V+ LQ +QTGSV Y +F+ V V+ P + +L
Sbjct: 273 WQQFYLMVLDRFTEANAHEAVELLQNAKQTGSVMQYIDKFEDCVSLVKRDHPYLTESYIL 332
Query: 358 YRFILGLKEEIRSAVLVQLPDTVQQAAAIALVQESVLLDSGQKPLKKLTYKGVGAKVDTS 417
FI GL+ +I+ V Q P + A V E + K+L+Y+ ++ + +
Sbjct: 333 SCFIGGLRADIKHDVCGQKPQNLLAGYWYAKVYEKASI------AKRLSYQ---SEFNRN 383
Query: 418 VPVSEPSAIQLEGAELWKAKQLKE-YRRANGLCFKCGDKYSPDHQ 461
P +P+ Q G K + + C+ C + ++ H+
Sbjct: 384 KPQFQPA--QSSGTRFVNQKNTTQGVEKEKKTCWYCKEPWNYQHK 426
>Os10g0383200 Chromo domain containing protein
Length = 400
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 88/201 (43%), Gaps = 33/201 (16%)
Query: 208 RFHTRPVFIRNEAESSQGFDQGVRAKSCLPKMDFPRFDGSDVRIWLDMCETYFDMYQIPA 267
RF P+ S Q LPK DFP+FDG + ++W E YF+MYQ+
Sbjct: 115 RFPNSPITFDIGESSVQNQSSNRFHGPRLPKSDFPKFDGDNPKLWKKNSEKYFEMYQVSY 174
Query: 268 MFKVSAAVLHMSGNVAQWYQSFKLVEEICDWSQFRYAVALEFESTAQREKVQALQTLRQT 327
+ LH GN A W Q+ + + + W + AV +F +E ++ L+ LR
Sbjct: 175 ENWAKFSTLHFVGNAALWLQTNEALHSVETWPELCIAVHSKFGKDKYQEHLEELEGLR-- 232
Query: 328 GSVADYKSQFDSLVYQVRVFDPSVGGMMLLYRFILGLKEEIRSAVLVQLPDTVQQAAAIA 387
L+ F+ GLK EI++A+ + P TV A ++A
Sbjct: 233 ------------LI------------------FVGGLKTEIKAAIKLHRPRTVDTALSLA 262
Query: 388 LVQESVLLDSGQKPLKKLTYK 408
QE ++L+ +K +KL YK
Sbjct: 263 KTQEELVLEL-KKGTQKLGYK 282
>Os04g0666200
Length = 500
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 103/245 (42%), Gaps = 27/245 (11%)
Query: 218 NEAESSQGFDQGVRAKSCLPKMDFPRFDGSDVRIWLDMCETYFDMYQIPAMFKVSAAVLH 277
N A D R+++ +DFP F+G W+ E YF +YQ P KV A +H
Sbjct: 273 NYAHRPHSADPAKRSRN----VDFPTFEGDYPESWIRKAEKYFSLYQTPEEDKVLLAEVH 328
Query: 278 MSGNVAQWYQSFKLVEEICDWSQFRYAVALEFESTAQREKVQALQTLRQTGSVADYKSQF 337
+SG QW +S + W +F+ V F + ++ E + + L+Q GSV Y +F
Sbjct: 329 ISGRADQWIESSAVPTASLSWPEFKTMVCQRFAAKSKIEITETFRNLKQYGSVDSYIDKF 388
Query: 338 DSLVYQVRVFDPSVGGMMLLYRFILGLKEEI----RSAVLVQLPDTVQQAAAIALVQESV 393
+ + V+ +P++ L FI GLK I +S + L + A ++ S
Sbjct: 389 EETMALVKRSNPTLTEDYFLDYFISGLKGHIKRPLKSLSIYSLVTAYEHARNYDVIPRSA 448
Query: 394 LLDSGQKPLKKLTYKGVGAKVDTSVPVSEPSAIQLEGAELWKAKQLKEYRRANGLCFKCG 453
++ P + T K +P P+ + + + +G CF+C
Sbjct: 449 --NTSSIPSNRETPK---------IPPKHPTKDDKQSTVT--------HTKFSGKCFRCN 489
Query: 454 DKYSP 458
+ + P
Sbjct: 490 EPWVP 494
>Os11g0676800
Length = 584
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 83/169 (49%), Gaps = 5/169 (2%)
Query: 210 HTRPVFIRNEAESSQGFDQGVRAKSCLPKMDFPRFDGSDVRIWLDMCETYFDMYQIPAMF 269
