BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os04g0618200 Os04g0618200|AK060820
(428 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os04g0618200 UDP-glucose 4-epimerase family protein 843 0.0
Os08g0129700 UDP-glucose 4-epimerase family protein 688 0.0
Os07g0139400 UDP-glucose 4-epimerase family protein 648 0.0
Os08g0374800 Similar to UDP-galactose 4-epimerase-like protein 267 1e-71
Os05g0595100 Similar to UDPglucose 4-epimerase-like protein 256 3e-68
Os09g0323000 Similar to UDP-galactose 4-epimerase-like protein 252 5e-67
Os09g0526700 Similar to UDP-glucose 4-epimerase (EC 5.1.3.2... 242 4e-64
AK110765 179 3e-45
Os03g0278200 NAD-dependent epimerase/dehydratase family pro... 107 2e-23
Os02g0791500 Similar to Nucleotide sugar epimerase-like pro... 81 2e-15
Os08g0526100 NAD-dependent epimerase/dehydratase family pro... 81 2e-15
Os03g0249500 Similar to Nucleotide sugar epimerase-like pro... 79 7e-15
Os09g0504000 Similar to Nucleotide sugar epimerase-like pro... 74 2e-13
>Os04g0618200 UDP-glucose 4-epimerase family protein
Length = 428
Score = 843 bits (2177), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/428 (95%), Positives = 410/428 (95%)
Query: 1 PLHXXXXXXXXXXXXXXXXXXFHRPAPLGSDRLEGEGMDFGDSRRKPNVVGKFTVAVALT 60
PLH FHRPAPLGSDRLEGEGMDFGDSRRKPNVVGKFTVAVALT
Sbjct: 1 PLHAARGRLRRAGWASGLGASFHRPAPLGSDRLEGEGMDFGDSRRKPNVVGKFTVAVALT 60
Query: 61 VMCIIVLKQSPGFTSTSVFSRHEIGVTHVLVTGGAGYIGSHATLRLLRDNYRVTIVDNLS 120
VMCIIVLKQSPGFTSTSVFSRHEIGVTHVLVTGGAGYIGSHATLRLLRDNYRVTIVDNLS
Sbjct: 61 VMCIIVLKQSPGFTSTSVFSRHEIGVTHVLVTGGAGYIGSHATLRLLRDNYRVTIVDNLS 120
Query: 121 RGNMGAVRVLQRLFPEPGRLQFIYADLGDAKAVNKIFSENAFDAVMHFAAVAYVGESTLE 180
RGNMGAVRVLQRLFPEPGRLQFIYADLGDAKAVNKIFSENAFDAVMHFAAVAYVGESTLE
Sbjct: 121 RGNMGAVRVLQRLFPEPGRLQFIYADLGDAKAVNKIFSENAFDAVMHFAAVAYVGESTLE 180
Query: 181 PLRYYHNITSNTLTVLEAMAAYNVKTLIYSSTCATYGEPDTMPITEATPQNPINPYGKAK 240
PLRYYHNITSNTLTVLEAMAAYNVKTLIYSSTCATYGEPDTMPITEATPQNPINPYGKAK
Sbjct: 181 PLRYYHNITSNTLTVLEAMAAYNVKTLIYSSTCATYGEPDTMPITEATPQNPINPYGKAK 240
Query: 241 KMAEDIILDFSKRSEMAVMILRYFNVIGSDPGGRLGEAPRPELREHGRISGACFDAALGI 300
KMAEDIILDFSKRSEMAVMILRYFNVIGSDPGGRLGEAPRPELREHGRISGACFDAALGI
Sbjct: 241 KMAEDIILDFSKRSEMAVMILRYFNVIGSDPGGRLGEAPRPELREHGRISGACFDAALGI 300
Query: 301 IPGLKVRGTDYPTADGTCIRDYIDVTDLVDAHVKALDKAQPGKVGIYNVGTGHGRSVKEF 360
IPGLKVRGTDYPTADGTCIRDYIDVTDLVDAHVKALDKAQPGKVGIYNVGTGHGRSVKEF
Sbjct: 301 IPGLKVRGTDYPTADGTCIRDYIDVTDLVDAHVKALDKAQPGKVGIYNVGTGHGRSVKEF 360
Query: 361 VEACKSATGASIKVSFLTRRPGDYAEVYSDPSKIHDELNWTARYIDLRESLSTAWKWQKA 420
