Os03g0827200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description :
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Os03g0827200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description :
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 352.37 | 0.874 | 4.31 | 2.48 | 0.141 | -142 | -0.391 | -296 | -0.144 | 11.7 | 15 | 90 | -- | -- |
| 352.88 | 0.882 | 3.09 | -0.053 | 0.132 | -1.97 | -0.326 | -- | -0.138 | 11.7 | 15 | 90 | -- | -- |
| 353.03 | 0.875 | 4.32 | 2.47 | 0.143 | -142 | -- | -296 | -0.145 | 11.9 | 15 | 91 | -- | -- |
| 353.32 | 0.881 | 3.09 | -0.0692 | 0.132 | -1.88 | -- | -- | -0.14 | 11.9 | 15 | 91 | -- | -- |
| 354.31 | 0.877 | 4.32 | 2.46 | -- | -142 | -- | -296 | -0.149 | -- | 15.05 | 91 | -- | -- |
| 360.11 | 0.89 | 3.1 | -0.138 | 0.0993 | -- | -0.0945 | -- | -0.158 | 11.7 | -- | -- | -- | -- |
| 360.15 | 0.889 | 3.1 | -0.141 | 0.0997 | -- | -- | -- | -0.159 | 11.8 | -- | -- | -- | -- |
| 354.4 | 0.881 | 3.1 | -0.0759 | -- | -1.81 | -- | -- | -0.142 | -- | 14.42 | 107 | -- | -- |
| 353.44 | 0.88 | 3.09 | -- | 0.133 | -1.92 | -- | -- | -0.132 | 11.9 | 14.59 | 134 | -- | -- |
| 360.78 | 0.888 | 3.1 | -0.144 | -- | -- | -- | -- | -0.16 | -- | -- | -- | -- | -- |
| 360.68 | 0.888 | 3.09 | -- | 0.102 | -- | -- | -- | -0.143 | 11.9 | -- | -- | -- | -- |
| 354.55 | 0.88 | 3.09 | -- | -- | -1.85 | -- | -- | -0.134 | -- | 14.42 | 107 | -- | -- |
| 361.33 | 0.887 | 3.1 | -- | -- | -- | -- | -- | -0.144 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 339.86 | wind | 5.0 | 90 | > th | dose dependent | rect. | 3 | 5 |
| 2 | 340.04 | wind | 9.0 | 90 | > th | dose independent | rect. | 13 | 2 |
| 3 | 340.05 | wind | 9.0 | 90 | > th | dose dependent | rect. | 13 | 2 |
| 6 | 340.11 | wind | 5.0 | 90 | > th | dose independent | rect. | 3 | 5 |
| 7 | 340.15 | temperature | 25.0 | 10 | > th | dose dependent | rect. | 9 | 1 |
| 9 | 340.16 | atmosphere | 1010.0 | 30 | < th | dose dependent | rect. | 9 | 1 |
| 10 | 340.18 | wind | 9.0 | 10 | > th | dose independent | rect. | 13 | 1 |
| 22 | 340.18 | wind | 9.0 | 10 | > th | dose dependent | rect. | 13 | 1 |
| 41 | 340.81 | humidity | 50.0 | 10 | < th | dose independent | rect. | 15 | 2 |
| 48 | 341.31 | humidity | 50.0 | 10 | < th | dose dependent | rect. | 15 | 2 |
| 49 | 341.44 | wind | 5.0 | 90 | > th | dose independent | rect. | 5 | 3 |
| 53 | 341.54 | wind | 5.0 | 90 | > th | dose independent | rect. | 7 | 1 |
| 60 | 341.72 | wind | 5.0 | 90 | > th | dose dependent | rect. | 7 | 1 |
| 94 | 342.54 | radiation | 20.0 | 90 | > th | dose independent | rect. | 6 | 1 |
| 108 | 342.54 | radiation | 20.0 | 90 | > th | dose dependent | rect. | 6 | 1 |
| 122 | 342.56 | humidity | 70.0 | 10 | < th | dose dependent | rect. | 16 | 1 |
| 123 | 342.58 | wind | 5.0 | 10 | > th | dose independent | rect. | 7 | 1 |
| 128 | 342.66 | wind | 1.0 | 90 | < th | dose independent | rect. | 8 | 2 |
| 131 | 343.45 | radiation | 30.0 | 10 | > th | dose independent | rect. | 13 | 1 |
| 137 | 343.69 | radiation | 10.0 | 10 | > th | dose independent | rect. | 16 | 1 |
| 147 | 344.21 | temperature | 15.0 | 30 | > th | dose independent | rect. | 10 | 23 |
