BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0827200 Os03g0827200|Os03g0827200
(437 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os03g0827200 745 0.0
Os12g0428300 Retrotransposon gag protein family protein 462 e-130
Os01g0341500 324 1e-88
Os04g0192400 308 7e-84
Os05g0374700 213 2e-55
Os10g0520550 211 8e-55
Os07g0195900 179 3e-45
Os02g0519400 157 2e-38
Os06g0527166 152 3e-37
Os08g0285400 147 1e-35
Os09g0387900 145 7e-35
Os09g0135100 Conserved hypothetical protein 142 3e-34
Os06g0570000 129 6e-30
Os03g0377450 122 5e-28
Os08g0451600 Peptidase aspartic, catalytic domain containin... 114 1e-25
AK106323 111 1e-24
Os05g0276900 109 3e-24
Os12g0264400 107 1e-23
Os02g0522000 Retrotransposon gag protein family protein 95 9e-20
Os12g0271900 92 7e-19
Os03g0156800 Cyclin-like F-box domain containing protein 89 4e-18
Os03g0300700 Retrotransposon gag protein family protein 82 1e-15
Os04g0666200 79 6e-15
Os01g0392300 79 9e-15
Os01g0204400 73 5e-13
Os10g0317000 Retrotransposon gag protein family protein 72 6e-13
Os12g0450264 69 8e-12
Os06g0638300 66 6e-11
>Os03g0827200
Length = 437
Score = 745 bits (1924), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 367/418 (87%), Positives = 367/418 (87%)
Query: 20 NTIEDIGKRLHLIDNKLAQQGERLDRVQTKVDLSMTSLGQVQQEQTMLXXXXXXXXXXXP 79
NTIEDIGKRLHLIDNKLAQQGERLDRVQTKVDLSMTSLGQVQQEQTML P
Sbjct: 20 NTIEDIGKRLHLIDNKLAQQGERLDRVQTKVDLSMTSLGQVQQEQTMLARALKATAAAAP 79
Query: 80 ESSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHGDSPREQVSRVPVTTSAPEVGEFAPRR 139
ESS HGDSPREQVSRVPVTTSAPEVGEFAPRR
Sbjct: 80 ESSLPTPPQRPPPLLPTPTATSGASTSATPPPHGDSPREQVSRVPVTTSAPEVGEFAPRR 139
Query: 140 QWSPKMDFPKFSGSDVRVWLDNCETFFLFYQIADGYKVSAAVLNMSGDAANWYQEWKFEQ 199
QWSPKMDFPKFSGSDVRVWLDNCETFFLFYQIADGYKVSAAVLNMSGDAANWYQEWKFEQ
Sbjct: 140 QWSPKMDFPKFSGSDVRVWLDNCETFFLFYQIADGYKVSAAVLNMSGDAANWYQEWKFEQ 199
Query: 200 GWHDWPMLKAALLGEFEVHLKYVKMDELLLLTQTGFVSDYRSKFNQLVYQIRLYDPLLSP 259
GWHDWPMLKAALLGEFEVHLKYVKMDELLLLTQTGFVSDYRSKFNQLVYQIRLYDPLLSP
Sbjct: 200 GWHDWPMLKAALLGEFEVHLKYVKMDELLLLTQTGFVSDYRSKFNQLVYQIRLYDPLLSP 259
Query: 260 NFLIRQFLLGLKDELRVPVQAQQPTSVTQAFLVALAYESALPXXXXXXXXXXXNFQVGRG 319
NFLIRQFLLGLKDELRVPVQAQQPTSVTQAFLVALAYESALP NFQVGRG
Sbjct: 260 NFLIRQFLLGLKDELRVPVQAQQPTSVTQAFLVALAYESALPSSGSKKSVSKKNFQVGRG 319
Query: 320 GEKQKLAPGELWKAQQLKEYRRAQGLCFKCGDKYIPGHVCSKQETPQLKAMELQEEAIVL 379
GEKQKLAPGELWKAQQLKEYRRAQGLCFKCGDKYIPGHVCSKQETPQLKAMELQEEAIVL
Sbjct: 320 GEKQKLAPGELWKAQQLKEYRRAQGLCFKCGDKYIPGHVCSKQETPQLKAMELQEEAIVL 379
Query: 380 TDELLDAVTGLELSEDSANLSLHALAGTSHTNIVQLRALSSNQECRTIKRDDALTYEE 437
TDELLDAVTGLELSEDSANLSLHALAGTSHTNIVQLRALSSNQECRTIKRDDALTYEE
Sbjct: 380 TDELLDAVTGLELSEDSANLSLHALAGTSHTNIVQLRALSSNQECRTIKRDDALTYEE 437
>Os12g0428300 Retrotransposon gag protein family protein
Length = 545
Score = 462 bits (1189), Expect = e-130, Method: Compositional matrix adjust.
