Os09g0135100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os09g0135100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 108.91 | 0.49 | 7.17 | 0.599 | 0.368 | 0.942 | 0.45 | -1.22 | 0.3 | 7.59 | 28.8 | 1704 | -- | -- |
| 109.52 | 0.487 | 7.2 | 0.305 | 0.409 | 0.835 | 0.385 | -- | 0.218 | 7.4 | 28.89 | 1710 | -- | -- |
| 109.45 | 0.487 | 7.17 | 0.585 | 0.372 | 0.933 | -- | -1.13 | 0.292 | 7.36 | 28.9 | 1704 | -- | -- |
| 109.9 | 0.488 | 7.21 | 0.314 | 0.398 | 0.825 | -- | -- | 0.217 | 7.23 | 28.9 | 1704 | -- | -- |
| 115.82 | 0.501 | 7.17 | 0.686 | -- | 1.06 | -- | -1.42 | 0.337 | -- | 28.7 | 1803 | -- | -- |
| 135.64 | 0.546 | 7.23 | 0.0336 | 0.465 | -- | 0.423 | -- | 0.106 | 7.33 | -- | -- | -- | -- |
| 136.09 | 0.546 | 7.23 | 0.042 | 0.468 | -- | -- | -- | 0.105 | 7.14 | -- | -- | -- | -- |
| 116.59 | 0.503 | 7.21 | 0.313 | -- | 0.921 | -- | -- | 0.229 | -- | 28.86 | 1811 | -- | -- |
| 111.99 | 0.493 | 7.21 | -- | 0.403 | 0.78 | -- | -- | 0.179 | 7.19 | 28.8 | 1704 | -- | -- |
| 147.65 | 0.568 | 7.24 | 0.0508 | -- | -- | -- | -- | 0.113 | -- | -- | -- | -- | -- |
| 136.14 | 0.546 | 7.23 | -- | 0.468 | -- | -- | -- | 0.1 | 7.13 | -- | -- | -- | -- |
| 119.03 | 0.508 | 7.22 | -- | -- | 0.863 | -- | -- | 0.188 | -- | 28.82 | 1823 | -- | -- |
| 147.72 | 0.567 | 7.24 | -- | -- | -- | -- | -- | 0.108 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 106.80 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 12 | 1 |
| 2 | 107.26 | humidity | 70.0 | 43200 | > th | dose dependent | rect. | 1 | 18 |
| 4 | 107.41 | humidity | 70.0 | 43200 | > th | dose dependent | rect. | 9 | 17 |
| 15 | 107.75 | humidity | 70.0 | 43200 | > th | dose dependent | sin | 18 | NA |
| 23 | 107.89 | humidity | 70.0 | 43200 | > th | dose dependent | rect. | 2 | 14 |
| 32 | 108.19 | humidity | 70.0 | 43200 | > th | dose dependent | sin | 3 | NA |
| 39 | 108.45 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 21 | 1 |
| 44 | 108.50 | humidity | 70.0 | 43200 | > th | dose dependent | rect. | 5 | 20 |
| 59 | 108.67 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 4 | 11 |
| 62 | 108.70 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 3 | 14 |
| 63 | 108.71 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 18 | 2 |
| 65 | 108.72 | humidity | 80.0 | 43200 | > th | dose independent | sin | 2 | NA |
| 68 | 108.74 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 20 | 3 |
| 77 | 108.91 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 12 | 1 |
| 80 | 108.94 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 17 | 12 |
| 89 | 109.01 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 5 | 8 |
| 96 | 109.04 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 105 | 109.09 | temperature | 30.0 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 106 | 109.09 | radiation | 10.0 | 43200 | > th | dose independent | rect. | 10 | 1 |
| 113 | 109.10 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 13 | 17 |
| 121 | 109.13 | temperature | 25.0 | 14400 | > th | dose dependent | sin | 14 | NA |
| 126 | 109.14 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 17 | 8 |
| 136 | 109.15 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 13 | 8 |
| 141 | 109.16 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 15 | 10 |
| 145 | 109.16 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 13 | 10 |
| 150 | 109.17 | wind | 3.0 | 43200 | < th | dose independent | rect. | 2 | 2 |
| 152 | 109.17 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 15 | 8 |
| 169 | 109.18 | temperature | 30.0 | 14400 | < th | dose independent | sin | 14 | NA |
| 184 | 109.19 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 15 | 4 |
| 199 | 109.20 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 17 | 15 |
| 200 | 109.20 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 2 | 16 |
| 215 | 109.22 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 7 | 1 |
| 216 | 109.22 | temperature | 30.0 | 14400 | > th | dose independent | rect. | 15 | 3 |
| 250 | 109.25 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 13 | 1 |
| 265 | 109.27 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 1 | 10 |
| 267 | 109.27 | humidity | 80.0 | 43200 | > th | dose dependent | sin | 15 | NA |
| 268 | 109.27 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 9 | 4 |
| 314 | 109.30 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 1 | 12 |
| 326 | 109.30 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 12 | 21 |
| 327 | 109.31 | temperature | 30.0 | 14400 | > th | dose independent | sin | 14 | NA |
| 376 | 109.33 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 14 | 13 |
| 399 | 109.36 | wind | 7.0 | 43200 | > th | dose independent | rect. | 5 | 8 |
| 417 | 109.37 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 16 | 22 |
| 458 | 109.40 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 22 | 23 |
| 459 | 109.41 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 475 | 109.41 | temperature | 25.0 | 14400 | > th | dose dependent | no | NA | NA |
| 477 | 109.41 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 1 | 20 |
| 490 | 109.42 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 491 | 109.42 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 18 | 1 |
| 493 | 109.42 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 3 | 14 |
| 578 | 109.46 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 19 | 23 |
| 597 | 109.48 | wind | 3.0 | 43200 | > th | dose independent | rect. | 3 | 1 |
| 602 | 109.49 | humidity | 80.0 | 43200 | < th | dose independent | sin | 2 | NA |
| 603 | 109.49 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 3 | 8 |
| 636 | 109.52 | temperature | 25.0 | 14400 | > th | dose independent | sin | 6 | NA |
| 662 | 109.54 | wind | 7.0 | 43200 | > th | dose independent | rect. | 10 | 2 |
| 664 | 109.54 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 1 | 12 |
| 682 | 109.56 | wind | 3.0 | 43200 | > th | dose independent | rect. | 2 | 3 |
| 719 | 109.59 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 4 | 5 |
| 722 | 109.59 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 19 | 19 |
| 723 | 109.59 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 2 | 19 |
| 742 | 109.61 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 4 | 12 |
| 747 | 109.62 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 2 | 7 |
| 757 | 109.63 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 19 | 2 |
| 764 | 109.63 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 19 | 2 |
| 771 | 109.64 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 14 | 1 |
| 777 | 109.64 | wind | 3.0 | 43200 | > th | dose dependent | rect. | 5 | 2 |
| 834 | 109.70 | wind | 7.0 | 43200 | < th | dose independent | rect. | 11 | 1 |
| 837 | 109.70 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 17 | 21 |
| 878 | 109.73 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 10 | 1 |
| 890 | 109.74 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 19 | 2 |
| 910 | 109.75 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 20 | 20 |
| 922 | 109.77 | temperature | 25.0 | 14400 | < th | dose independent | sin | 5 | NA |
| 934 | 109.78 | wind | 9.0 | 43200 | > th | dose independent | rect. | 19 | 17 |
| 949 | 109.79 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 23 | 15 |
| 967 | 109.81 | wind | 7.0 | 43200 | < th | dose independent | rect. | 5 | 8 |