BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os04g0587400 Os04g0587400|AK071680
(408 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os04g0587400 Protein of unknown function DUF250 domain cont... 732 0.0
Os02g0689200 Protein of unknown function DUF250 domain cont... 324 8e-89
Os04g0587300 Similar to Purine permease-like protein 318 6e-87
Os09g0548600 262 3e-70
Os09g0467400 Protein of unknown function DUF6, transmembran... 141 8e-34
Os09g0467300 Protein of unknown function DUF6, transmembran... 135 7e-32
Os03g0187800 Protein of unknown function DUF250 domain cont... 123 2e-28
Os01g0680200 Protein of unknown function DUF6, transmembran... 111 1e-24
Os01g0217100 Conserved hypothetical protein 96 4e-20
Os05g0556800 Protein of unknown function DUF250 domain cont... 94 2e-19
Os09g0467500 Protein of unknown function DUF6, transmembran... 86 4e-17
Os09g0334401 73 5e-13
>Os04g0587400 Protein of unknown function DUF250 domain containing protein
Length = 408
Score = 732 bits (1889), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 379/408 (92%), Positives = 379/408 (92%)
Query: 1 MTSTRPILLFILFLNLTMSDATEIQLQITGVRGQEDVVAESDKSTSRADGTXXXXXXXXP 60
MTSTRPILLFILFLNLTMSDATEIQLQITGVRGQEDVVAESDKSTSRADGT P
Sbjct: 1 MTSTRPILLFILFLNLTMSDATEIQLQITGVRGQEDVVAESDKSTSRADGTAAAAAAAAP 60
Query: 61 LPPVSSQRLRWWAVVLANIVFVLGGQSVATLLGRIYYDQGGGSLWLATVVQSCGAPLAVP 120
LPPVSSQRLRWWAVVLANIVFVLGGQSVATLLGRIYYDQGGGSLWLATVVQSCGAPLAVP
Sbjct: 61 LPPVSSQRLRWWAVVLANIVFVLGGQSVATLLGRIYYDQGGGSLWLATVVQSCGAPLAVP 120
Query: 121 LLLYFRRPEASPVARPPLLKIAAIYAGLGVLLAGDNLMYSYALLYLPLSTYSLVCATQLC 180
LLLYFRRPEASPVARPPLLKIAAIYAGLGVLLAGDNLMYSYALLYLPLSTYSLVCATQLC
Sbjct: 121 LLLYFRRPEASPVARPPLLKIAAIYAGLGVLLAGDNLMYSYALLYLPLSTYSLVCATQLC 180
Query: 181 FNAVFSYFLNKERFTALVLNSVVLLTFSAALVGVSHSSEETNSSVPEGKXXXXXXXXXXX 240
FNAVFSYFLNKERFTALVLNSVVLLTFSAALVGVSHSSEETNSSVPEGK
Sbjct: 181 FNAVFSYFLNKERFTALVLNSVVLLTFSAALVGVSHSSEETNSSVPEGKFALGFVLALSA 240
Query: 241 XXXXXXXXXXMQLTFDTVLRSNAAHAVLELQLWSNAAASCVSVAGLFISGEWSSLTAEMD 300
MQLTFDTVLRSNAAHAVLELQLWSNAAASCVSVAGLFISGEWSSLTAEMD
Sbjct: 241 SAAFALILSLMQLTFDTVLRSNAAHAVLELQLWSNAAASCVSVAGLFISGEWSSLTAEMD 300
Query: 301 GYKKGEVAYGMTLAWTAISWQLATMGMVGLVATVSSLFTNVISTVGMPLSPIMAVIFLGD 360