Identities = 242/407 (59%), Positives = 281/407 (69%), Gaps = 6/407 (1%)
Query: 22 IEDIGKRLHLIDNKLAQQGERLDRVQTKVDLSMTSLGQVQQEQTMLXXXXXXXXXXXPES 81
IE I K L ID KL GERLDRVQ K+DLSMTSLGQVQQEQ+ + +
Sbjct: 22 IEVITKHLEEIDAKLVSHGERLDRVQAKMDLSMTSLGQVQQEQSQVARVLKAAAAAPSSA 81
Query: 82 SXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHGDSPREQVSRVP------VTTSAPEVGEF 135
+ P R P + SA E G+
Sbjct: 82 APSTPHGQPPLLETPRGASSATTSLTPPPPPPPPPPPPFGRRPPQVSSSPSLSASEGGDS 141
Query: 136 APRRQWSPKMDFPKFSGSDVRVWLDNCETFFLFYQIADGYKVSAAVLNMSGDAANWYQEW 195
APRRQW+PKMDFP+F G+DVRVWLDNCET+F FYQI +G++VSAA LNM GDAANWYQ W
Sbjct: 142 APRRQWTPKMDFPRFDGTDVRVWLDNCETYFGFYQITEGFQVSAASLNMIGDAANWYQAW 201
Query: 196 KFEQGWHDWPMLKAALLGEFEVHLKYVKMDELLLLTQTGFVSDYRSKFNQLVYQIRLYDP 255
K E GWH+W LK A+L EFEV+L+ VKMDELLLLTQTG V++YRSKFNQLVYQ+RLYDP
Sbjct: 202 KLETGWHNWESLKTAVLNEFEVNLESVKMDELLLLTQTGSVTEYRSKFNQLVYQLRLYDP 261
Query: 256 LLSPNFLIRQFLLGLKDELRVPVQAQQPTSVTQAFLVALAYESALPXXXXXXXXXXXNFQ 315
LLS FLIR FLLGLKDELR VQAQQPTSV+QA+LVALA+ESA
Sbjct: 262 LLSDTFLIRHFLLGLKDELRSAVQAQQPTSVSQAYLVALAHESAQLGTGTKKGHYKKEHV 321
Query: 316 VGRGGEKQKLAPGELWKAQQLKEYRRAQGLCFKCGDKYIPGHVCSKQETPQLKAMELQEE 375
RG +K KLAPGELWKAQQLKEYRRAQGLCFKCG+KY PGHVC+KQE QLKA+ +QEE
Sbjct: 322 AIRGTDKLKLAPGELWKAQQLKEYRRAQGLCFKCGEKYAPGHVCAKQEGVQLKALHVQEE 381
Query: 376 AIVLTDELLDAVTGLELSEDSANLSLHALAGTSHTNIVQLRALSSNQ 422
+ VL+DE+LDA+T L++S DS +LSLHA+AGT ++ VQLRAL NQ
Sbjct: 382 SEVLSDEVLDAITALDVSSDSISLSLHAMAGTCPSHTVQLRALVQNQ 428
>Os01g0341500
Length = 420
Score = 324 bits (830), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 173/347 (49%), Positives = 213/347 (61%), Gaps = 23/347 (6%)
Query: 20 NTIEDIGKRLHLIDNKLAQQGERLDRVQTKVDLSMTSLGQVQQEQTMLXXXXXXXXXXXP 79
+ ++ +G++L ID+KL +QG RLD VQ+KVDLSM SLGQVQ EQ ++ P
Sbjct: 20 DKVDALGQQLTQIDSKLEKQGARLDAVQSKVDLSMASLGQVQCEQALMTKALKAAAT--P 77
Query: 80 ESSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHGDSPREQVSRVPVTTSAPEV---GEFA 136
S P +V VPV + P V +
Sbjct: 78 SSPLLPTPRPTLSQDAASTST--------------QPPPEV-EVPVRSGQPPVRDNSDVQ 122
Query: 137 PRRQWSPKMDFPKFSGSDVRVWLDNCETFFLFYQIADGYKVSAAVLNMSGDAANWYQEWK 196
RR W PKMDFPKF G+DV VW+DNCET+F YQI +G+KVSAA LNM GDAA+WYQ WK
Sbjct: 123 GRRSWVPKMDFPKFDGTDVCVWVDNCETYFALYQITEGFKVSAASLNMIGDAAHWYQAWK 182
Query: 197 FEQGWHDWPMLKAALLGEFEVHLKYVKMDELLLLTQTGFVSDYRSKFNQLVYQIRLYDPL 256
E+GW W L+ A+L EFE+++K KM+ELLLLTQTG VS+YRSKF QLVY IRLYDP
Sbjct: 183 QERGWPTWEQLREAVLNEFEINIKRAKMEELLLLTQTGTVSEYRSKFLQLVYHIRLYDPA 242
Query: 257 LSPNFLIRQFLLGLKDELRVPVQAQQPTSVTQAFLVALAYESALPXXXXXXXXXXXNFQV 316
S FL+ +F++GLKDELR V AQ+P +V QA VALA+E A N +
Sbjct: 243 TSGLFLVSRFVMGLKDELRCFVAAQEPETVHQAARVALAFEGAFCNRKVAFKKDVGNVKF 302
Query: 317 GRGGEKQKLAPGELWKAQQLKEYRRAQGLCFKCGDKYIPGHVCSKQE 363
G+K K+ G+LWKAQQLKEYRR GLCFKCG+KY P H C K E
Sbjct: 303 ---GDKGKVPVGDLWKAQQLKEYRRTHGLCFKCGEKYSPAHTCGKTE 346
>Os04g0192400
Length = 637
Score = 308 bits (788), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 147/226 (65%), Positives = 170/226 (75%)
Query: 138 RRQWSPKMDFPKFSGSDVRVWLDNCETFFLFYQIADGYKVSAAVLNMSGDAANWYQEWKF 197
R++W+PKMDFPKF G+ V+VW+DNCET+F FYQI + + VSA +N+ GDAANWYQ WK
Sbjct: 401 RQRWTPKMDFPKFDGNGVKVWIDNCETYFAFYQITEAFLVSATSMNLMGDAANWYQTWKL 460
Query: 198 EQGWHDWPMLKAALLGEFEVHLKYVKMDELLLLTQTGFVSDYRSKFNQLVYQIRLYDPLL 257
E GWHDW MLK A+ EF+VHL VKMDELLLL QT V +Y SKF++LVYQIRLYDPLL
Sbjct: 461 EVGWHDWEMLKTAISREFDVHLWSVKMDELLLLKQTSTVIEYCSKFSELVYQIRLYDPLL 520