VEACKSATGASIKVSFLTRRPGDYAEVYSDPSKIHDELNWTARYIDLRESLSTAWKWQKA
Sbjct: 361 VEACKSATGASIKVSFLTRRPGDYAEVYSDPSKIHDELNWTARYIDLRESLSTAWKWQKA 420
Query: 421 HPNGYGSA 428
HPNGYGSA
Sbjct: 421 HPNGYGSA 428
>Os08g0129700 UDP-glucose 4-epimerase family protein
Length = 406
Score = 688 bits (1775), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 325/392 (82%), Positives = 358/392 (91%), Gaps = 1/392 (0%)
Query: 37 GMDFGDSRRKPNVVGKFTVAVALTVMCIIVLKQSPGFTSTSVFSRHEIGVTHVLVTGGAG 96
GM++ D+RRKP+ VGK A+ LT +CI +LKQSPGF +SVFSRHE GVTHVLVTGGAG
Sbjct: 14 GMEYFDARRKPHNVGKVIAALVLTTLCIFILKQSPGFGGSSVFSRHEPGVTHVLVTGGAG 73
Query: 97 YIGSHATLRLLRDNYRVTIVDNLSRGNMGAVRVLQRLFPEPGRLQFIYADLGDAKAVNKI 156
YIGSHA+LRLL+DNYRVTIVDNLSRGNMGAV+VLQ LFP+PGRLQFIYADLGD K VNKI
Sbjct: 74 YIGSHASLRLLKDNYRVTIVDNLSRGNMGAVKVLQELFPQPGRLQFIYADLGDQKTVNKI 133
Query: 157 FSENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLTVLEAMAAYNVKTLIYSSTCATY 216
F+ENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTL +LEAMA++ VKTLIYSSTCATY
Sbjct: 134 FAENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLLILEAMASHGVKTLIYSSTCATY 193
Query: 217 GEPDTMPITEATPQNPINPYGKAKKMAEDIILDFSK-RSEMAVMILRYFNVIGSDPGGRL 275
GEP+ MPI E T Q PINPYGKAKKMAEDIILDF+K R +MAVMILRYFNVIGSDP GRL
Sbjct: 194 GEPEKMPIVETTRQLPINPYGKAKKMAEDIILDFTKGRKDMAVMILRYFNVIGSDPEGRL 253
Query: 276 GEAPRPELREHGRISGACFDAALGIIPGLKVRGTDYPTADGTCIRDYIDVTDLVDAHVKA 335
GEAPRPELREHGRISGACFDAALGIIPGLKV+GTDYPT DGTCIRDYIDVTDLVDAHVKA
Sbjct: 254 GEAPRPELREHGRISGACFDAALGIIPGLKVKGTDYPTTDGTCIRDYIDVTDLVDAHVKA 313
Query: 336 LDKAQPGKVGIYNVGTGHGRSVKEFVEACKSATGASIKVSFLTRRPGDYAEVYSDPSKIH 395
L+KA+P KVGIYNVGTG GRSVKEFV+ACK ATG +IK+ +L+RRPGDYAEVYSDP+KI+
Sbjct: 314 LNKAEPSKVGIYNVGTGRGRSVKEFVDACKKATGVNIKIEYLSRRPGDYAEVYSDPTKIN 373
Query: 396 DELNWTARYIDLRESLSTAWKWQKAHPNGYGS 427
ELNWTA+Y DL+ESLS AW+WQK+HP GYGS
Sbjct: 374 TELNWTAQYTDLKESLSVAWRWQKSHPRGYGS 405
>Os07g0139400 UDP-glucose 4-epimerase family protein
Length = 421
Score = 648 bits (1672), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 313/392 (79%), Positives = 343/392 (87%), Gaps = 3/392 (0%)
Query: 38 MDFGDSRRKPNVVGKFTVAVALTVMCIIVLKQSPGFTST-SVFSRHEIGVTHVLVTGGAG 96
MDF D +RKP + K + LT MC+++L Q P T SVFS HE GVTHVLVTGGAG
Sbjct: 23 MDFSDPKRKPRYLSKILMVALLTAMCVVMLTQPPCHRRTPSVFSIHEPGVTHVLVTGGAG 82
Query: 97 YIGSHATLRLLRDNYRVTIVDNLSRGNMGAVRVLQRLFPEPGRLQFIYADLGDAKAVNKI 156
YIGSHA LRLL+D++RVTIVDNLSRGNMGA++VLQ LF EPGRLQFIYADLGD KAVN+I
Sbjct: 83 YIGSHAALRLLKDSFRVTIVDNLSRGNMGAIKVLQNLFSEPGRLQFIYADLGDPKAVNRI 142