GYKKGEVAYGMTLAWTAISWQLATMGMVGLVATVSSLFTNVISTVGMPLSPIMAVIFLGD
Sbjct: 301 GYKKGEVAYGMTLAWTAISWQLATMGMVGLVATVSSLFTNVISTVGMPLSPIMAVIFLGD 360
Query: 361 RMDGAKVIAMLIGIWGFLSYVYQHYLDDAKSKNTAGSADVTQTSEAKL 408
RMDGAKVIAMLIGIWGFLSYVYQHYLDDAKSKNTAGSADVTQTSEAKL
Sbjct: 361 RMDGAKVIAMLIGIWGFLSYVYQHYLDDAKSKNTAGSADVTQTSEAKL 408
>Os02g0689200 Protein of unknown function DUF250 domain containing protein
Length = 382
Score = 324 bits (830), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 170/391 (43%), Positives = 243/391 (62%), Gaps = 17/391 (4%)
Query: 18 MSDATEIQLQITGVRGQEDVVAESDKSTSRADGTXXXXXXXXPLPPVSSQRLRWWAVVLA 77
MS+ + L IT +++V S K+ + + P+ + +WW +V
Sbjct: 1 MSNPCRVSLCIT--EEEDEVQPYSSKAATSST-------HEVPIQNSPVKSWQWWLMVGV 51
Query: 78 NIVFVLGGQSVATLLGRIYYDQGGGSLWLATVVQSCGAPLAVPLLLYFRRPEAS------ 131
N+ F++ GQ+ +TLLGR YY+QGG S W++T VQ+ G P+ L F +S
Sbjct: 52 NMFFLIAGQTASTLLGRFYYNQGGNSKWMSTFVQTAGFPILFIALFLFHSKTSSTQTVTS 111
Query: 132 -PVARPPLLKIAAIYAGLGVLLAGDNLMYSYALLYLPLSTYSLVCATQLCFNAVFSYFLN 190
P + KI IY LG+++A D+LMYSY LLYLP+STYSL+CA+QL FNAVFSYFLN
Sbjct: 112 SPAPTISIPKITLIYVVLGLIIAADDLMYSYGLLYLPVSTYSLICASQLAFNAVFSYFLN 171
Query: 191 KERFTALVLNSVVLLTFSAALVGVSHSSEETNSSVPEGKXXXXXXXXXXXXXXXXXXXXX 250
++FT L+ NSVVLLTFSA+L+GV S+ T +S+ GK
Sbjct: 172 AQKFTPLIFNSVVLLTFSASLLGVDEDSQGT-TSISHGKYILGFLLTLGASATYSLILSL 230
Query: 251 MQLTFDTVLRSNAAHAVLELQLWSNAAASCVSVAGLFISGEWSSLTAEMDGYKKGEVAYG 310
MQ+TF+ V++ VL +Q+++ A+ S+ GLF SGEW +L EM ++ G+++Y
Sbjct: 231 MQVTFEKVIKRETFSVVLNMQIYTALVATLASLVGLFASGEWMTLQGEMHAFQSGKLSYV 290
Query: 311 MTLAWTAISWQLATMGMVGLVATVSSLFTNVISTVGMPLSPIMAVIFLGDRMDGAKVIAM 370
MTL WTAISWQ+A++G+VGL+ VSSLF+NVIST+ +P+ P+ AVIF D+MDG K+IAM
Sbjct: 291 MTLLWTAISWQVASVGVVGLIFVVSSLFSNVISTLALPIIPVFAVIFFHDKMDGVKIIAM 350
Query: 371 LIGIWGFLSYVYQHYLDDAKSKNTAGSADVT 401
L+ IWGF+SY +Q Y+D K + T S + T
Sbjct: 351 LMAIWGFMSYGHQLYVDGKKGRKTTVSVEET 381
>Os04g0587300 Similar to Purine permease-like protein
Length = 376
Score = 318 bits (814), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 156/336 (46%), Positives = 219/336 (65%), Gaps = 2/336 (0%)
Query: 67 QRLRWWAVVLANIVFVLGGQSVATLLGRIYYDQGGGSLWLATVVQSCGAPLAVPLLLYFR 126
+ RWWA+V ++ F++ GQ+ ATLLGR YY QGG S W++ V++ G P+ L +F