Query: 258 SPNFLIRQFLLGLKDELRVPVQAQQPTSVTQAFLVALAYESALPXXXXXXXXXXXNFQVG 317
+ L+ F+LGLKD+LR VQA QPT+VTQ LVALA E A + VG
Sbjct: 521 CGSVLVSHFMLGLKDDLRSFVQAAQPTTVTQDCLVALAQEGAHIGQPRKRFNQCRDNAVG 580
Query: 318 RGGEKQKLAPGELWKAQQLKEYRRAQGLCFKCGDKYIPGHVCSKQE 363
RG EK KLA GELWKAQQLKEYRRAQGLCFKCGDKY+ G VC KQE
Sbjct: 581 RGNEKPKLARGELWKAQQLKEYRRAQGLCFKCGDKYVSGQVCVKQE 626
>Os05g0374700
Length = 466
Score = 213 bits (543), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 109/226 (48%), Positives = 139/226 (61%), Gaps = 9/226 (3%)
Query: 143 PKMDFPKFSGSDVRVWLDNCETFFLFYQIADGYKVSAAVLNMSGDAANWYQEWKFEQGWH 202
PKMDFP+F GSDVR+WLD CET+F YQI +KVSAAVL+MSG+ A WYQ +K +
Sbjct: 237 PKMDFPRFDGSDVRIWLDMCETYFDMYQIPAMFKVSAAVLHMSGNVAQWYQSFKLVEEIC 296
Query: 203 DWPMLKAALLGEFEVHLKYVKMDELLLLTQTGFVSDYRSKFNQLVYQIRLYDPLLSPNFL 262
DW + A+ EFE + K+ L L QTG V+DY+S+F+ LVYQ+R++DP + L
Sbjct: 297 DWSQFRYAVALEFESTAQREKVQALQTLRQTGSVADYKSQFDSLVYQVRVFDPSVGGMML 356
Query: 263 IRQFLLGLKDELRVPVQAQQPTSVTQAFLVALAYESALPXXXXXXXXXXXNFQVGRGGEK 322
+ +F+LGLK+E+R V Q P +V QA +AL ES L VG +
Sbjct: 357 LYRFILGLKEEIRSAVLVQLPDTVQQAAAIALVQESVLLDSGQKPLKKLTYKGVGAKVDT 416
Query: 323 Q---------KLAPGELWKAQQLKEYRRAQGLCFKCGDKYIPGHVC 359
+L ELWKA+QLKEYRRA GLCFKCGDKY P H C
Sbjct: 417 SVPVSEPSAIQLEGAELWKAKQLKEYRRANGLCFKCGDKYSPDHQC 462
>Os10g0520550
Length = 364
Score = 211 bits (537), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 108/240 (45%), Positives = 145/240 (60%), Gaps = 8/240 (3%)
Query: 138 RRQWSPKMDFPKFSGSDVRVWLDNCETFFLFYQIADGYKVSAAVLNMSGDAANWYQEWKF 197
R Q PKMDFP+F GSDVR+WL+ CET+F YQI +KVSA VL+MSG+AA WY +K
Sbjct: 115 RHQPLPKMDFPRFDGSDVRIWLNMCETYFDMYQITQNFKVSAVVLHMSGNAAQWYHSYKL 174
Query: 198 EQGWHDWPMLKAALLGEFEVHLKYVKMDELLLLTQTGFVSDYRSKFNQLVYQIRLYDPLL 257
+ W + A+ EFE ++ KM L LTQTG V++Y+ +F+ LVYQIR++DP +
Sbjct: 175 VNEVNSWDQFRMAVATEFEGVVEREKMSALDTLTQTGTVTEYKQQFDYLVYQIRVFDPSV 234
Query: 258 SPNFLIRQFLLGLKDELRVPVQAQQPTSVTQAFLVALAYESALPXXXXXXXXXX------ 311
L+ +F+ GL +E+R V Q P +V Q+ +AL ES L
Sbjct: 235 GGKMLVTRFMNGLTEEIRAAVVVQLPDTVQQSSAIALMQESVLASRATKALKGKFVKLPQ 294
Query: 312 XNFQVGRGGEKQKLAPGELWKAQQLKEYRRAQGLCFKCGDKYIPGHVCSKQETPQLKAME 371
V ++ G+LWKA+QLK+YRRAQGLCFKCGDKY P H C+ Q+KAM+
Sbjct: 295 YKSDVSSDTTPGQVDKGDLWKAKQLKDYRRAQGLCFKCGDKYTPEHRCAV--GGQIKAMQ 352
>Os07g0195900
Length = 527
Score = 179 bits (454), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 98/183 (53%), Positives = 122/183 (66%), Gaps = 5/183 (2%)
Query: 242 KFNQLVYQIRLYDPLLS-PNFLIRQFLLGLKDELRVPVQAQQPTSVTQAFLVALAYESAL 300
+FNQLVY IRLY+P ++ + L+ QF+ GLK+ELR V AQQP VTQA++ ALA+E A
Sbjct: 126 QFNQLVYHIRLYNPAITQGSVLVSQFIRGLKEELRYNVHAQQPVIVTQAYMAALAFEGA- 184
Query: 301 PXXXXXXXXXXXNFQVGRGGEKQKLAPGELWKAQQLKEYRRAQGLCFKCGDKYIPGHVCS 360
+ VG+ G+K K ELWKAQQLK+YRRA GLCFKCG+KY P HVC
Sbjct: 185 --QQLNKSFVKKDTGVGKFGDKGKSTLRELWKAQQLKDYRRANGLCFKCGEKYSPTHVCG 242
Query: 361 KQETPQLKAMELQEEAIVLTDELLDAVTGLEL-SEDSANLSLHALAGTSHTNIVQLRALS 419
K E QLKAMEL + +L D +LDA+T L+ +D LS+ ALAGTS N +QLRAL
Sbjct: 243 KVEGVQLKAMELTDTTEILDDSVLDALTNLDTPPDDGMLLSVQALAGTSSANSLQLRALV 302
Query: 420 SNQ 422
NQ
Sbjct: 303 GNQ 305
>Os02g0519400
Length = 312
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 92/241 (38%), Positives = 132/241 (54%), Gaps = 35/241 (14%)
Query: 170 QIADGYKVSAAVLNMSGDAANWYQEWKFEQGWHDWPMLKAALLGEFEVHLKYVKMDELLL 229
QI G+KVSAA LN+ G AA+WY+ W+ G H W + + A++ EF+ ++K + +
Sbjct: 67 QIPAGFKVSAASLNLVGKAAHWYKAWRQRVGLHGWELFRDAVVREFDFGTHHIKANAMFE 126