H+RP + + E+ + ++ P+++ P F G D WL CE ++++ P
Sbjct: 192 HSRPGGMVYQGENQHYAEAVIKG----PRLEIPLFTGEDPIDWLKQCEKFYEITGTPYDQ 247
Query: 270 KVSAAVLHMSGNVAQWYQSFKLVEEICDWSQFRYAVALEFESTAQREKVQALQTLRQTGS 329
V+ A+ H+ G +W++ + ++ W Q+ + V+ F + + E V+ Q ++Q GS
Sbjct: 248 WVNLAIAHLQGRAMKWFRGVGIPWQLIPWPQWCHMVSTRFSAANEHEAVELFQNVKQYGS 307
Query: 330 -VADYKSQFDSLVYQVRVFDPSVGGMMLLYRFILGLKEEIRSAVLVQLP 377
V Y +F+ V VR P + L FI GL+E+I+ V Q P
Sbjct: 308 TVEQYIDKFEEYVDLVRRDHPYLQEQYLNSCFIGGLREDIKHDVCGQKP 356
>Os05g0241900 Retrotransposon gag protein family protein
Length = 578
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 97/233 (41%), Gaps = 27/233 (11%)
Query: 237 PKMDFPRFDGSDVRIWLDMCETYFDMYQIPAMFKVSAAVLHMSGNVAQWYQSFKLVEEIC 296
P+++ P F G D WL CE +F++ P V+ AV H++G +W+ L ++
Sbjct: 96 PRLEIPLFSGEDPIDWLKQCEKFFEITGTPLDQWVNLAVAHLNGRALKWFGGIGLPWQVI 155
Query: 297 DWSQFRYAVALEFESTAQREKVQALQTLRQTG-SVADYKSQFDSLVYQVRVFDPSVGGMM 355
W Q+ V F + ++ E ++ Q ++Q G +V Y +F+ V V+ P +
Sbjct: 156 AWPQWCSMVCTRFSAASEHEAIELFQNVKQFGTTVEQYIDKFEDYVDLVKRDHPYLQEQY 215
Query: 356 LLYRFILGLKEEIRSAVLVQLP----DTVQQAAAIALVQESVLLDSGQKPLKKLTYKGVG 411
L FI GL+ +I+ V Q P +T A A +V + + Q PL
Sbjct: 216 LTSCFIGGLRADIKYDVCGQKPQGLLETYWAANARKMVG-NFNRNRNQNPL--------- 265
Query: 412 AKVDTSVPVSEPSAIQLEGAELWKAKQLKEYRRANGLCFKCGDKYSPDHQCVI 464
Q A + + RR C+ C + + P HQC I
Sbjct: 266 ------------GGNQGRNANHRGQNRGEGDRREEKKCWFCKEPWFPRHQCKI 306
>Os01g0204400
Length = 142
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/82 (48%), Positives = 53/82 (64%), Gaps = 3/82 (3%)
Query: 385 AIALVQESVLLDSGQKPLKKLTYKGVGAKVDTSVPVSEPSAIQLEGAELWKAKQLKEYRR 444
++ VQESVL K LK K K D S S+ + +++ +LWKAKQLK+YRR
Sbjct: 43 SVGKVQESVLASRATKALKGKFVKLPQYKSDIS---SDTAPGRVDKEDLWKAKQLKDYRR 99
Query: 445 ANGLCFKCGDKYSPDHQCVITG 466
A GLCFKCGDKY+P+H+C + G
Sbjct: 100 AQGLCFKCGDKYTPEHRCAVGG 121
>Os01g0571666
Length = 708
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 82/169 (48%), Gaps = 5/169 (2%)
Query: 210 HTRPVFIRNEAESSQGFDQGVRAKSCLPKMDFPRFDGSDVRIWLDMCETYFDMYQIPAMF 269
H+RP + + E+ + ++ P+++ P F G D WL CE ++++ P
Sbjct: 182 HSRPGGMVYQGENQHYAEAVIKG----PRLEIPLFTGEDPIDWLKQCEKFYEITGTPYDQ 237
Query: 270 KVSAAVLHMSGNVAQWYQSFKLVEEICDWSQFRYAVALEFESTAQREKVQALQTLRQTGS 329
V+ A+ H+ G +W++ + ++ W Q+ + V+ F + + E V+ Q ++Q GS
Sbjct: 238 WVNLAIAHLQGRAMKWFRGVGIPWQLIPWPQWCHMVSTRFSAANEHEAVELFQNVKQYGS 297
Query: 330 -VADYKSQFDSLVYQVRVFDPSVGGMMLLYRFILGLKEEIRSAVLVQLP 377