Sbjct: 42 KPFRWWAMVAVDVFFLIAGQTSATLLGRYYYTQGGRSKWISAFVRTAGFPILFFTLFFFP 101
Query: 127 RPEASPVARPPLLKIAAIYAGLGVLLAGDNLMYSYALLYLPLSTYSLVCATQLCFNAVFS 186
S P+ K+A IY LG+++A D++MY+ L YLP STYSL+CA+QL FN VFS
Sbjct: 102 SKSPSSCTNTPMAKLAVIYIVLGLIIAADDMMYTGGLKYLPASTYSLICASQLAFNVVFS 161
Query: 187 YFLNKERFTALVLNSVVLLTFSAALVGVSHSSEETNSSVPEGKXXXXXXXXXXXXXXXXX 246
Y LN ++ T L+ NSVVLLT SA+L+GVS S+ + V GK
Sbjct: 162 YVLNSQKVTPLIFNSVVLLTMSASLIGVSKESQGV-TGVSGGKYLLGFVLTLGASCTYSL 220
Query: 247 XXXXMQLTFDTVLRSNAAHAVLELQLWSNAAASCVSVAGLFISGEWSSLTAEMDGYKKGE 306
MQLTF+T+++ + AVL +Q+++ A+ SV GLF SGEW SL EM+ ++ G+
Sbjct: 221 ILALMQLTFETIIKKHTFSAVLNMQIYTALVATAASVVGLFASGEWRSLRGEMNAFRSGQ 280
Query: 307 VAYGMTLAWTAISWQLATMGMVGLVATVSSLFTNVISTVGMPLSPIMAVIFLGDRMDGAK 366
+Y MTL W A+SWQ+A +G++GL+ VS+LF+NVISTV +P+ P AV+ DRM+G K
Sbjct: 281 FSYLMTLLWAAVSWQVANIGVLGLIFEVSALFSNVISTVSLPVIPFFAVVVFHDRMNGVK 340
Query: 367 VIAMLIGIWGFLSYVYQHYLDDAKSKNTAGSADVTQ 402
++AMLI IWGF+SY++QHYLD K+K A S D Q
Sbjct: 341 IVAMLIAIWGFISYLFQHYLDGKKAKK-ASSGDSAQ 375
>Os09g0548600
Length = 346
Score = 262 bits (670), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 147/328 (44%), Positives = 201/328 (61%), Gaps = 7/328 (2%)
Query: 76 LANIVFVLGGQSVATLLGRIYYDQGGGSLWLATVVQSCGAPL-AVPLLLYFRRPE-ASPV 133
+ +++ +L G+++A LL R+YY+ GG SLW+ T+ QS GAPL +P LL R P
Sbjct: 1 MVDMLMLLVGEAMAPLLTRLYYNSGGNSLWMVTLAQSAGAPLLVIPFLLTPRAAAVGEPR 60
Query: 134 ARPPLLKIAAIYAGLGVLLAGDNLMYSYALLYLPLSTYSLVCATQLCFNAVFSYFLNKER 193
P K+ AI LG+++ DNLMYSYA+LYLP+ST+SL+ ATQL FNAV S +N +R
Sbjct: 61 PAPAASKMVAICVALGLVVGCDNLMYSYAMLYLPVSTFSLLAATQLAFNAVTSRLINAQR 120
Query: 194 FTALVLNSVVLLTFSAALVGVSH-----SSEETNSSVPEGKXXXXXXXXXXXXXXXXXXX 248
FT LV+NSVV+LTFSAAL+GV +V GK
Sbjct: 121 FTPLVVNSVVVLTFSAALLGVDDPSSSVGGGAGGDAVQRGKHAAGVVLTLSASAVYALIL 180
Query: 249 XXMQLTFDTVLRSNAAHAVLELQLWSNAAASCVSVAGLFISGEWSSLTAEMDGYKKGEVA 308
+ TFD V+ + VL++Q+ +NA A+ VS LF SGEW ++ EM +K G+ A
Sbjct: 181 SLFEATFDKVIGAATPRWVLKMQISTNAVAATVSATALFASGEWRTIGGEMAAFKGGKAA 240
Query: 309 YGMTLAWTAISWQLATMGMVGLVATVSSLFTNVISTVGMPLSPIMAVIFLGDRMDGAKVI 368
Y T+ A+ WQ AT+G V L+A VSSLF NV T+ +P+ P++AV GD+M G KV+
Sbjct: 241 YAATVVGVAVGWQAATLGAVRLIARVSSLFANVTGTLALPMVPVLAVALFGDKMTGTKVV 300