Query: 157 FSENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLTVLEAMAAYNVKTLIYSSTCATY 216
F+ENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTL VLEAMAA+NV+TLIYSSTCATY
Sbjct: 143 FAENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLVVLEAMAAHNVRTLIYSSTCATY 202
Query: 217 GEPDTMPITEATPQNPINPYGKAKKMAEDIILDF--SKRSEMAVMILRYFNVIGSDPGGR 274
GEP+ MPITE TPQ PINPYGKAKKMAEDIILDF SK+++MAVMILRYFNVIGSDP GR
Sbjct: 203 GEPEKMPITEGTPQFPINPYGKAKKMAEDIILDFSKSKKADMAVMILRYFNVIGSDPEGR 262
Query: 275 LGEAPRPELREHGRISGACFDAALGIIPGLKVRGTDYPTADGTCIRDYIDVTDLVDAHVK 334
LGEAP+PELREHGRISGACFDAALGIIPGLKV+GTDY T DGTC+RDYIDVTDLVDAHVK
Sbjct: 263 LGEAPKPELREHGRISGACFDAALGIIPGLKVKGTDYETPDGTCVRDYIDVTDLVDAHVK 322
Query: 335 ALDKAQPGKVGIYNVGTGHGRSVKEFVEACKSATGASIKVSFLTRRPGDYAEVYSDPSKI 394
AL+KA+ GKVGIYNVGTG GRSVKEFVEACK ATG IKV + RRPGDYAEVYSDP+KI
Sbjct: 323 ALNKAERGKVGIYNVGTGKGRSVKEFVEACKKATGVDIKVDYFPRRPGDYAEVYSDPAKI 382
Query: 395 HDELNWTARYIDLRESLSTAWKWQKAHPNGYG 426
+ ELNWTA++ DL ESL AW WQK H +GYG
Sbjct: 383 NSELNWTAQHTDLLESLRVAWTWQKKHRSGYG 414
>Os08g0374800 Similar to UDP-galactose 4-epimerase-like protein
Length = 408
Score = 267 bits (683), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 154/355 (43%), Positives = 203/355 (57%), Gaps = 23/355 (6%)
Query: 85 GVTHVLVTGGAGYIGSHATLRLLRDNYRVTIVDNLSRGNMGAVRVLQRLFPEPGR-LQFI 143
GV VLVTGGAGYIGSHA L+LL +R +VDNL+ + AVR + L + R L F
Sbjct: 10 GVRTVLVTGGAGYIGSHAVLQLLLAGFRAVVVDNLNNSSELAVRRVAALAGDHSRNLAFH 69
Query: 144 YADLGDAKAVNKIFSENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLTVLEAMAAYN 203
DL D A+ K+F+ FDAV+HFA + VGES +PL YY N + T+ +LE M+A+
Sbjct: 70 KVDLRDKGALEKVFASTRFDAVVHFAGLKAVGESVQKPLLYYDNNVNGTVNLLEVMSAHG 129
Query: 204 VKTLIYSSTCATYGEPDTMPITEATPQNPINPYGKAKKMAEDIILDFSKRS-EMAVMILR 262
K L++SS+ A YG P P TE P P NPYGK K + EDI D + E +++LR
Sbjct: 130 CKKLVFSSSAAVYGSPKNSPCTEEFPLTPNNPYGKTKLVVEDICRDIYRTDPEWKIILLR 189
Query: 263 YFNVIGSDPGGRLGEAP-------RPELREHGRISGACFDAALGIIPGLKVRGTDYPTAD 315
YFN +G+ P G LGE P P +++ A+G P L + G DY T D
Sbjct: 190 YFNPVGAHPSGYLGEDPCGIPNNLMPYVQQ----------VAVGRRPALTILGNDYATRD 239
Query: 316 GTCIRDYIDVTDLVDAHVKALDKA-QPGKVGI--YNVGTGHGRSVKEFVEACKSATGASI 372
GT +RDYI V DL D H+ AL K + +G YN+GTG G SV E V+A + A+G I
Sbjct: 240 GTGVRDYIHVVDLADGHIAALQKLFESSSIGCEAYNLGTGKGTSVLEIVKAFEKASGKKI 299
Query: 373 KVSFLTRRPGDYAEVYSDPSKIHDELNWTARYIDLRESLSTAWKWQKAHPNGYGS 427
+ RRPGD ++S P+K ELNW A++ + E W W +P GYGS
Sbjct: 300 PLIIGPRRPGDAEILFSLPAKAEKELNWKAKF-GIDEMCRDQWNWASKNPYGYGS 353