V Y +F+ V VR P + L FI GL+ +I+ V Q P
Sbjct: 298 TVEQYIDKFEEYVDLVRRDHPYLQEQYLNSCFIGGLRGDIKHDVCGQKP 346
>Os12g0450264
Length = 640
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 80/164 (48%), Gaps = 4/164 (2%)
Query: 217 RNEAESSQGFDQGVRAKSCL--PKMDFPRFDGSDVRIWLDMCETYFDMYQIPAMFKVSAA 274
RN QG D G A++ L P+++ P F+G D WL CE +F++ P V+ +
Sbjct: 117 RNFYVGHQG-DGGHYAEAVLKGPRLEIPLFNGDDPIDWLKQCEKFFELTGTPMDQWVNMS 175
Query: 275 VLHMSGNVAQWYQSFKLVEEICDWSQFRYAVALEFESTAQREKVQALQTLRQTG-SVADY 333
+ H G A+W++ L +I W Q+ ++ F + E V+ Q ++Q G +V Y
Sbjct: 176 LAHFQGRAAKWFRGVGLPWQIISWPQWCAMISTRFSAANVHEAVELFQNVKQYGMTVEQY 235
Query: 334 KSQFDSLVYQVRVFDPSVGGMMLLYRFILGLKEEIRSAVLVQLP 377
+F+ V VR P + + FI GL+ +I+ V Q P
Sbjct: 236 IDKFEEYVDLVRRDHPYLQEQYITSCFIGGLRSDIKHDVCGQKP 279
>Os06g0638300
Length = 695
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 64/132 (48%)
Query: 238 KMDFPRFDGSDVRIWLDMCETYFDMYQIPAMFKVSAAVLHMSGNVAQWYQSFKLVEEICD 297
K +FP F+G W+ YF + + P KV A ++++G QW S+ + E
Sbjct: 116 KFNFPEFNGEHPEAWIRKANKYFSLTKTPEEEKVLVAEVYITGKADQWIDSYDIPTETLT 175
Query: 298 WSQFRYAVALEFESTAQREKVQALQTLRQTGSVADYKSQFDSLVYQVRVFDPSVGGMMLL 357
W +F V F + ++ E + L+Q SV Y +F+ ++ V+ +P++ L
Sbjct: 176 WPEFCTMVCKRFAAKSKVEITDTFRNLKQYSSVETYIDKFEEIMPLVKRNNPNLNEEYFL 235
Query: 358 YRFILGLKEEIR 369
FI GLKE I+
Sbjct: 236 DYFISGLKEHIK 247
>Os09g0135100 Conserved hypothetical protein
Length = 404
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/103 (41%), Positives = 58/103 (56%), Gaps = 18/103 (17%)
Query: 363 GLKEEIRSAVLVQLPDTVQQAAAIALVQESVLLDSGQKPLKKLTYKGVG---AKVDTSVP 419
GLK+E+ +V QLP+ V QA +AL+ ES +KK +K G +DT
Sbjct: 148 GLKDELHYSVAAQLPENVHQAFQVALIFESA------HRMKKGVHKKEGYLTKGIDTPAK 201
Query: 420 VSEPSAIQLEGAELWKAKQLKEYRRANGLCFKCGDKYSPDHQC 462
V ++WKA+QLKEY + +GLCFKCGDKY+P H C
Sbjct: 202 VP---------GDIWKAQQLKEYHKTHGLCFKCGDKYAPRHVC 235
>Os01g0392300
Length = 519
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 84/181 (46%), Gaps = 7/181 (3%)
Query: 238 KMDFPRFDG-SDVRIWLDMCETYFDMYQIPAMFKVSAAVLHMSGNVAQWYQSFKLVEEIC 296
K++FP+FD D WL+ CE +F + A +V A H++GN +WY + +
Sbjct: 337 KLEFPKFDSKEDPLNWLNHCEQFFHGQRTDAGDRVWLATYHLTGNAQEWYFHHEQHKGPP 396
Query: 297 DWSQFRYAVALEFESTAQREKVQALQTLRQTGSVADYKSQFDSLVYQVRVFDPSVGGMML 356
DW F+ +F + + L+ L QT +VA Y+ +F +L + + L
Sbjct: 397 DWDTFKDLCYAQFGPPIRHNPLGELKRLTQTTTVAAYQCRFLALASRTAELLTENQQVQL 456