Query: 369 AMLIGIWGFLSYVYQHYLDDAKSKNTAG 396
AML+ +WGFLSYVYQHYLD ++ G
Sbjct: 301 AMLMAVWGFLSYVYQHYLDGRRAAAREG 328
>Os09g0467400 Protein of unknown function DUF6, transmembrane domain containing
protein
Length = 361
Score = 141 bits (356), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 93/327 (28%), Positives = 164/327 (50%), Gaps = 9/327 (2%)
Query: 63 PVSSQRLRWWAVVLANIVFVLGGQSVATLLGRIYYDQGGGSLWLATVVQSCGAPLA-VPL 121
P + RW V L N ++ G + L+ R+Y+ +GG WL+ +Q+ G PL VP+
Sbjct: 17 PGRGRAARWLLVAL-NCGMLVVGTTGGPLISRLYFSKGGHRQWLSAWLQTAGWPLLLVPV 75
Query: 122 LLYFRRPEASPVARPPLL---KIAAIYAGLGVLLAGDNLMYSYALLYLPLSTYSLVCATQ 178
+ A P L ++ GLG L D+ +Y+Y L YLP+ST +++ +TQ
Sbjct: 76 AASYLSRRARDRRAPLFLTPTRVLLAGVGLGFLNGADDFIYAYGLAYLPVSTSAILISTQ 135
Query: 179 LCFNAVFSYFLNKERFTALVLNSVVLLTFSAALVGVSHSSEETNSSVPEGKXXXXXXXXX 238
L F F+ + ++RFTA LN+V LLT A ++G+ H+S++ + V GK
Sbjct: 136 LAFTVFFACLIVRQRFTAATLNAVALLTIGAVVLGL-HASKDRPAGVTSGKYWMGFFLTL 194
Query: 239 XXXXXXXXXXXXMQLTFDTVL---RSNAAHAVLELQLWSNAAASCVSVAGLFISGEWSSL 295
++L + R+ V+E+QL A+ G+ ++ ++ ++
Sbjct: 195 GAAALYGLILPLVELAYKHAAGGGRAVTYALVMEMQLVMGFFATAFCTVGMVVNKDFQAI 254
Query: 296 TAEMDGYKKGEVAYGMTLAWTAISWQLATMGMVGLVATVSSLFTNVISTVGMPLSPIMAV 355
E Y+ GE Y + L + A+ W+ +G VG++ V +L +I V +P++ ++ V
Sbjct: 255 PREAKQYELGEARYYVVLVFNAVLWEFFFVGAVGVIFCVHTLLAGIIIAVFIPITEVLGV 314
Query: 356 IFLGDRMDGAKVIAMLIGIWGFLSYVY 382
IFL ++ K +A+++ +WG SY Y
Sbjct: 315 IFLHEKFSSEKGVALVLSLWGLASYSY 341
>Os09g0467300 Protein of unknown function DUF6, transmembrane domain containing
protein
Length = 390
Score = 135 bits (339), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 98/347 (28%), Positives = 175/347 (50%), Gaps = 39/347 (11%)
Query: 64 VSSQRLRWWAVVLANIVFVLGGQSVATLLGRIYYDQGGGSLWLATVVQSCGAPLAV-PLL 122
+S+ RL +++ N V ++ G + LL R Y+ +GG WL++++Q+ G PL + PL
Sbjct: 29 LSTGRLFRSPLLVVNFVLMVVGSACGPLLLRAYFLRGGNRKWLSSLLQTAGWPLLLAPLC 88
Query: 123 LYFRRPEA---------------SPV--ARPPLLKIAAIYAGLGVLLAGDNLMYSYALLY 165
+ +P+ P LL +A+ +G++ D+L+Y+Y L Y
Sbjct: 89 FSYSSRRRRREVEDDGAGAGAAATPLFLMTPRLLVASAV---VGLMTGVDDLLYAYGLAY 145
Query: 166 LPLSTYSLVCATQLCFNAVFSYFLNKERFTALVLNSVVLLTFSAALVGVSHSSEETNSSV 225
LP+ST S++ +TQL F A F+ L ++RFTA +N+VVLL+ AA++G++ + + V