>Os05g0595100 Similar to UDPglucose 4-epimerase-like protein
Length = 354
Score = 256 bits (653), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 144/352 (40%), Positives = 200/352 (56%), Gaps = 24/352 (6%)
Query: 89 VLVTGGAGYIGSHATLRLLRDNYRVTIVDNLSRGN-MGAVRVLQRLFPEPGRLQFIYADL 147
+LVTGGAGYIGSH L+LL+ +RV ++DNL + + +RV + L F DL
Sbjct: 9 ILVTGGAGYIGSHTVLQLLQLGFRVVVLDNLDNASELAILRVRELAGHNANNLDFRKVDL 68
Query: 148 GDAKAVNKIFSENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLTVLEAMAAYNVKTL 207
D +A+++IFS F+AV+HFA + VGES +PL YY N T+T+L+ MAA+ L
Sbjct: 69 RDKQALDQIFSSQRFEAVIHFAGLKAVGESVQKPLLYYDNNLIGTITLLQVMAAHGCTKL 128
Query: 208 IYSSTCATYGEPDTMPITEATPQNPINPYGKAKKMAEDIILDF-SKRSEMAVMILRYFNV 266
++SS+ YG P +P TE +P +NPYG+ K + ED+ D + +++LRYFN
Sbjct: 129 VFSSSATVYGWPKEVPCTEESPLCAMNPYGRTKLVIEDMCRDLHASDPNWKIILLRYFNP 188
Query: 267 IGSDPGGRLGEAP-------RPELREHGRISGACFDAALGIIPGLKVRGTDYPTADGTCI 319
+G+ P G +GE P P +++ A+G P L V GTDY T DGT +
Sbjct: 189 VGAHPSGYIGEDPCGIPNNLMPFVQQ----------VAVGRRPALTVYGTDYNTKDGTGV 238
Query: 320 RDYIDVTDLVDAHVKALDK--AQPGKVG--IYNVGTGHGRSVKEFVEACKSATGASIKVS 375
RDYI V DL D H+ AL K ++G +YN+GTG G SV E V A + A+G I +
Sbjct: 239 RDYIHVVDLADGHIAALRKLYEDSDRIGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLV 298
Query: 376 FLTRRPGDYAEVYSDPSKIHDELNWTARYIDLRESLSTAWKWQKAHPNGYGS 427
F RRPGD VY+ +K EL W A+Y + E W W +P GYGS
Sbjct: 299 FAGRRPGDAEIVYAQTAKAEKELKWKAKY-GVEEMCRDLWNWASKNPYGYGS 349
>Os09g0323000 Similar to UDP-galactose 4-epimerase-like protein
Length = 369
Score = 252 bits (643), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 143/350 (40%), Positives = 193/350 (55%), Gaps = 22/350 (6%)
Query: 89 VLVTGGAGYIGSHATLRLLRDNYRVTIVDNLSRGNMGAVRVLQRLFPEPGR-LQFIYADL 147
VLVTGGAGYIGSH L+LL +RV + D+L + AVR + L + R L D+
Sbjct: 20 VLVTGGAGYIGSHTVLQLLAAGFRVVVADSLGNSSELAVRRVAALAGDKARNLSLHKVDI 79
Query: 148 GDAKAVNKIFSENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLTVLEAMAAYNVKTL 207
D + K+FS FDAV+HFA + VGES +PL YY + + T+ +LE MAA+ K L
Sbjct: 80 RDKGGLEKVFSSTRFDAVVHFAGLKAVGESVQKPLLYYDHNVAGTIILLEVMAAHGCKKL 139
Query: 208 IYSSTCATYGEPDTMPITEATPQNPINPYGKAKKMAEDIILD-FSKRSEMAVMILRYFNV 266
++SS+ A YG P P TE P P NPYG+ K +AE+I D + SE ++++LRYFN
Sbjct: 140 VFSSSAAVYGSPKNSPCTEEFPLTPHNPYGRTKLIAEEICRDIYHSDSEWSIILLRYFNP 199
Query: 267 IGSDPGGRLGEAP-------RPELREHGRISGACFDAALGIIPGLKVRGTDYPTADGTCI 319
+G+ P G LGE P P +++ A+G P L + G DY T DGT +
Sbjct: 200 VGAHPSGYLGEDPCGIPNNLMPFVQQ----------VAVGRRPSLTIFGNDYATKDGTGV 249
