Os05g0374700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description :
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Os05g0374700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description :
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 268.48 | 0.77 | 3.29 | -0.268 | 0.0475 | 1.29 | 0.16 | 3.08 | -0.118 | 10.7 | 46.36 | 30 | -- | -- |
| 277.32 | 0.776 | 3.28 | -0.217 | 0.0493 | 1.02 | 0.625 | -- | -0.0986 | 11.8 | 45.58 | 29 | -- | -- |
| 268.34 | 0.763 | 3.29 | -0.271 | 0.0648 | 1.39 | -- | 3.53 | -0.115 | 11.8 | 48.44 | 29 | -- | -- |
| 279.25 | 0.778 | 3.28 | -0.189 | 0.0536 | 0.954 | -- | -- | -0.101 | 12.6 | 44.49 | 29 | -- | -- |
| 268.59 | 0.763 | 3.29 | -0.267 | -- | 1.41 | -- | 3.49 | -0.114 | -- | 48.22 | 29 | -- | -- |
| 286.91 | 0.794 | 3.28 | -0.263 | 0.204 | -- | 0.551 | -- | -0.123 | 11.9 | -- | -- | -- | -- |
| 288.19 | 0.795 | 3.28 | -0.24 | 0.203 | -- | -- | -- | -0.12 | 12.4 | -- | -- | -- | -- |
| 279.28 | 0.778 | 3.28 | -0.148 | -- | 0.923 | -- | -- | -0.102 | -- | 40.68 | 29 | -- | -- |
| 280.18 | 0.78 | 3.27 | -- | 0.0545 | 0.984 | -- | -- | -0.0794 | 12.7 | 44.68 | 29 | -- | -- |
| 290.79 | 0.797 | 3.29 | -0.247 | -- | -- | -- | -- | -0.124 | -- | -- | -- | -- | -- |
| 289.7 | 0.796 | 3.28 | -- | 0.207 | -- | -- | -- | -0.0936 | 12.5 | -- | -- | -- | -- |
| 280.25 | 0.78 | 3.27 | -- | -- | 0.933 | -- | -- | -0.0842 | -- | 40.66 | 29 | -- | -- |
| 292.39 | 0.798 | 3.28 | -- | -- | -- | -- | -- | -0.0963 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 267.83 | wind | 1.0 | 270 | < th | dose dependent | rect. | 11 | 1 |
| 2 | 267.98 | radiation | 40.0 | 30 | > th | dose dependent | rect. | 10 | 4 |
| 22 | 268.03 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 8 | 1 |
| 23 | 268.03 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 8 | 1 |
| 24 | 268.08 | precipitation | 0.1 | 720 | > th | dose independent | rect. | 9 | 4 |
| 25 | 268.08 | precipitation | 0.1 | 720 | > th | dose dependent | rect. | 9 | 4 |
| 57 | 268.55 | humidity | 90.0 | 720 | > th | dose independent | rect. | 10 | 2 |
| 59 | 268.59 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 10 | 1 |
| 97 | 269.14 | radiation | 40.0 | 30 | > th | dose dependent | sin | 18 | NA |
| 127 | 269.67 | wind | 1.0 | 10 | < th | dose dependent | rect. | 11 | 1 |
| 226 | 270.48 | radiation | 40.0 | 30 | > th | dose dependent | no | NA | NA |
| 458 | 270.81 | wind | 1.0 | 270 | < th | dose independent | rect. | 11 | 1 |
| 482 | 271.09 | radiation | 40.0 | 30 | > th | dose independent | rect. | 10 | 3 |
| 572 | 272.03 | wind | 1.0 | 10 | < th | dose independent | rect. | 11 | 1 |
| 618 | 272.25 | wind | 1.0 | 30 | < th | dose independent | rect. | 4 | 1 |
| 625 | 272.37 | wind | 1.0 | 30 | < th | dose dependent | rect. | 4 | 1 |