Query: 357 LYRFILGLKEEIRSAVLVQLPDTVQQAAAIALVQESVLL---DSGQKPLKKLTYKGVGAK 413
L GL+E++ V + PD +Q+A ++A E L D Q + L G G +
Sbjct: 457 L---TAGLREDLAIDVEINRPDDLQEAMSLARAFERKALKQADGTQGRSQHLRLGGCGMR 513
Query: 414 V 414
+
Sbjct: 514 I 514
>Os04g0316700
Length = 666
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 97/231 (41%), Gaps = 16/231 (6%)
Query: 237 PKMDFPRFDGSDVRIWLDMCETYFDMYQIPAMFKVSAAVLHMSGNVAQWYQSFKLVEEIC 296
P+++ P F G D WL CE ++++ PA V+ A+ H+ G +WY+ + ++
Sbjct: 232 PRLEIPLFSGEDPIDWLKQCEKFYEISGTPAEQWVNLAIAHLQGKAMKWYRGIGIPWQLI 291
Query: 297 DWSQFRYAVALEFESTAQREKVQALQTLRQTG-SVADYKSQFDSLVYQVRVFDPSVGGMM 355
W Q+ V+ F + E V+ Q ++Q +V Y +F+ V VR P +
Sbjct: 292 TWPQWCAMVSTRFSAADTHEAVELFQNVKQYNQTVEQYIDKFEEYVDLVRREHPYLQEQY 351
Query: 356 LLYRFILGLKEEIRSAVLVQLPDTVQQAAAIALVQESVLLDSGQKPLKKLTYKGVGAKVD 415
L FI GL+ +I+ V P + ++ E + +K L
Sbjct: 352 LNSCFIGGLRGDIKHDVCGHKPQGLLESYWYTKNYERAA--NARKNLLNFNRNRF----- 404
Query: 416 TSVPVSEPSAIQLEGAELWKAKQLKEY--RRANGLCFKCGDKYSPDHQCVI 464
+ A ++G + Q +E ++ C+ C + + P HQC +
Sbjct: 405 ------QNQAGPIQGRNVVNRGQPREQVEKKEERKCWFCKEPWFPKHQCKV 449
>Os04g0683300
Length = 272
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 73/155 (47%), Gaps = 1/155 (0%)
Query: 216 IRNEAESSQGFDQ-GVRAKSCLPKMDFPRFDGSDVRIWLDMCETYFDMYQIPAMFKVSAA 274
+ +E + +G +Q K K +FP F+G W+ YF + + P KV A
Sbjct: 93 VTHEQQRHRGRNQYAEEVKKGPKKFNFPEFNGEHPEAWIRKANKYFALTKTPEEEKVLVA 152
Query: 275 VLHMSGNVAQWYQSFKLVEEICDWSQFRYAVALEFESTAQREKVQALQTLRQTGSVADYK 334
++++ QW S+ + E W +F V F + ++ E + + L+Q GSV Y
Sbjct: 153 EVYITSKADQWSDSYDIPTETLSWPEFCTIVCKRFAAKSKVEIIDIFRNLKQYGSVESYI 212
Query: 335 SQFDSLVYQVRVFDPSVGGMMLLYRFILGLKEEIR 369
+F+ +V V+ + S+ L FI GLK+ I+
Sbjct: 213 DKFEEIVPLVKRNNSSLNEEYFLDYFISGLKDHIK 247
>Os03g0147100 Retrotransposon gag protein family protein
Length = 282
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 61/130 (46%)
Query: 209 FHTRPVFIRNEAESSQGFDQGVRAKSCLPKMDFPRFDGSDVRIWLDMCETYFDMYQIPAM 268
F T + + A + V + LP M P+FDG + ++W + CE YFD Y +
Sbjct: 153 FSTPAPYFHDPAMRTAFTGSAVGTSTGLPPMPCPQFDGDNPQMWRENCEAYFDTYGVSPA 212
Query: 269 FKVSAAVLHMSGNVAQWYQSFKLVEEICDWSQFRYAVALEFESTAQREKVQALQTLRQTG 328
V A L+ SGN + W QS + W + V +F ++ ++ +RQTG
Sbjct: 213 HWVRIATLNFSGNASFWLQSVRSQLIGVTWVELCEKVCAKFSRDRHQQLIRQYIHIRQTG 272
Query: 329 SVADYKSQFD 338
SV +Y +FD
Sbjct: 273 SVTEYVDKFD 282
>Os12g0264400
Length = 468