Query: 320 RDYIDVTDLVDAHVKALDKAQPGKVGI--YNVGTGHGRSVKEFVEACKSATGASIKVSFL 377
RDYI V DL + H+ AL K +G YN+GTG G SV E V A + +G I +
Sbjct: 250 RDYIHVVDLAEGHIAALRKLFESSIGCQAYNLGTGKGTSVLEIVNAFEKVSGKKIPLVIG 309
Query: 378 TRRPGDYAEVYSDPSKIHDELNWTARYIDLRESLSTAWKWQKAHPNGYGS 427
RRPGD ++S +K E W A+Y + E W W +P GY S
Sbjct: 310 PRRPGDAEILFSSAAKAEREFKWKAKY-GIEEMCRDQWNWASKNPFGYAS 358
>Os09g0526700 Similar to UDP-glucose 4-epimerase (EC 5.1.3.2) (Galactowaldenase)
(UDP-galactose 4-epimerase)
Length = 373
Score = 242 bits (617), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 140/353 (39%), Positives = 191/353 (54%), Gaps = 26/353 (7%)
Query: 89 VLVTGGAGYIGSHATLRLLRDNYRVTIVDNLSRGNMGAVRVLQRLFPE--PGRLQFIYAD 146
VLVTGGAGYIG+H LRLL + VT+VDN A+ ++ + RL FI D
Sbjct: 28 VLVTGGAGYIGTHTVLRLLEKGFAVTVVDNFHNSVPEALDRVRLIAGAALSARLDFIAGD 87
Query: 147 LGDAKAVNKIFSENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLTVLEAMAAYNVKT 206
L + K+F+ +DAV+HFA + VGES P YY N + T+ + AM Y K
Sbjct: 88 LKSKDDMEKVFAAKRYDAVIHFAGLKAVGESVAHPQMYYENNVAGTMNLYSAMTKYGCKK 147
Query: 207 LIYSSTCATYGEPDTMPITEATPQNPINPYGKAKKMAEDIILDFSKRS-EMAVMILRYFN 265
+++SS+ YG+P+ P E + + +NPYG K + E+ EM V++LRYFN
Sbjct: 148 IVFSSSATVYGQPEKTPCVEDSKLSALNPYGTTKLVLENYFRQVQAADPEMRVILLRYFN 207
Query: 266 VIGSDPGGRLGEAPR-------PELREHGRISGACFDAALGIIPGLKVRGTDYPTADGTC 318
IG+ G +GE PR P +++ A+G P L V G DYPT DGT
Sbjct: 208 PIGAHRSGDIGEDPRGIPNNLLPYIQQ----------VAVGRRPELNVYGVDYPTRDGTA 257
Query: 319 IRDYIDVTDLVDAHVKALDK--AQPGKVGI--YNVGTGHGRSVKEFVEACKSATGASIKV 374
IRDYI V DL D H+ AL+K A P +G YN+GTG G +V E V+A + A+G I +
Sbjct: 258 IRDYIHVVDLADGHIAALEKLFATP-DIGCVAYNLGTGCGTTVLEVVKAFEEASGKKIPI 316
Query: 375 SFLTRRPGDYAEVYSDPSKIHDELNWTARYIDLRESLSTAWKWQKAHPNGYGS 427
RRPGD EVY+ K EL W+AR+ + + W W K +P GY +
Sbjct: 317 KICPRRPGDCTEVYASTDKAKKELGWSARF-GIEDMCRDQWNWAKKNPYGYSA 368
>AK110765
Length = 375
Score = 179 bits (454), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 126/371 (33%), Positives = 180/371 (48%), Gaps = 36/371 (9%)
Query: 89 VLVTGGAGYIGSHATL-RLLRDNYRVTIVDNLSRGNMGAVRVLQRL----FP-------- 135
+L+ GGAGYIGSH L LL YRVT++DN A + L+++ P
Sbjct: 8 ILIPGGAGYIGSHVALVTLLTRKYRVTVLDNYHNAFPAACKRLEQIAIDELPAGASQQDK 67
Query: 136 EPGRLQFIYADLGDAKAVNKIFS----ENAFDAVMHFAAVAYVGESTLEPLRYYHNITSN 191
+ ++ DL + K+F ++ V+ AA+ VGES+ P+ YY
Sbjct: 68 DDCKVDVFKGDLRSKDDIRKVFDAYKGDDKIWGVILCAALKAVGESSEIPIDYYDVNVGG 127
Query: 192 TLTVLEAMAAYNVKTLIYSSTCATYGEPDTMPITEATPQNPINPYGKAKKMAEDIILDFS 251
+ +L+ M L+YSS+ YG P +PI E+T P + YG+ K M+E II D