| 150 | 344.28 | humidity | 50.0 | 90 | < th | dose independent | rect. | 13 | 2 |
| 157 | 344.42 | atmosphere | 1005.0 | 10 | < th | dose independent | rect. | 16 | 1 |
| 165 | 344.54 | atmosphere | 1000.0 | 90 | < th | dose independent | rect. | 12 | 1 |
| 170 | 344.62 | wind | 5.0 | 10 | < th | dose independent | rect. | 16 | 1 |
| 171 | 344.63 | atmosphere | 1000.0 | 90 | < th | dose dependent | rect. | 12 | 1 |
| 174 | 344.66 | temperature | 30.0 | 10 | > th | dose dependent | rect. | 16 | 1 |
| 184 | 344.80 | atmosphere | 1005.0 | 90 | < th | dose independent | rect. | 8 | 1 |
| 193 | 345.08 | temperature | 30.0 | 10 | > th | dose independent | rect. | 16 | 1 |
| 209 | 345.78 | wind | 5.0 | 10 | < th | dose dependent | rect. | 16 | 1 |
| 222 | 346.27 | wind | 1.0 | 90 | < th | dose dependent | rect. | 8 | 2 |
| 225 | 346.31 | humidity | 70.0 | 90 | > th | dose independent | rect. | 9 | 2 |
| 238 | 346.68 | temperature | 15.0 | 90 | > th | dose independent | rect. | 21 | 11 |
| 242 | 346.71 | radiation | 1.0 | 10 | > th | dose dependent | rect. | 16 | 1 |
| 247 | 346.80 | radiation | 20.0 | 90 | < th | dose independent | rect. | 9 | 1 |
| 256 | 346.91 | temperature | 25.0 | 10 | > th | dose independent | rect. | 9 | 1 |
| 317 | 347.61 | temperature | 15.0 | 10 | > th | dose independent | rect. | 21 | 12 |
| 319 | 347.66 | radiation | 20.0 | 10 | > th | dose dependent | rect. | 13 | 1 |
| 323 | 347.73 | temperature | 15.0 | 720 | > th | dose independent | rect. | 21 | 1 |
| 352 | 348.30 | radiation | 30.0 | 10 | < th | dose independent | rect. | 9 | 1 |
| 371 | 348.69 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 1 | 1 |
| 376 | 348.75 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 23 | 5 |
| 382 | 348.85 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 2 | 1 |
| 393 | 348.97 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 22 | 6 |
| 397 | 348.98 | humidity | 50.0 | 30 | > th | dose independent | rect. | 10 | 23 |
| 401 | 348.99 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 20 | 10 |
| 406 | 349.02 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 2 | 1 |
| 408 | 349.08 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 11 | 3 |
| 410 | 349.08 | temperature | 30.0 | 90 | > th | dose dependent | rect. | 13 | 1 |
| 411 | 349.08 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 11 | 3 |
| 418 | 349.16 | temperature | 15.0 | 10 | > th | dose independent | rect. | 3 | 23 |
| 420 | 349.17 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 23 | 4 |
| 439 | 349.27 | wind | 1.0 | 90 | < th | dose independent | rect. | 15 | 1 |
| 444 | 349.29 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 9 | 1 |
| 446 | 349.31 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 12 | 1 |
| 448 | 349.31 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 12 | 1 |
| 453 | 349.33 | wind | 7.0 | 10 | < th | dose independent | rect. | 9 | 1 |
| 456 | 349.33 | wind | 1.0 | 30 | < th | dose dependent | rect. | 15 | 1 |
| 465 | 349.36 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 20 | 9 |