Query: 230 LTQTGFVSDYRSKFNQLVYQIRLYDPLLSPNFLIRQFLLGLKDELRVPVQAQQPTSVTQA 289
L QTG V +Y+S+F+ L+Y ++LYD + EL +A+ SV
Sbjct: 127 LKQTGTVDEYKSQFDDLLYNVKLYD----------------RTELGEVWEAKANESVM-- 168
Query: 290 FLVALAYESALPXXXXXXXXXXXNFQVGR--GGEKQKLAPGELWKAQQLKEYRRAQGLCF 347
F+ GR GGEK K + GELWKAQQLKEYRR GLCF
Sbjct: 169 -------------GEVAEGKKKWGFRTGRSKGGEKPKFSTGELWKAQQLKEYRRIHGLCF 215
Query: 348 KCGDKYIPGHVCSKQETPQLKAMELQEEAIVLTDELLDAVTGLE-LSED-SANLSLHALA 405
KCG+KY P H C++ Q+ +E + +L+DE+L+AV +E + +D LSL+ALA
Sbjct: 216 KCGEKYSPNHQCAQLPAAQVNVVETIDHKALLSDEMLEAVMDVEDIGQDPDMFLSLNALA 275
Query: 406 G 406
G
Sbjct: 276 G 276
>Os06g0527166
Length = 303
Score = 152 bits (385), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 86/216 (39%), Positives = 120/216 (55%), Gaps = 7/216 (3%)
Query: 139 RQWSPKMDFPKFSGSDVRVWLDNCETFFLFYQIADGYKVSAAVLNMSGDAANWYQEWKFE 198
+ + PKMDF +F G DV +W+D CET+F YQI+ + VSA +L+M G+AA WYQ K
Sbjct: 87 KSYLPKMDFLRFEGPDVHIWIDMCETYFKMYQISATFWVSATILHMYGNAAQWYQSVKLV 146
Query: 199 QGWHDWPMLKAALLGEFEVHLKYVKMDELLLLTQTGFVSDYRSKFNQLVYQIRLYDPLLS 258
+ DW + ++ EFE + K L LLTQTG V++Y+ + + LVYQ+RL+DP +
Sbjct: 147 EDVSDWAHFRYVVIHEFEGNTHREKTLALRLLTQTGTVAEYKQQIDSLVYQVRLFDPSVG 206
Query: 259 PNFLIRQFLLGLKDELRVPVQAQQPTSVTQAFLVALAYESALPXXXXXXXXXXXNFQVGR 318
L+ +F+LGLK E+R V Q ++ QA VAL E L V +
Sbjct: 207 GMMLVSRFVLGLKQEVRNAVLLQLSQTIQQATAVALTQEGLLLDSSPSMKRLPAKKFVPK 266
Query: 319 -----GGEKQKLAP--GELWKAQQLKEYRRAQGLCF 347
G E L P E WKA QL ++R+ GLCF
Sbjct: 267 VERLVGTETLGLKPEQAEPWKAWQLSDFRKDNGLCF 302
>Os08g0285400
Length = 326
Score = 147 bits (371), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 78/218 (35%), Positives = 128/218 (58%), Gaps = 7/218 (3%)
Query: 201 WHDWPMLKAALLGEFEVHLKYVKMDELLLLTQTGFVSDYRSKFNQLVYQIRLYDPL-LSP 259
++D A++ EF+ ++K + + L QTG V +Y+S+F+ L+Y I+LYD L
Sbjct: 68 FYDKRTTSDAVVNEFDSGTHHIKANAMFELKQTGSVDEYKSQFDDLMYNIKLYDNTELGT 127
Query: 260 NFLIRQFLLGLKDELRVPVQAQQPTSVTQAFLVALAYESALPXXXXXXXXXXXNFQVGRG 319
+ + F+ GLKD L+ V ++ P +++QA+ +A A E + +G
Sbjct: 128 VWEVGHFVAGLKDALKTHVLSKLPETISQAYHLAKAKERVMGEVMQGKKKWGMKIGRSKG 187
Query: 320 GEKQKLAPGELWKAQQLKEYRRAQGLCFKCGDKYIPGHVCSKQETPQLKAMELQEEAIVL 379
G+K K++ G+LWKAQQLKEYRR GLCF+CG+KY P H C++ Q+ +E + VL
Sbjct: 188 GDKSKISTGDLWKAQQLKEYRRIHGLCFRCGEKYSPNHQCAQIPAAQVNVVETIDHTDVL 247
Query: 380 TDELLDAVTGLELSEDSAN----LSLHALAGTSHTNIV 413
+D++L+AV +E+ + N LSL+A+AG +T +
Sbjct: 248 SDDILEAV--MEVEDLGQNPDMFLSLNAVAGWGNTGVT 283
>Os09g0387900
Length = 268
Score = 145 bits (365), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 87/237 (36%), Positives = 123/237 (51%), Gaps = 22/237 (9%)
Query: 22 IEDIG---KRLHLIDNKLAQQGERLDRVQTKVDLSMTSLGQVQQEQTMLXXXXXXXXXXX 78
+E +G ++L ++D KL +QGERLD+VQ KVDLS+ SLGQV QEQ +
Sbjct: 19 VEKVGLIQEKLEVMDKKLEKQGERLDQVQAKVDLSLESLGQVLQEQIHVMQAVKRTV--- 75
Query: 79 PESSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHGDSPREQVSRVPVTTSAPEVGEFAPR 138
P + PR + T AP +GE R
Sbjct: 76 PATLVIPTRTMEATSSVTREQPQVTIPMPTLT---PPPRVETGE----THAPHLGE-GNR 127
Query: 139 --------RQWSPKMDFPKFSGSDVRVWLDNCETFFLFYQIADGYKVSAAVLNMSGDAAN 190
R+ PKMDFPKF G D VW+DNCET+F YQI G+KVSAA LN+ G A++
Sbjct: 128 GVAHENHFRRNMPKMDFPKFDGPDASVWVDNCETYFAMYQIPAGFKVSAASLNLLGKASH 187
Query: 191 WYQEWKFEQGWHDWPMLKAALLGEFEVHLKYVKMDELLLLTQTGFVSDYRSKFNQLV 247
WY+ WK + G H W + A++ EF+ ++K + + L QTG V +++S+F+ L+
Sbjct: 188 WYKAWKQKVGLHVWEEFRDAVVKEFDCGTHHIKANAMFELKQTGSVDEHKSQFDDLM 244
>Os09g0135100 Conserved hypothetical protein