Sbjct: 146 LPVSTSSILISTQLAFTAAFALLLVRQRFTAFSVNAVVLLSVGAAMLGMNAGGDRP-AGV 204
Query: 226 PEGKXXXXXXXXXXXXXXXXXXXXXMQLTFDTVLRSNAAHA----------VLELQLWSN 275
+ M+L S A HA V+E+QL
Sbjct: 205 SRAQYCAGFAMTLAAAALYGLVLPVMEL-------SQAHHAAARGAVTYTLVMEMQLVIG 257
Query: 276 AAASCVSVAGLFISGEWSSLTAEMDGYKKGEVAYGMTLAWTAISWQLATMGMVGLVATVS 335
A+ S G+ ++ ++ ++ E + G+ Y + LA +A +Q +G +G + S
Sbjct: 258 FVATAFSAVGMLVNNDFHAIPGEAHEFGLGQAGYYLLLAGSAAMYQCFFLGTIGAIFYGS 317
Query: 336 SLFTNVISTVGMPLSPIMAVIFLGDRMDGAKVIAMLIGIWGFLSYVY 382
+L VI TV +P++ ++AV+F + +G K +A+ + +WGF+SY Y
Sbjct: 318 ALLAGVIMTVLIPVTEVLAVMFFHEPFNGTKGVALALSLWGFVSYFY 364
>Os03g0187800 Protein of unknown function DUF250 domain containing protein
Length = 399
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 105/300 (35%), Positives = 149/300 (49%), Gaps = 13/300 (4%)
Query: 94 RIYYDQGGGSLWLATVVQSCGAPLAVPLL---LYF-RRPEASPVARPPLLKIAAIYAGLG 149
R+Y+ GG LWL+ +Q G PL +P L LY RR + P L AA A LG
Sbjct: 68 RVYFVHGGTRLWLSATLQISGWPLLLPPLCVSLYRGRRHGIGNLLLPRRLVGAA--AVLG 125
Query: 150 VLLAGDNLMYSYALLYLPLSTYSLVCATQLCFNAVFSYFLNKERFTALVLNSVVLLTFSA 209
L A +Y+ LPLST SL+ ATQL F AVF++ RFT N+VVLLT
Sbjct: 126 GLYAVSCFVYALGSQALPLSTSSLLLATQLAFTAVFAFLFVGLRFTPFSANAVVLLTIGP 185
Query: 210 ALVGVSHSSEETNSSVPEGKXXXXXXXXXXXXXXXXXXXXXMQLTFDTVLRSNAAH---- 265
A++GV SS + T R+ A
Sbjct: 186 AVLGVGPSSGKPAGESSRAYWTGFCEAIGAAALAGLVIPLVEVATARYGRRTGPAARVPP 245
Query: 266 ---AVLELQLWSNAAASCVSVAGLFISGEWSSLTAEMDGYKKGEVAYGMTLAWTAISWQL 322
V+++Q AA + V V G+ I G++ ++ E + G Y + LAW A+SWQL
Sbjct: 246 PYATVMQMQAVMGAAGTAVCVLGMAIKGDFQAVAREAAAFGLGAANYYLVLAWDAVSWQL 305
Query: 323 ATMGMVGLVATVSSLFTNVISTVGMPLSPIMAVIFLGDRMDGAKVIAMLIGIWGFLSYVY 382
+G++GL+ SSL ++ V +PLS ++AVIFL ++ DG K IA+++ +WGF SY+Y
Sbjct: 306 LNLGIMGLITCASSLLAGIMIAVLLPLSQVLAVIFLHEKFDGTKGIALVLSLWGFASYLY 365
>Os01g0680200 Protein of unknown function DUF6, transmembrane domain containing
protein
Length = 387
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 103/320 (32%), Positives = 153/320 (47%), Gaps = 13/320 (4%)
Query: 76 LANIVFVLGGQSVATLLGRIYYDQGGGSLWLATVVQSCGAP-LAVPLLLYFRRPEASPVA 134
AN +LGG ++LL R Y+ GG + W+AT+VQS G P L VP+ Y R + P
Sbjct: 38 FANYAALLGGSVASSLLSRYYFAHGGHNRWVATLVQSVGFPFLLVPV--YAGRSPSQP-- 93
