Os03g0187800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF250 domain containing protein.
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Os03g0187800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF250 domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 163.33 | 0.6 | 3.13 | -0.08 | 0.271 | 0.908 | -0.253 | 0.349 | -0.0246 | 5.06 | 80.14 | 1433 | -- | -- |
| 163.44 | 0.595 | 3.13 | -0.0528 | 0.271 | 0.926 | -0.257 | -- | -0.0189 | 5.09 | 80.12 | 1430 | -- | -- |
| 163.49 | 0.596 | 3.13 | -0.0798 | 0.268 | 0.917 | -- | 0.353 | -0.023 | 5.2 | 80.03 | 1436 | -- | -- |
| 163.6 | 0.596 | 3.13 | -0.0532 | 0.266 | 0.937 | -- | -- | -0.0163 | 5.2 | 80.06 | 1434 | -- | -- |
| 166.63 | 0.601 | 3.13 | -0.0766 | -- | 0.935 | -- | 0.372 | -0.0209 | -- | 80 | 1558 | -- | -- |
| 173.89 | 0.618 | 3.14 | -0.0696 | 0.248 | -- | -0.394 | -- | -0.0743 | 4.78 | -- | -- | -- | -- |
| 174.28 | 0.618 | 3.14 | -0.0677 | 0.247 | -- | -- | -- | -0.0723 | 5.01 | -- | -- | -- | -- |
| 166.74 | 0.601 | 3.13 | -0.037 | -- | 0.964 | -- | -- | -0.0172 | -- | 79.61 | 1533 | -- | -- |
| 163.67 | 0.596 | 3.13 | -- | 0.265 | 0.938 | -- | -- | -0.0114 | 5.24 | 80 | 1436 | -- | -- |
| 177.49 | 0.623 | 3.14 | -0.0587 | -- | -- | -- | -- | -0.066 | -- | -- | -- | -- | -- |
| 174.4 | 0.618 | 3.14 | -- | 0.246 | -- | -- | -- | -0.0647 | 5.02 | -- | -- | -- | -- |
| 166.78 | 0.601 | 3.13 | -- | -- | 0.966 | -- | -- | -0.013 | -- | 79.79 | 1533 | -- | -- |
| 177.58 | 0.622 | 3.14 | -- | -- | -- | -- | -- | -0.0594 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 153.41 | wind | 1.0 | 30 | < th | dose dependent | rect. | 2 | 3 |
| 3 | 153.81 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 20 | 1 |
| 7 | 154.52 | humidity | 50.0 | 4320 | > th | dose independent | rect. | 16 | 1 |
| 8 | 155.02 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 20 | 3 |
| 9 | 155.59 | wind | 1.0 | 30 | < th | dose independent | rect. | 3 | 1 |
| 10 | 155.76 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 21 | 1 |
| 14 | 156.31 | atmosphere | 1010.0 | 10 | > th | dose dependent | rect. | 12 | 1 |
| 129 | 156.98 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 20 | 10 |
| 130 | 156.99 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 20 | 4 |
| 132 | 157.02 | wind | 1.0 | 30 | < th | dose dependent | rect. | 17 | 11 |
| 134 | 157.04 | wind | 1.0 | 30 | < th | dose dependent | rect. | 23 | 5 |
| 140 | 157.11 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 20 | 6 |
| 154 | 157.31 | atmosphere | 1010.0 | 30 | > th | dose dependent | sin | 0 | NA |
| 380 | 157.55 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 8 | 2 |
| 382 | 157.55 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 8 | 2 |
| 394 | 157.63 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 8 | 17 |
| 421 | 157.78 | humidity | 70.0 | 4320 | < th | dose independent | rect. | 20 | 1 |
| 431 | 157.78 | humidity | 70.0 | 4320 | < th | dose dependent | rect. | 20 | 1 |
| 588 | 158.33 | radiation | 1.0 | 270 | < th | dose independent | rect. | 8 | 1 |
| 589 | 158.33 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 8 | 1 |
| 614 | 158.78 | humidity | 90.0 | 720 | < th | dose independent | rect. | 20 | 4 |
| 624 | 158.96 | wind | 1.0 | 30 | < th | dose independent | rect. | 17 | 11 |
| 626 | 158.98 | wind | 1.0 | 30 | < th | dose independent | rect. | 22 | 6 |
| 628 | 159.00 | humidity | 90.0 | 720 | > th | dose dependent | sin | 17 | NA |
| 636 | 159.04 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 7 | 10 |
| 638 | 159.07 | humidity | 50.0 | 4320 | < th | dose independent | rect. | 16 | 1 |
| 643 | 159.15 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 18 | 9 |
| 666 | 159.43 | wind | 1.0 | 720 | < th | dose independent | rect. | 3 | 1 |
| 706 | 159.75 | wind | 9.0 | 4320 | > th | dose dependent | rect. | 14 | 1 |
| 708 | 159.77 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 2 | 1 |
| 711 | 159.77 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 2 | 1 |
| 789 | 160.19 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 8 | 4 |
| 854 | 160.82 | humidity | 90.0 | 720 | > th | dose independent | rect. | 20 | 1 |
| 857 | 160.84 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 8 | 2 |
| 877 | 160.96 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 11 | 3 |
| 884 | 161.02 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 11 | 6 |
| 888 | 161.04 | humidity | 80.0 | 720 | > th | dose independent | rect. | 18 | 3 |
| 900 | 161.06 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 17 | 15 |
| 904 | 161.09 | humidity | 90.0 | 720 | > th | dose independent | rect. | 19 | 6 |
| 909 | 161.11 | humidity | 90.0 | 720 | > th | dose independent | rect. | 20 | 3 |
| 910 | 161.11 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 11 | 3 |
| 911 | 161.11 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 4 | 2 |
| 913 | 161.12 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 17 | 15 |
| 928 | 161.24 | humidity | 70.0 | 14400 | < th | dose dependent | rect. | 16 | 1 |
| 933 | 161.27 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 4 | 2 |
| 936 | 161.30 | humidity | 50.0 | 10 | > th | dose independent | sin | 7 | NA |
| 953 | 161.37 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 4 | 2 |
| 954 | 161.37 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 4 | 2 |
| 956 | 161.38 | atmosphere | 1010.0 | 10 | > th | dose independent | rect. | 10 | 2 |
| 960 | 161.38 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 17 | 6 |