Sbjct: 128 LVNLLKVMHDNGCNRLVYSSSATVYGTPPKVPIPESTRLAPESVYGRTKWMSEIIIRDVC 187
Query: 252 KR-SEMAVMILRYFNVIGSDPGGRLGEAPRPELREHGRISGACFDAALGIIP--GLKVRG 308
E + LRYFN G+ G++GE PR + G + A+G GLKV G
Sbjct: 188 DAYPEFRAIGLRYFNPAGAHKSGKIGEDPR---GKPGNLLPLLAQMAVGKYREGGLKVFG 244
Query: 309 TDYPTADGTCIRDYIDVTDLVDAHVKAL-----------DKAQP-GKVGIYNVGTGHGRS 356
DYPT DGTC+RDYI + DL HV A+ DK + GK +N+G G G S
Sbjct: 245 NDYPTPDGTCVRDYIHIEDLAGGHVNAVEALERDDIFAADKTETHGKYRAFNLGKGVGMS 304
Query: 357 VKEFVEACKSATGASIKVSFLTRRPGDYAEVYSDPSKIHDELNWTARYIDLRESLSTAWK 416
V V+A + +G + + RR GD ++ +DPS EL + A L + W+
Sbjct: 305 VLNMVDAMRKVSGYEFPHTIVDRRTGDVPDLTADPSLAEKELGFKATR-SLDDMAQDLWR 363
Query: 417 WQKAHPNGYGS 427
WQ +P GYG
Sbjct: 364 WQSNNPQGYGE 374
>Os03g0278200 NAD-dependent epimerase/dehydratase family protein
Length = 675
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 99/355 (27%), Positives = 156/355 (43%), Gaps = 51/355 (14%)
Query: 88 HVLVTGGAGYIGSHATLRLLRD--NYRVTIVDNL----SRGNMGAVRVLQRLFPEPGRLQ 141
++L+TG AG+I SH RL+R+ +Y++ ++D L S N+ R P P +
Sbjct: 8 NILITGAAGFIASHVANRLVRNYPHYKIVVLDKLDYCSSLSNLNPSR------PSPN-FK 60
Query: 142 FIYADLGDAKAVNKIFSENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLTVLEAMAA 201
F+ D+ A VN + + + D +MHFAA +V S + N T +LEA
Sbjct: 61 FVKGDIASADLVNYLLTTESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKV 120
Query: 202 Y-NVKTLIYSSTCATYGEPDTMPIT---EATPQNPINPYGKAKKMAEDIILDFSKRSEMA 257
++ I+ ST YGE D + EA+ P NPY K AE +++ + + +
Sbjct: 121 TGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLP 180
Query: 258 VMILRYFNVIGSDPGGRLGEAPRPELREHGRISGACFDAALGIIPG---LKVRGTDYPT- 313
V+ R NV G + PE +IP L +RG P
Sbjct: 181 VITTRGNNVYGPNQF--------PE----------------KLIPKFILLAMRGLPLPIH 216
Query: 314 ADGTCIRDYIDVTDLVDAHVKALDKAQPGKVGIYNVGTGHGRSVKEFV-EACKSATGASI 372
DG+ +R Y+ D+ +A L K + G V YN+GT R V + + CK +
Sbjct: 217 GDGSNVRSYLYCEDVAEAFEVVLHKGEVGHV--YNIGTVKERRVIDVAKDICKLFGLDTE 274
Query: 373 KV-SFLTRRPGDYAEVYSDPSKIHDELNWTARYIDLRESLSTAWKWQKAHPNGYG 426
KV F+ RP + + D K+ +L W R + E L +W +P+ +G
Sbjct: 275 KVIRFVENRPFNDQRYFLDDQKLK-KLGWAERTL-WEEGLKKTIEWYTNNPDYWG 327
>Os02g0791500 Similar to Nucleotide sugar epimerase-like protein
(UDP-D-glucuronate 4- epimerase) (EC 5.1.3.6)
Length = 437
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 120/254 (47%), Gaps = 21/254 (8%)
Query: 89 VLVTGGAGYIGSHATLRLLRDNYRVTIVDNLSRGNMGAVRVLQRLFPEPGRLQFIYADLG 148
VLVTG AG++G+H +L L + V +DN + +++ +R + I D+
Sbjct: 99 VLVTGAAGFVGTHCSLALRKRGDGVVGIDNFNSYYDPSLKKARRSLLASHGVFVIEGDIN 158