Query: 135 RPP---LLKIAAIYAGLGVLLAGDNLMYSYALLYLPLSTYSLVCATQLCFNAVFSYFLNK 191
RP ++ A +GVL+ +NL++SY+ YLP+ST SL+ +TQL F V + + +
Sbjct: 94 RPFAWFTRRLLAACVVIGVLMGVNNLLFSYSSSYLPVSTSSLLLSTQLAFTLVLAAIIVR 153
Query: 192 ERFTALVLNSVVLLTFSAALVGV-SHSSEETNSSVPEGKXXXXXXXXXXXXXXXXXXXXX 250
LN+VVLLT S+ L+ + S S E +
Sbjct: 154 HPLNFSNLNAVVLLTLSSVLIALRSSDSGEQPGGGSRARYFVGFAVTLGAAGLFAAYLPV 213
Query: 251 MQLTFDTVLRSNAAHAVLELQLWSNAAASCVSVAGLFISGEWSSLTAEMDGYKKGEVAYG 310
M+L + + AV E+Q+ AAA+ ++VAGL +G W E+ + AY
Sbjct: 214 MELVYRKAVSGGFRMAV-EVQVIMQAAATALAVAGLAAAGGWKE---ELARWDLSPAAYW 269
Query: 311 MTLAWTAISWQLATMGMVGLVATVSSLFTNVISTVGMPLSPIMAVIFLGDRMDGAKVIAM 370
LA +WQ MG G+V SSL + V T + + I V+ D K +A
Sbjct: 270 AVLAALVATWQACLMGTAGMVYLTSSLHSGVCMTAVLTANVIGGVVVFRDPFGADKAVAT 329
Query: 371 LIGIWGFLSYVYQHYLDDAK 390
++ +WGF SY+Y Y K
Sbjct: 330 VLCVWGFSSYLYGEYTTQKK 349
>Os01g0217100 Conserved hypothetical protein
Length = 183
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 68/108 (62%), Positives = 73/108 (67%), Gaps = 9/108 (8%)
Query: 35 EDVVAESDKSTSRADGTXXXXXXXXPLPPVSSQRLRWWAVVLANIVFVLGGQSVATLLGR 94
EDVVAESDK TSRAD T P VSS+RLRWWAVVLANIVFVLGGQSV
Sbjct: 48 EDVVAESDKGTSRADATAAAAAAPPP---VSSKRLRWWAVVLANIVFVLGGQSVGCFSAG 104
Query: 95 IYYDQGGGSLWLATVVQSCGAPLAV--PLLLYFRRPEASPVARPPLLK 140
+GG SLWLATVVQSCGAPL V LLLYF+ SP PPL++
Sbjct: 105 YTTIRGGDSLWLATVVQSCGAPLTVLLLLLLYFQM--GSPA--PPLIE 148
>Os05g0556800 Protein of unknown function DUF250 domain containing protein
Length = 394
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 94/329 (28%), Positives = 150/329 (45%), Gaps = 17/329 (5%)
Query: 68 RLRWWAVVLANIVFVLGGQSVATLLGRIYYDQGGGSLWLATVVQSCGAPLAVPLLLYFRR 127
R R +++AN +L G ++LL R Y+ GG + W+ T+VQS G PL V L R
Sbjct: 26 RRRRMLLLMANYAALLVGSVASSLLSRFYFTHGGRNRWVVTLVQSAGFPLLVAGALAGGR 85
Query: 128 PEASPVARPPL---LKIAAIYAGLGVLLAGDNLMYSYALLYLPLSTYSLVCATQLCFNAV 184
P ++P RP + A+ +G L+ +NL+++Y+ LP+ST SL+ +TQL F V
Sbjct: 86 PASAP--RPFTWLSRRFLAVCLVIGALMGANNLLFAYSTSLLPVSTSSLLLSTQLAFTLV 143
Query: 185 FSYFLNKERFTALVLNSVVLLTFSAALVGV-----SHSSEETNSSVPEGKXXXXXXXXXX 239
+ + + T + LN+VVLLT S+ L+ + ++E
Sbjct: 144 LAVVIVRHPVTFVNLNAVVLLTLSSVLLALRSGDSGETAEGGVGGGGRKSYLVGFVVTLG 203