Length = 404
Score = 142 bits (359), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 79/172 (45%), Positives = 105/172 (61%), Gaps = 11/172 (6%)
Query: 269 GLKDELRVPVQAQQPTSVTQAFLVALAYESALPXXXXXXXXXXXNFQVGRGGEKQKLAPG 328
GLKDEL V AQ P +V QAF VAL +ESA + +G + PG
Sbjct: 148 GLKDELHYSVAAQLPENVHQAFQVALIFESA---HRMKKGVHKKEGYLTKGIDTPAKVPG 204
Query: 329 ELWKAQQLKEYRRAQGLCFKCGDKYIPGHVCSKQETPQLKAMELQEEAIVLTDELLDAVT 388
++WKAQQLKEY + GLCFKCGDKY P HVC+KQE PQLKAME+++ + +LTDE+LD V
Sbjct: 205 DIWKAQQLKEYHKTHGLCFKCGDKYAPRHVCAKQEGPQLKAMEVEQNSEMLTDEMLDVVA 264
Query: 389 GLELSEDSANLSLHALAGTSHTNIVQLRAL--------SSNQECRTIKRDDA 432
LE ++ LS+ A++G+ +QLRAL S+ + R +KR +A
Sbjct: 265 CLETQPENMLLSIQAISGSVAPKTIQLRALLDVQSLSPSAILDRRMVKRGNA 316
>Os06g0570000
Length = 242
Score = 129 bits (323), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 59/89 (66%), Positives = 71/89 (79%)
Query: 321 EKQKLAPGELWKAQQLKEYRRAQGLCFKCGDKYIPGHVCSKQETPQLKAMELQEEAIVLT 380
EK KLA GELWKAQQLKEYRRA LCFKCGDKY+PGHVC K + QLKAME+QE+ ++L+
Sbjct: 113 EKPKLATGELWKAQQLKEYRRAHDLCFKCGDKYVPGHVCVKPDNAQLKAMEVQEDQVILS 172
Query: 381 DELLDAVTGLELSEDSANLSLHALAGTSH 409
D+ LDAV ++ ED NLSLHA+A S+
Sbjct: 173 DDNLDAVVASDMVEDDCNLSLHAMAVASN 201
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/48 (77%), Positives = 41/48 (85%)
Query: 20 NTIEDIGKRLHLIDNKLAQQGERLDRVQTKVDLSMTSLGQVQQEQTML 67
+ +EDI KRL ID KLAQQGE LDRVQTKVDLSMTSLGQVQQEQ+ +
Sbjct: 20 DGVEDIAKRLTQIDLKLAQQGEWLDRVQTKVDLSMTSLGQVQQEQSQV 67
>Os03g0377450
Length = 350
Score = 122 bits (306), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 67/155 (43%), Positives = 89/155 (57%), Gaps = 9/155 (5%)
Query: 214 EFEVHLKYVKMDELLLLTQTGFVSDYRSKFNQLVYQIRLYDPLLSPNFLIRQFLLGLKDE 273
+FE + K+ L L QTG V+DY+S+F+ LVYQ+R++DP + L+ +F+LGLK+E
Sbjct: 192 QFESTAQCEKVQALQTLRQTGSVADYKSQFDSLVYQVRVFDPSVGGMMLLYRFILGLKEE 251
Query: 274 LRVPVQAQQPTSVTQAFLVALAYESALPXXXXXXXXXXXNFQVGRG-------GEKQKLA 326
+R + Q P +V QA +AL ES L VG E +
Sbjct: 252 IRSVLLVQLPDTVQQAAAIALVQESVLLDSGQKPLKKLTYKGVGTKVDTSVPISEPSAIK 311
Query: 327 P--GELWKAQQLKEYRRAQGLCFKCGDKYIPGHVC 359
P ELWKA+QLKEYRRA G+CFKCGDKY P H C
Sbjct: 312 PERAELWKAKQLKEYRRANGICFKCGDKYSPDHQC 346
>Os08g0451600 Peptidase aspartic, catalytic domain containing protein
Length = 707
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 72/167 (43%), Positives = 97/167 (58%), Gaps = 16/167 (9%)
Query: 267 LLGLKDELRVPVQAQQPTSVTQAFLVALAYESALPXXXXXXXXXXXNFQVGRGGE----- 321
+LGLK+++R V Q PT+V QA VAL ES L + GE
Sbjct: 1 MLGLKEDIRAAVMVQLPTTVQQAAAVALMQESVLLELSTKQSKRLMYKPLPTKGELPQGG 60
Query: 322 --KQKLAP--GELWKAQQLKEYRRAQGLCFKCGDKYIPGHVCSKQETPQLKAMELQEEAI 377
+ P ELWKA+QL++YRRA GLCFKCGDKY P H C+ Q+KAM++ E
Sbjct: 61 TDTPAIKPERAELWKARQLRDYRRANGLCFKCGDKYSPEHQCALGG--QIKAMQVTE--- 115
Query: 378 VLTDELLDAVTGLELSEDSAN--LSLHALAGTSHTNIVQLRALSSNQ 422
V+ D+LL+AVT E S+ N +SL++L+G SH N ++LRAL N+
Sbjct: 116 VIPDDLLNAVTAEEDSDQDENCHISLNSLSGASHVNTIRLRALVQNK 162
>AK106323
Length = 400
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 89/327 (27%), Positives = 145/327 (44%), Gaps = 45/327 (13%)
Query: 131 EVGEFAPR---RQWS---PKMDFPKFSGSDVRVWLDNCETFFLFYQIADGYKVSAAVLNM 184
E GEF RQ++ PK+DFPKF GSD + W CE +F G V A +
Sbjct: 39 ESGEFDSEHGDRQYNHRVPKLDFPKFDGSDSQEWRMKCEHYFDVNNTFPGLWVRIATIYF 98
Query: 185 SGDAANWYQEWKFEQGWHDWPMLKAALLGEFEVHLKYVKMDELLLLTQTGFVSDYRSKFN 244
G AA+W + + + W AA+ +F+ + ++ + Q G V ++ +F+
Sbjct: 99 LGRAASWLRSSRAHLRFPMWEDFCAAVSAKFDRDQHENLIRQMDSIKQNGTVWEFYERFD 158