Query: 149 DAKAVNKIFSENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLTVLEAMAAYNVK-TL 207
D + + K+F F V+H AA A V + P Y H+ + +T+LEA + + +
Sbjct: 159 DGRLLAKLFDVVPFTHVLHLAAQAGVRYAMENPASYVHSNIAGLVTLLEACKDADPQPAI 218
Query: 208 IYSSTCATYGEPDTMPITEAT-PQNPINPYGKAKKMAEDIILDFSKRSEMAVMILRYFNV 266
+++S+ + YG D +P TE+ P + Y KK E+I ++ +++ LR+F V
Sbjct: 219 VWASSSSVYGLNDKVPFTESDRTDQPASLYAATKKAGEEITHTYNHIYGLSITGLRFFTV 278
Query: 267 IGSDPGGRLGEAPRPELREHGRISGACFDAALGIIPGLKVRGTDYPTADGTCI-RDYIDV 325
G P G RP++ A F I+ G + T Y + + RD+ +
Sbjct: 279 YG--PWG------RPDM--------AYFSFTRNILQGKPI--TVYRGKNRVDLARDFTYI 320
Query: 326 TDLVDAHVKALDKA 339
D+V + +LD A
Sbjct: 321 DDIVKGCLGSLDTA 334
>Os08g0526100 NAD-dependent epimerase/dehydratase family protein
Length = 478
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/279 (28%), Positives = 124/279 (44%), Gaps = 36/279 (12%)
Query: 89 VLVTGGAGYIGSHATLRLLRDNYRVTIVDNL-SRGNMGAVRVLQRLFPEPGRLQFIYADL 147
VLVTG AG++G+H +L L V +DN S + R QRL G + + AD+
Sbjct: 126 VLVTGAAGFVGAHCSLALRARGDGVVGLDNFNSYYDPSLKRARQRLLASRG-VAVLDADI 184
Query: 148 GDAKAVNKIFSENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLTVLEAMAAYN--VK 205
DA + ++F F V+H AA A V + P Y + + ++V E A +
Sbjct: 185 NDAALLERLFDAARFTHVLHLAAQAGVRYAMRAPQTYVASNVAGLVSVFEVAAKHADPQP 244
Query: 206 TLIYSSTCATYGEPDTMPITEA-TPQNPINPYGKAKKMAEDIILDFSKRSEMAVMILRYF 264
++++S+ + YG P +E P + Y KK E I ++ +++ LR+F
Sbjct: 245 AIVWASSSSVYGLNTDAPFSEEHRTDRPASLYAATKKAGEAIAHAYNHIYGLSITGLRFF 304
Query: 265 NVIGSDPGGRLGEAPRPELREHGRISGACFDAALGIIPGLKVRGTDYPTADGT-CIRDYI 323
V G P G RP++ A F A I+ G + T + TADG RD+
Sbjct: 305 TVYG--PWG------RPDM--------AYFSFARSIVAGEPI--TLFRTADGADARRDFT 346
Query: 324 DVTDLVDAHVKALD------------KAQPGKVGIYNVG 350
+ D+V + ALD K P + +YN+G
Sbjct: 347 YIDDVVKGCLGALDTAGESTGTKSGKKRGPAPLRVYNLG 385
>Os03g0249500 Similar to Nucleotide sugar epimerase-like protein
(UDP-D-glucuronate 4- epimerase) (EC 5.1.3.6)
Length = 484
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 89/352 (25%), Positives = 149/352 (42%), Gaps = 46/352 (13%)
Query: 89 VLVTGGAGYIGSHATLRLLRDNYRVTIVDNLSRGNMGAVRVLQRLFPEPGRLQFIYADLG 148
VLVTG AG++G HA L R V +DN + A++ + + + D+
Sbjct: 121 VLVTGAAGFVGCHAAAALRRRGDGVLGLDNFNDYYDPALKRGRAALLARSGVYVVDGDIA 180
Query: 149 DAKAVNKIFSENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLTVLEAMAAYNVK-TL 207
DA+ + K+F F V+H AA A V + ++P+ Y + +LEA N + +
Sbjct: 181 DAELLAKLFDVVPFTHVLHLAAQAGVRHALVDPMSYVRANVGGFVALLEAARMANPQPAI 240