Query: 240 XXXXXXXXXXXMQLTFDTVLRSNAAHAVLELQLWSNAAASCVSVAGLFISGEWSSLTAEM 299
M+L + + AV E+Q A AS ++ GL SG + ++
Sbjct: 204 AAGLFSAYLPVMELVYREAVSGGFVLAV-EVQAVMQAMASLIAAVGLAASG---GVADDV 259
Query: 300 DGYKKG---EVAYGMTLAWTAISWQLATMGMVGLVATVSSLFTNVISTVGMPLSPIMAVI 356
G+ G Y +A ++WQ MG G++ SSL + V + L+ + V
Sbjct: 260 SGWVDGGSSPAVYWAVVATLVLTWQACFMGTAGVIYLTSSLHSGVCMAAVLTLNVLGGVA 319
Query: 357 FLGDRMDGAKVIAMLIGIWGFLSYVYQHY 385
GD K +A + WGF SY+Y Y
Sbjct: 320 VFGDPFGAEKALATALCAWGFSSYLYGEY 348
>Os09g0467500 Protein of unknown function DUF6, transmembrane domain containing
protein
Length = 253
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 91/171 (53%), Gaps = 6/171 (3%)
Query: 63 PVSSQRLRWWAVVLANIVFVLGGQSVATLLGRIYYDQGGGSLWLATVVQSCGAPLA-VPL 121
P + RW V L N ++ G + L+ R+Y+ +GG WL+ +++ G PL VP+
Sbjct: 17 PGRGRAARWLLVAL-NCGMLMVGTTGGPLISRLYFSKGGHRQWLSAWLETAGWPLLLVPV 75
Query: 122 LLYFRRPEASPVARPPLL---KIAAIYAGLGVLLAGDNLMYSYALLYLPLSTYSLVCATQ 178
+ A P L ++ GLGVL D+ +Y+Y L YLP+ST +++ +T
Sbjct: 76 SASYLGRRARDRGAPLFLTPRRVLLACVGLGVLTGADDFIYAYGLDYLPVSTSAILTSTH 135
Query: 179 LCFNAVFSYFLNKERFTALVLNSVVLLTFSAALVGVSHSSEETNSSVPEGK 229
L F F+ + ++R TA LN+V LLT A ++G+ H S++ + V GK
Sbjct: 136 LAFTVFFACLIVRQRLTAATLNAVALLTIGAVVLGL-HVSKDRPAGVTNGK 185
>Os09g0334401
Length = 106
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 43/62 (69%), Positives = 45/62 (72%), Gaps = 6/62 (9%)
Query: 29 TGVRGQEDVVAESDKSTSRADGTXXXXXXXXPLPPVSSQRLRWWAVVLANIVFVLGGQSV 88
+GVRGQEDVVAE D TSRA PPVSS+RLRWWAVVLANIV VLGGQSV
Sbjct: 38 SGVRGQEDVVAECDMGTSRA------DATAAAPPPVSSKRLRWWAVVLANIVVVLGGQSV 91
Query: 89 AT 90
AT
Sbjct: 92 AT 93
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.321 0.133 0.391
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 12,156,826
Number of extensions: 464696
Number of successful extensions: 1022
Number of sequences better than 1.0e-10: 13
Number of HSP's gapped: 1003
Number of HSP's successfully gapped: 14
Length of query: 408
Length of database: 17,035,801
Length adjustment: 103
Effective length of query: 305
Effective length of database: 11,657,759
Effective search space: 3555616495
Effective search space used: 3555616495
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 157 (65.1 bits)