Query: 245 QLVYQIRLYDPLLSPNFLIRQFLLGLKDELRVPVQAQQPTSVTQAFLVAL----AYESAL 300
+L+ Q+ +YDP LS +L +F GL+ E+R V Q+P + A VAL E++
Sbjct: 159 ELMNQLLVYDPTLSSKYLTHRFTKGLRREIRNAVLLQRPKDLESALAVALLQEEVMENSP 218
Query: 301 PXXXXXXXXXXXNFQV---GRGGEKQKLAPGE-------------------------LWK 332
P + + G+G L PG+ K
Sbjct: 219 PTTVREFKKSDGSSSLKINGKGAWPLPLPPGKGGGVPVSNRADERRSSDTVRSPTSLTEK 278
Query: 333 AQQLKEYRRAQGLCFKCGDKYIPGHVCSK----QETPQLKAMELQEEAIVLTDELLDAVT 388
LK YRRAQGLC+ C +K+ P H C+ +L + L+E++ V ++ +A
Sbjct: 279 VSALKSYRRAQGLCYVCAEKWSPNHKCASSVQLNVVQELLCLFLEEDSHVESE---NAGQ 335
Query: 389 GLELSEDSANLSLHALAGTSHTNIVQL 415
L+ + +SL A+ GT +++
Sbjct: 336 NGSLTRELMAISLQAVQGTEPDGTMRM 362
>Os05g0276900
Length = 212
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 72/201 (35%), Positives = 100/201 (49%), Gaps = 23/201 (11%)
Query: 170 QIADGYKVSAAVLNMSGDAANWYQEWKFEQGWHDWPMLKAALLGEFEVHLKYVKMDELLL 229
QI + + +S VL++ GDAA WYQ +K HDWP A++ EFE ++ L
Sbjct: 35 QILENFMISGVVLHLIGDAAQWYQSFKLVTPVHDWPHFCQAVIEEFECETEHETTFALQT 94
Query: 230 LTQTGFVSDYRSKFNQLVYQIRLYDPLLSPNFLIRQFLLGLKDELRVPVQAQQPTSVTQA 289
TQT V+DY+ F+ LVYQ+RL+D L + L E + +Q+ + Q
Sbjct: 95 FTQTDSVADYKKAFDSLVYQVRLFD-------LAYGAAVALAQEEVLSMQSHKSHKKLQF 147
Query: 290 FLVALAYESALPXXXXXXXXXXXNFQVGRGGEKQKLAPGELWKAQQLKEYRRAQGLCFKC 349
+ + ++ V K G+LWKA+QLK+YRRA GLCFKC
Sbjct: 148 KPIVYKPDQSI---------------VSVDTSPVKFEKGDLWKAKQLKDYRRANGLCFKC 192
Query: 350 GDKYIPGHVCSKQETPQLKAM 370
G KY P H C Q + QLK M
Sbjct: 193 GQKYSPEHKCVLQGS-QLKLM 212
>Os12g0264400
Length = 468
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 45/68 (66%), Positives = 55/68 (80%)
Query: 117 REQVSRVPVTTSAPEVGEFAPRRQWSPKMDFPKFSGSDVRVWLDNCETFFLFYQIADGYK 176
REQV P+ + + G + PRRQWSPKMD+PKF G+DVRVWLDNCET+F+FYQIA G+K
Sbjct: 131 REQVPYPPILPAPRDFGYYMPRRQWSPKMDYPKFDGTDVRVWLDNCETYFVFYQIAKGFK 190
Query: 177 VSAAVLNM 184
VSAA LN+
Sbjct: 191 VSAAALNL 198
>Os02g0522000 Retrotransposon gag protein family protein
Length = 380
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 120/262 (45%), Gaps = 38/262 (14%)
Query: 121 SRVPVTTSAPEVGE-----------FAPRRQWSPKMDFPKFSGSDVRVWLDNCETFFLFY 169
SR+P++ ++GE +PR PK +FP+F G + ++W N E +F Y
Sbjct: 125 SRLPISPVNFDLGEASVQSQFSSRSSSPRL---PKTNFPRFDGDNPKLWKKNSEKYFDMY 181
Query: 170 QIADGYKVSAAVLNMSGDAANWYQEWKFEQGWHDWPMLKAALLGEFEVHLKYVKMDELLL 229
Q+ + A L+ G+AA W Q ++ WP L + +F ++EL
Sbjct: 182 QVPYDSWANFATLHFVGNAALWLQTYEALHSVETWPELCVVVHNKFGKDKYQEHLEELES 241
Query: 230 LTQTGFVSDYRSKFNQLVYQIRLYDPLLSPNFLIRQFLLGLKDELRVPVQAQQPTSVTQA 289
L QT V Y SKF +L++++ +Y+ + + +F+ GLK E++ ++ +P +V A
Sbjct: 242 LRQTSGVDAYYSKFEELMHRVLVYNQAFDETYFVTKFVGGLKTEIKAAIKLHKPRTVDAA 301
Query: 290 FLVA-----LAYE------SALPXXXXXXXXXXXNFQVGRGGEKQKLAPGELWKAQQ--- 335
+A LA E + N+Q G+G Q AP + K ++
Sbjct: 302 LSLAKTQEDLALEIKKGGQKSTYKEGFKSTAFRVNYQ-GKGILGQ--APDDTTKTEEKPK 358
Query: 336 -------LKEYRRAQGLCFKCG 350
LK R+A+G CFKCG
Sbjct: 359 WEDCFESLKAARKAKGECFKCG 380
>Os12g0271900
Length = 614
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 116/268 (43%), Gaps = 11/268 (4%)
Query: 144 KMDFPKFSGSDVRVWLDNCETFFLFYQIADGYKVSAAVLNMSGDAANWYQEWKFEQGWHD 203
+DFP F G + W+ E +F YQ + KV A +++SG A W +
Sbjct: 189 NVDFPTFEGDYLESWIRKAEKYFSLYQTPEEDKVLLAEVHISGRADQWIESLAIATASLS 248
Query: 204 WPMLKAALLGEFEVHLKYVKMDELLLLTQTGFVSDYRSKFNQLVYQIRLYDPLLSPNFLI 263
WP K L F K + L Q G V Y KF + ++ +P L+ ++ +
Sbjct: 249 WPEFKTMLCQRFAAKSKIEITETFRNLKQYGSVDSYIDKFEDTMTLVKRSNPTLTKDYFL 308
