Os02g0689200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF250 domain containing protein.
FiT-DB / Search/ Help/ Sample detail
|
Os02g0689200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Protein of unknown function DUF250 domain containing protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 68.84 | 0.39 | 9.42 | -0.857 | 0.495 | 0.263 | 0.661 | 2.45 | -0.518 | 17.4 | 3.2 | 968 | -- | -- |
| 76.03 | 0.406 | 9.44 | -0.823 | 0.513 | 0.509 | 0.866 | -- | -0.461 | 16.9 | 1.881 | 1326 | -- | -- |
| 69.79 | 0.389 | 9.42 | -0.865 | 0.496 | 0.279 | -- | 2.58 | -0.516 | 17.5 | 3.3 | 1003 | -- | -- |
| 77.83 | 0.411 | 9.44 | -0.822 | 0.514 | 0.505 | -- | -- | -0.463 | 17.4 | 1.9 | 1313 | -- | -- |
| 82.14 | 0.422 | 9.41 | -0.902 | -- | 0.375 | -- | 2.81 | -0.525 | -- | 3.403 | 1041 | -- | -- |
| 78.64 | 0.416 | 9.47 | -0.703 | 0.509 | -- | 0.92 | -- | -0.559 | 16.8 | -- | -- | -- | -- |
| 80.61 | 0.42 | 9.47 | -0.701 | 0.523 | -- | -- | -- | -0.555 | 17.2 | -- | -- | -- | -- |
| 88.8 | 0.441 | 9.47 | -0.605 | -- | -0.3 | -- | -- | -0.586 | -- | 1.9 | 1313 | -- | -- |
| 88.2 | 0.437 | 9.42 | -- | 0.467 | -0.429 | -- | -- | -0.474 | 17.9 | 4.9 | 5760 | -- | -- |
| 94.9 | 0.455 | 9.46 | -0.719 | -- | -- | -- | -- | -0.568 | -- | -- | -- | -- | -- |
| 93.55 | 0.452 | 9.45 | -- | 0.535 | -- | -- | -- | -0.477 | 17.2 | -- | -- | -- | -- |
| 86.4 | 0.433 | 9.41 | -- | -- | -0.751 | -- | -- | -0.339 | -- | 9.388 | 47520 | -- | -- |
| 108.53 | 0.486 | 9.44 | -- | -- | -- | -- | -- | -0.488 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 63.09 | wind | 5 | 14400 | > th | dose independent | rect. | 18 | 2 |
| 2 | 63.24 | wind | 5 | 14400 | > th | dose dependent | rect. | 18 | 1 |
| 4 | 63.74 | wind | 5 | 14400 | < th | dose independent | rect. | 18 | 2 |
| 9 | 64.46 | wind | 9 | 14400 | > th | dose independent | rect. | 16 | 2 |
| 12 | 64.57 | wind | 7 | 43200 | > th | dose independent | rect. | 13 | 2 |
| 13 | 64.69 | atmosphere | 1000 | 14400 | > th | dose dependent | rect. | 8 | 1 |
| 25 | 64.79 | atmosphere | 1000 | 14400 | > th | dose dependent | rect. | 4 | 7 |
| 26 | 64.80 | atmosphere | 1000 | 14400 | > th | dose dependent | rect. | 19 | 2 |
| 28 | 64.80 | atmosphere | 1000 | 14400 | > th | dose dependent | rect. | 4 | 5 |
| 41 | 64.81 | atmosphere | 1000 | 14400 | > th | dose dependent | rect. | 18 | 16 |
| 45 | 64.82 | radiation | 20 | 14400 | > th | dose independent | rect. | 17 | 14 |
| 74 | 64.84 | wind | 7 | 43200 | < th | dose independent | rect. | 13 | 2 |
| 75 | 64.84 | atmosphere | 1000 | 14400 | > th | dose dependent | rect. | 4 | 1 |
| 92 | 64.85 | atmosphere | 1000 | 14400 | > th | dose dependent | sin | 9 | NA |
| 106 | 64.85 | atmosphere | 1000 | 14400 | > th | dose dependent | rect. | 18 | 11 |
| 110 | 64.85 | atmosphere | 1000 | 14400 | > th | dose dependent | rect. | 23 | 12 |
| 118 | 64.86 | atmosphere | 1000 | 14400 | > th | dose dependent | sin | 7 | NA |
| 169 | 64.88 | humidity | 90 | 14400 | > th | dose dependent | rect. | 2 | 4 |
| 193 | 64.89 | atmosphere | 1015 | 14400 | < th | dose dependent | rect. | 19 | 1 |
| 243 | 64.92 | atmosphere | 1000 | 14400 | > th | dose dependent | no | NA | NA |
| 255 | 64.92 | atmosphere | 1000 | 14400 | > th | dose dependent | rect. | 4 | 19 |
| 262 | 64.92 | atmosphere | 1000 | 14400 | > th | dose dependent | rect. | 1 | 22 |
| 271 | 64.92 | atmosphere | 1000 | 14400 | > th | dose dependent | rect. | 6 | 23 |
| 291 | 64.93 | atmosphere | 1000 | 14400 | > th | dose dependent | rect. | 6 | 18 |
| 311 | 64.93 | atmosphere | 1000 | 14400 | > th | dose dependent | rect. | 10 | 23 |
| 338 | 64.94 | atmosphere | 1000 | 14400 | > th | dose dependent | rect. | 8 | 21 |
| 405 | 64.97 | atmosphere | 1015 | 14400 | < th | dose dependent | rect. | 8 | 1 |
| 444 | 64.98 | atmosphere | 1015 | 14400 | < th | dose dependent | rect. | 8 | 3 |
| 471 | 64.99 | wind | 7 | 43200 | > th | dose dependent | rect. | 14 | 1 |
| 473 | 64.99 | atmosphere | 1015 | 14400 | < th | dose dependent | rect. | 10 | 1 |
| 617 | 65.06 | radiation | 20 | 14400 | > th | dose independent | rect. | 6 | 1 |
| 657 | 65.06 | atmosphere | 1015 | 14400 | < th | dose dependent | rect. | 18 | 17 |
| 664 | 65.07 | atmosphere | 1000 | 14400 | > th | dose dependent | rect. | 1 | 1 |
| 703 | 65.08 | wind | 7 | 43200 | > th | dose dependent | rect. | 13 | 4 |
| 799 | 65.10 | atmosphere | 1015 | 14400 | < th | dose dependent | rect. | 18 | 13 |
| 850 | 65.11 | atmosphere | 1015 | 14400 | < th | dose dependent | rect. | 6 | 16 |
| 859 | 65.11 | atmosphere | 1015 | 14400 | < th | dose dependent | rect. | 4 | 18 |
| 892 | 65.12 | atmosphere | 1015 | 14400 | < th | dose dependent | sin | 11 | NA |
| 984 | 65.13 | atmosphere | 1015 | 14400 | < th | dose dependent | sin | 7 | NA |
| 990 | 65.13 | atmosphere | 1015 | 14400 | < th | dose dependent | no | NA | NA |