Query: 208 IYSSTCATYGEPDTMPITEATPQN-PINPYGKAKKMAEDIILDFSKRSEMAVMILRYFNV 266
+++S+ + YG +P +E + P + Y KK E+I ++ +++ LR+F V
Sbjct: 241 VWASSSSVYGLNSHVPFSEHDRTDRPASLYAATKKAGEEIAHAYNHIYGLSLTALRFFTV 300
Query: 267 IGSDPGGRLGEAPRPELREHGRISGACFDAALGIIPGLKVRGTDYPTADG-----TCIRD 321
G P G RP++ A F I+ G + T Y +A G T RD
Sbjct: 301 YG--PWG------RPDM--------AYFFFTRDILAGRPI--TVYESAGGGTHQTTISRD 342
Query: 322 YIDVTDLVDAHVKALD-----------KAQPGKVGIYNVGTGHGRSVKEFVEACKSATGA 370
+ + D+V V ALD K P YN+G V + V+ +
Sbjct: 343 FTYIDDIVKGCVGALDTAGRSTGSGGKKRGPAPFRTYNLGNTSPVPVTQLVDLLEKL--- 399
Query: 371 SIKVSFLTR-----RPGDYAEVYSDPSKIHDELNWTARYIDLRESLSTAWKW 417
+KV + + R GD +++ S EL + DL+ + +W
Sbjct: 400 -LKVKAVRKIVKMPRNGDVPYTHANISLAQRELGYRPS-TDLQTGVKKFVRW 449
>Os09g0504000 Similar to Nucleotide sugar epimerase-like protein
(UDP-D-glucuronate 4- epimerase) (EC 5.1.3.6)
Length = 498
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 81/280 (28%), Positives = 125/280 (44%), Gaps = 37/280 (13%)
Query: 89 VLVTGGAGYIGSHATLRLLRDNYRVTIVDNL-SRGNMGAVRVLQRLFPEPGRLQFIYADL 147
VLVTG AG++G+H +L L V +DN + + R QRL G L + AD+
Sbjct: 128 VLVTGAAGFVGTHCSLALRARGDGVLGLDNFNAYYDPELKRARQRLLAGRGVL-VLDADI 186
Query: 148 GDAKAVNKIFSENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLTVLEAMAAYN--VK 205
DA + K+F F V+H AA A V + P Y + + +TVLE A +
Sbjct: 187 NDALLLEKLFDLVPFTHVLHLAAQAGVRYAMEAPQTYVASNVAGLVTVLEVAAKHADPQP 246
Query: 206 TLIYSSTCATYGEPDTMPITEA-TPQNPINPYGKAKKMAEDIILDFSKRSEMAVMILRYF 264
++++S+ + YG P +E P + Y KK E I ++ +++ LR+F
Sbjct: 247 AIVWASSSSVYGLNTDAPFSEEHRTDRPASLYAATKKAGEAIAHTYNHIYGLSITGLRFF 306
Query: 265 NVIGSDPGGRLGEAPRPELREHGRISGACFDAALGIIPGLKVRGTDYPTADGT-CIRDYI 323
V G P G RP++ A F A I+ G + T + ADG RD+
Sbjct: 307 TVYG--PWG------RPDM--------AYFFFAKSIVSGEPI--TLFRAADGADARRDFT 348
Query: 324 DVTDLVDAHVKALD-------------KAQPGKVGIYNVG 350
+ D+V + ALD K+ P + +YN+G
Sbjct: 349 YIDDVVKGCLGALDTSGKSTGSSKSGKKSGPAPLRVYNLG 388
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.319 0.136 0.408
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 14,936,397
Number of extensions: 640807
Number of successful extensions: 1486
Number of sequences better than 1.0e-10: 13
Number of HSP's gapped: 1453
Number of HSP's successfully gapped: 13
Length of query: 428
Length of database: 17,035,801
Length adjustment: 104
Effective length of query: 324
Effective length of database: 11,605,545
Effective search space: 3760196580
Effective search space used: 3760196580
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 157 (65.1 bits)