Query: 264 RQFLLGLKDELRVPVQAQQPTSVTQAFLVALAYESALPXXXXXXXXXXXNFQVGRGGEKQ 323
F+ GLKD ++ P+++ S+ A+ A Y+ +P V +
Sbjct: 309 DYFISGLKDNIKRPLKSLSIYSLVTAYEHARNYD-VIPRSANTS-------SVPSNRKTP 360
Query: 324 KLAPGELWK--AQQLKEYRRAQGLCFKCGDKYIPGHVCSKQETPQLKAMELQEEAIVLTD 381
K+ P + K Q + + G F+C + ++PGH + T Q+ + +++E+ +L D
Sbjct: 361 KIPPKQPIKDNKQSAVTHTKFSGKYFRCNEPWVPGHGRVCKATKQVYLVTMEDESEILDD 420
Query: 382 ELLDAVTGLELSE-DSANLSLHALAGTS 408
+ ++ +L LH+L GT+
Sbjct: 421 AAYSTPDSPQKTDQQDTHLLLHSLEGTT 448
>Os03g0156800 Cyclin-like F-box domain containing protein
Length = 723
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 49/128 (38%), Positives = 70/128 (54%), Gaps = 7/128 (5%)
Query: 247 VYQIRLYDPLLSPNFLIRQFLLGLKDELRVPVQAQQPTSVTQAFLVALAYESALPXXXXX 306
+ QIR++DP + L+ +F+ GL +E+R V Q P + + LA +
Sbjct: 77 ISQIRVFDPSVGGKMLVTRFMNGLTEEIRAAVVVQLPDTES-----VLASRATKALKGKF 131
Query: 307 XXXXXXNFQVGRGGEKQKLAPGELWKAQQLKEYRRAQGLCFKCGDKYIPGHVCSKQETPQ 366
V ++ G+LWKA+QLK+YRRAQGLCFKCGDKY P H C+ Q
Sbjct: 132 VKLPQYKSDVSSDTTPGRVDKGDLWKAKQLKDYRRAQGLCFKCGDKYTPEHRCAVGG--Q 189
Query: 367 LKAMELQE 374
+KAM+L+E
Sbjct: 190 IKAMQLEE 197
>Os03g0300700 Retrotransposon gag protein family protein
Length = 244
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 82/157 (52%), Gaps = 3/157 (1%)
Query: 144 KMDFPKFSGSDVRVWLDNCETFFLFYQIADGYKVSAAVLNMSGDAANWYQEWKFEQGWHD 203
K+ FP FSG+ R+W+ C +F FY + VS A ++M G A W ++ ++ D
Sbjct: 73 KLKFPTFSGTFPRLWITKCTRYFEFYGMPMKMWVSWASMHMEGMAELWMMTYE-KRHERD 131
Query: 204 WPMLKAALLGEFEVHLKYVKMDELLLLTQTGF--VSDYRSKFNQLVYQIRLYDPLLSPNF 261
W A+ F + K+ LL L Q G VS+YR +F + +Y +L+DP+ S F
Sbjct: 132 WGRFCEAVEERFGPYDHKQKLTALLDLRQEGIMTVSEYRDQFEERLYHAKLFDPVSSNCF 191
Query: 262 LIRQFLLGLKDELRVPVQAQQPTSVTQAFLVALAYES 298
+ F+ GL++E+R + Q P +V A AL E+
Sbjct: 192 DVALFIRGLREEIRDRMWQQTPATVDAAAQSALVQEA 228
>Os04g0666200
Length = 500
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 88/213 (41%), Gaps = 10/213 (4%)
Query: 145 MDFPKFSGSDVRVWLDNCETFFLFYQIADGYKVSAAVLNMSGDAANWYQEWKFEQGWHDW 204
+DFP F G W+ E +F YQ + KV A +++SG A W + W
Sbjct: 290 VDFPTFEGDYPESWIRKAEKYFSLYQTPEEDKVLLAEVHISGRADQWIESSAVPTASLSW 349
Query: 205 PMLKAALLGEFEVHLKYVKMDELLLLTQTGFVSDYRSKFNQLVYQIRLYDPLLSPNFLIR 264
P K + F K + L Q G V Y KF + + ++ +P L+ ++ +
Sbjct: 350 PEFKTMVCQRFAAKSKIEITETFRNLKQYGSVDSYIDKFEETMALVKRSNPTLTEDYFLD 409
Query: 265 QFLLGLKDELRVPVQAQQPTSVTQAFLVALAYESALPXXXXXXXXXXXNFQVGRGGEKQK 324
F+ GLK ++ P+++ S+ A+ A Y+ +P + E K
Sbjct: 410 YFISGLKGHIKRPLKSLSIYSLVTAYEHARNYD-VIPRSANTS-------SIPSNRETPK 461
Query: 325 LAPGELWK--AQQLKEYRRAQGLCFKCGDKYIP 355
+ P K Q + + G CF+C + ++P
Sbjct: 462 IPPKHPTKDDKQSTVTHTKFSGKCFRCNEPWVP 494
>Os01g0392300
Length = 519
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 82/155 (52%), Gaps = 4/155 (2%)
Query: 144 KMDFPKF-SGSDVRVWLDNCETFFLFYQIADGYKVSAAVLNMSGDAANWYQEWKFEQGWH 202
K++FPKF S D WL++CE FF + G +V A +++G+A WY + +G
Sbjct: 337 KLEFPKFDSKEDPLNWLNHCEQFFHGQRTDAGDRVWLATYHLTGNAQEWYFHHEQHKGPP 396
Query: 203 DWPMLKAALLGEFEVHLKYVKMDELLLLTQTGFVSDYRSKFNQLVYQIRLYDPLLSPNFL 262
DW K +F +++ + EL LTQT V+ Y+ +F L R + LL+ N
Sbjct: 397 DWDTFKDLCYAQFGPPIRHNPLGELKRLTQTTTVAAYQCRF--LALASRTAE-LLTENQQ 453
Query: 263 IRQFLLGLKDELRVPVQAQQPTSVTQAFLVALAYE 297
++ GL+++L + V+ +P + +A +A A+E
Sbjct: 454 VQLLTAGLREDLAIDVEINRPDDLQEAMSLARAFE 488
>Os01g0204400
Length = 142
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 34/59 (57%), Positives = 44/59 (74%), Gaps = 7/59 (11%)