| 485 | 349.51 | humidity | 80.0 | 90 | < th | dose dependent | rect. | 6 | 2 |
| 499 | 349.61 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 10 | 23 |
| 504 | 349.64 | wind | 1.0 | 10 | > th | dose independent | rect. | 9 | 1 |
| 509 | 349.66 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 9 | 1 |
| 534 | 349.75 | wind | 7.0 | 30 | < th | dose dependent | rect. | 9 | 1 |
| 544 | 349.81 | atmosphere | 1010.0 | 10 | < th | dose dependent | rect. | 16 | 1 |
| 584 | 349.96 | temperature | 30.0 | 30 | > th | dose independent | rect. | 13 | 4 |
| 652 | 350.10 | temperature | 30.0 | 90 | < th | dose independent | rect. | 8 | 13 |
| 660 | 350.14 | wind | 1.0 | 90 | < th | dose independent | rect. | 8 | 8 |
| 664 | 350.15 | wind | 1.0 | 90 | < th | dose independent | rect. | 8 | 15 |
| 665 | 350.15 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 8 | 1 |
| 667 | 350.16 | temperature | 30.0 | 90 | < th | dose independent | rect. | 7 | 23 |
| 677 | 350.19 | temperature | 15.0 | 30 | > th | dose independent | rect. | 14 | 19 |
| 689 | 350.24 | humidity | 80.0 | 90 | < th | dose independent | rect. | 6 | 1 |
| 707 | 350.33 | temperature | 25.0 | 4320 | > th | dose independent | sin | 12 | NA |
| 715 | 350.39 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 11 | 8 |
| 718 | 350.39 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 11 | 8 |
| 722 | 350.41 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 15 | 2 |
| 744 | 350.48 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 9 | 1 |
| 761 | 350.53 | temperature | 30.0 | 90 | < th | dose independent | rect. | 8 | 11 |
| 778 | 350.54 | humidity | 90.0 | 30 | < th | dose independent | rect. | 9 | 1 |
| 783 | 350.56 | temperature | 25.0 | 4320 | < th | dose independent | sin | 12 | NA |
| 790 | 350.59 | temperature | 30.0 | 30 | < th | dose independent | rect. | 9 | 1 |
| 791 | 350.59 | temperature | 15.0 | 720 | > th | dose independent | rect. | 12 | 10 |
| 792 | 350.60 | temperature | 20.0 | 90 | < th | dose independent | rect. | 6 | 1 |
| 795 | 350.60 | wind | 1.0 | 30 | > th | dose independent | rect. | 10 | 23 |
| 806 | 350.62 | precipitation | 0.1 | 720 | > th | dose dependent | rect. | 12 | 6 |
| 851 | 350.74 | wind | 9.0 | 720 | < th | dose dependent | rect. | 8 | 2 |
| 854 | 350.75 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 10 | 1 |
| 857 | 350.75 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 10 | 1 |
| 863 | 350.75 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 11 | 23 |
| 877 | 350.81 | temperature | 10.0 | 30 | > th | dose independent | rect. | 9 | 1 |
| 882 | 350.81 | radiation | 1.0 | 30 | > th | dose independent | rect. | 9 | 1 |
| 883 | 350.81 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 9 | 1 |
| 887 | 350.81 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 9 | 1 |
| 904 | 350.85 | atmosphere | 1000.0 | 90 | < th | dose dependent | rect. | 22 | 1 |
| 919 | 350.89 | radiation | 20.0 | 90 | < th | dose dependent | rect. | 8 | 4 |
| 958 | 350.94 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 10 | 23 |
| 960 | 350.94 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 10 | 23 |