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 29/42 (69%), Positives = 35/42 (83%)
Query: 237 PKMDFPRFDGSDVRIWLDMCETYFDMYQIPAMFKVSAAVLHM 278
PKMD+P+FDG+DVR+WLD CETYF YQI FKVSAA L++
Sbjct: 157 PKMDYPKFDGTDVRVWLDNCETYFVFYQIAKGFKVSAAALNL 198
>Os10g0558300
Length = 581
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 66/142 (46%), Gaps = 1/142 (0%)
Query: 237 PKMDFPRFDGSDVRIWLDMCETYFDMYQIPAMFKVSAAVLHMSGNVAQWYQSFKLVEEIC 296
P+++ P F G + WL CE +F++ P V+ A+ H+ G +WY+ + ++
Sbjct: 240 PRLEIPLFGGEEPVDWLKQCEKFFEITGTPVDQWVNLALAHLQGRAIKWYRGIGIPWQLI 299
Query: 297 DWSQFRYAVALEFESTAQREKVQALQTLRQTGSVAD-YKSQFDSLVYQVRVFDPSVGGMM 355
W Q+ V F + E V+ Q ++Q G D Y +F+ + V+ P +
Sbjct: 300 SWPQWCAMVCTRFSAADVHEAVELFQNVKQHGQTVDQYIDKFEEYMDLVKRDHPYLQEQY 359
Query: 356 LLYRFILGLKEEIRSAVLVQLP 377
L FI GL+ +I+ V P
Sbjct: 360 LNSCFIGGLRNDIKHDVSGHKP 381
>Os04g0191000 Retrotransposon gag protein family protein
Length = 1463
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 102/245 (41%), Gaps = 32/245 (13%)
Query: 238 KMDFPRFDGS-DVRIWLDMCETYFDMYQIPAMFKVSAAVLHMSGNVAQWYQSFKLVEEIC 296
K DFPR+DG+ D ++L+ E YF ++ A +V A H+ WY E
Sbjct: 59 KWDFPRYDGTTDPLLFLNKFEAYFRHHRTMAEERVGMASYHLDDVTQTWYTQLLEDEGTP 118
Query: 297 DWSQFRYAVALEFESTAQREKVQALQTLRQTGSVADYKSQFDSLVYQVRVFDPSVGGMML 356
W +F+ V L F + + L R+TG+V +Y ++F +L+ + D S +
Sbjct: 119 TWGRFKELVNLRFGPPLRSAPLFELSECRRTGTVEEYSNRFQALLPRAGRLDESQRVQL- 177
Query: 357 LYRFILGLKEEIRSAVLVQLPDTVQQAAAIALVQESVLLDSGQKPLKKLTYKGVGAKVDT 416
F GL + AV + P+T+ AAA++L ++ L++ + L G
Sbjct: 178 ---FTGGLLPPLSHAVRIHHPETL--AAAMSLARQVELMERDRPAPPPLRAPPRGL---- 228
Query: 417 SVPVSEP----------------SAIQLEGAELWKAKQLKEYRRAN----GLCFKCGDKY 456
+P P A +G + ++L A GLCF C +K+
Sbjct: 229 -LPAPAPRLALPAPAQQLALPAPPAAAPQGRDAANPRRLTPEEMAERCRQGLCFNCNEKF 287
Query: 457 SPDHQ 461
+ H
Sbjct: 288 TRGHN 292
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.319 0.133 0.385
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 12,812,155
Number of extensions: 473405
Number of successful extensions: 1614
Number of sequences better than 1.0e-10: 38
Number of HSP's gapped: 1585
Number of HSP's successfully gapped: 40
Length of query: 466
Length of database: 17,035,801
Length adjustment: 104
Effective length of query: 362
Effective length of database: 11,605,545
Effective search space: 4201207290
Effective search space used: 4201207290
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 158 (65.5 bits)