Query: 326 APG-----ELWKAQQLKEYRRAQGLCFKCGDKYIPGHVCSKQETPQLKAMELQEEAIVL 379
APG +LWKA+QLK+YRRAQGLCFKCGDKY P H C+ Q+KAM+L+E +++
Sbjct: 79 APGRVDKEDLWKAKQLKDYRRAQGLCFKCGDKYTPEHRCA--VGGQIKAMQLEENNLMM 135
>Os10g0317000 Retrotransposon gag protein family protein
Length = 1476
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 122/297 (41%), Gaps = 37/297 (12%)
Query: 127 TSAPEVGEFAPRRQWSPKMDFPKFSG-SDVRVWLDNCETFFLFYQIADGYKVSAAVLNMS 185
T AP+ P + W P +FPK+ G +D +++ CE+FF+ + + A N+
Sbjct: 56 TPAPD----RPPKHWRP--EFPKYDGKTDPLAFINRCESFFIQQHVIPAERTWMASYNLQ 109
Query: 186 GDAANWYQEWKFEQGWHDWPMLKAALLGEFEVHLKYVKMDELLLLTQTGFVSDYRSKFNQ 245
A WY + +G W K L + L+ V + EL +T V DY+ +F
Sbjct: 110 DGAQLWYMHVQDNEGTPTWERFKELLNLRYGPPLRSVPLFELSACRRTSTVEDYQDRFQA 169
Query: 246 LVYQIRLYDPLLSPNFLIRQFLLGLKDELRVPVQAQQPTSVTQAFLVALAYE----SALP 301
L+ + L ++ F GL L + VQ Q+P S+ +A +A +E P
Sbjct: 170 LLPRAG----RLEEAQQVQLFTGGLLPPLSLQVQQQKPASLEEAMSLARQFELMEPYLFP 225
Query: 302 XXXXXXXXXXXNFQVGRGGEKQKLAPG----------ELWKAQQLKEYRRAQGLCFKCGD 351
G K AP L +AQQ E RR GLC+ C +
Sbjct: 226 ATTSARGVLPTPAPRPSTGPVVKPAPATVTVEGRPVKRLSQAQQ--EERRRLGLCYNCDE 283
Query: 352 KYIPGH--VCSKQETPQLKAMELQEEAIVLTDELLDAVTGLELSEDSANLSLHALAG 406
KY H VC + + A+E ++ + E E + ++ SLHA+AG
Sbjct: 284 KYSRSHNKVCKRLFFVEGGAIEEGDDTVEDDTE--------EATVEAPVFSLHAVAG 332
>Os12g0450264
Length = 640
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 94/232 (40%), Gaps = 11/232 (4%)
Query: 133 GEFAPRRQWSPKMDFPKFSGSDVRVWLDNCETFFLFYQIADGYKVSAAVLNMSGDAANWY 192
G +A P+++ P F+G D WL CE FF V+ ++ + G AA W+
Sbjct: 128 GHYAEAVLKGPRLEIPLFNGDDPIDWLKQCEKFFELTGTPMDQWVNMSLAHFQGRAAKWF 187
Query: 193 QEWKFEQGWHDWPMLKAALLGEFEVHLKYVKMDELLLLTQTGF-VSDYRSKFNQLVYQIR 251
+ WP A + F + ++ + Q G V Y KF + V +R
Sbjct: 188 RGVGLPWQIISWPQWCAMISTRFSAANVHEAVELFQNVKQYGMTVEQYIDKFEEYVDLVR 247
Query: 252 LYDPLLSPNFLIRQFLLGLKDELRVPVQAQQPTSVTQAFLVALAYESALPXXXXX---XX 308
P L ++ F+ GL+ +++ V Q+P + +++ A YE A
Sbjct: 248 RDHPYLQEQYITSCFIGGLRSDIKHDVCGQKPQGLLESYWYAKTYEKAANAKRNSFSINR 307
Query: 309 XXXXNFQVGRGGEKQK-LAPGELWKAQQLKEYRRAQGLCFKCGDKYIPGHVC 359
NF +G G Q AP Q+ + ++ + C+ C + + P H C
Sbjct: 308 NRNQNFNMGNQGRNQAGKAP------QRNEGEKKEEKKCWFCKEPWFPRHQC 353
>Os06g0638300
Length = 695
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 68/156 (43%)
Query: 144 KMDFPKFSGSDVRVWLDNCETFFLFYQIADGYKVSAAVLNMSGDAANWYQEWKFEQGWHD 203
K +FP+F+G W+ +F + + KV A + ++G A W +
Sbjct: 116 KFNFPEFNGEHPEAWIRKANKYFSLTKTPEEEKVLVAEVYITGKADQWIDSYDIPTETLT 175
Query: 204 WPMLKAALLGEFEVHLKYVKMDELLLLTQTGFVSDYRSKFNQLVYQIRLYDPLLSPNFLI 263
WP + F K D L Q V Y KF +++ ++ +P L+ + +
Sbjct: 176 WPEFCTMVCKRFAAKSKVEITDTFRNLKQYSSVETYIDKFEEIMPLVKRNNPNLNEEYFL 235
Query: 264 RQFLLGLKDELRVPVQAQQPTSVTQAFLVALAYESA 299
F+ GLK+ ++ P+++ S+ QA+ A Y+S
Sbjct: 236 DYFISGLKEHIKRPLKSMGIHSLVQAYEHARNYDSG 271
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.318 0.133 0.392
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 11,941,629
Number of extensions: 448447
Number of successful extensions: 1170
Number of sequences better than 1.0e-10: 29
Number of HSP's gapped: 1154
Number of HSP's successfully gapped: 31
Length of query: 437
Length of database: 17,035,801
Length adjustment: 104
Effective length of query: 333
Effective length of database: 11,605,545
Effective search space: 3864646485
Effective search space used: 3864646485
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 157 (65.1 bits)