Os05g0556800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF250 domain containing protein.
FiT-DB / Search/ Help/ Sample detail
|
Os05g0556800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Protein of unknown function DUF250 domain containing protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 38.25 | 0.288 | 3.01 | -0.0537 | 0.0754 | 1.01 | 0.21 | -2.65 | 0.00776 | 12.7 | 1015 | 10 | -- | -- |
| 41.91 | 0.304 | 3.01 | -0.0927 | 0.0692 | 0.945 | 0.419 | -- | 0.000402 | 13.3 | 1015 | 39 | -- | -- |
| 38.37 | 0.291 | 3.01 | -0.0453 | 0.0816 | 1.01 | -- | -2.77 | 0.00841 | 11.1 | 1015 | 13 | -- | -- |
| 42.51 | 0.306 | 3.01 | -0.0793 | 0.0811 | 0.949 | -- | -- | 0.00194 | 11 | 1015 | 13 | -- | -- |
| 38.78 | 0.292 | 3.01 | -0.0472 | -- | 0.968 | -- | -2.76 | 0.00729 | -- | 1015 | 21 | -- | -- |
| 45.35 | 0.316 | 3.01 | -0.0928 | 0.03 | -- | 0.455 | -- | -0.0113 | 14.3 | -- | -- | -- | -- |
| 46.01 | 0.318 | 3.01 | -0.0806 | 0.0509 | -- | -- | -- | -0.00915 | 10.5 | -- | -- | -- | -- |
| 42.67 | 0.304 | 3.01 | -0.0703 | -- | 0.894 | -- | -- | 0.00259 | -- | 1014 | 42 | -- | -- |
| 42.67 | 0.306 | 3.01 | -- | 0.0818 | 0.95 | -- | -- | 0.0108 | 11.1 | 1015 | 24 | -- | -- |
| 46.17 | 0.317 | 3.01 | -0.0815 | -- | -- | -- | -- | -0.00935 | -- | -- | -- | -- | -- |
| 46.18 | 0.318 | 3.01 | -- | 0.0515 | -- | -- | -- | -0.00017 | 10.6 | -- | -- | -- | -- |
| 42.78 | 0.305 | 3.01 | -- | -- | 0.912 | -- | -- | 0.0125 | -- | 1014 | 40 | -- | -- |
| 46.34 | 0.318 | 3.01 | -- | -- | -- | -- | -- | -0.00031 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 38.00 | atmosphere | 1015 | 10 | < th | dose independent | sin | 10 | NA |
| 5 | 38.00 | atmosphere | 1015 | 10 | < th | dose independent | sin | 22 | NA |
| 25 | 38.07 | temperature | 20 | 720 | < th | dose independent | rect. | 17 | 1 |
| 48 | 38.23 | atmosphere | 1015 | 720 | > th | dose dependent | rect. | 3 | 21 |
| 49 | 38.24 | atmosphere | 1015 | 720 | > th | dose independent | sin | 22 | NA |
| 52 | 38.25 | atmosphere | 1015 | 10 | > th | dose independent | sin | 7 | NA |
| 148 | 38.25 | atmosphere | 1015 | 10 | > th | dose independent | no | NA | NA |
| 152 | 38.25 | atmosphere | 1015 | 10 | < th | dose independent | no | NA | NA |
| 156 | 38.25 | atmosphere | 1015 | 270 | > th | dose independent | rect. | 20 | 1 |
| 163 | 38.25 | atmosphere | 1015 | 10 | > th | dose independent | rect. | 23 | 1 |