BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os04g0359100 Os04g0359100|AK069384
(332 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os04g0359100 Alcohol dehydrogenase superfamily, zinc-contai... 630 0.0
Os04g0358000 DNA glycosylase family protein 501 e-142
Os04g0359700 Alcohol dehydrogenase superfamily, zinc-contai... 433 e-122
Os09g0502500 Alcohol dehydrogenase superfamily, zinc-contai... 313 9e-86
Os09g0503100 Similar to Quinone-oxidoreductase QR1 (Fragment) 308 4e-84
Os09g0503000 Alcohol dehydrogenase superfamily, zinc-contai... 132 4e-31
Os08g0379400 Similar to Quinone oxidoreductase-like protein 120 1e-27
AK061134 108 6e-24
Os04g0372700 Similar to Quinone-oxidoreductase QR1 (Fragment) 87 2e-17
Os02g0805600 Similar to Alcohol dehydrogenase, zinc-containing 80 2e-15
Os01g0753100 Alcohol dehydrogenase superfamily, zinc-contai... 78 1e-14
AK063662 77 2e-14
AK109117 76 4e-14
AK060364 76 4e-14
Os09g0459800 Similar to ARP protein 71 1e-12
>Os04g0359100 Alcohol dehydrogenase superfamily, zinc-containing protein
Length = 332
Score = 630 bits (1626), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 315/332 (94%), Positives = 315/332 (94%)
Query: 1 MAAGERPATMRAVQYSGYGGGAAALKFVEIPVPSVKKDEVLVKVEAASINQSDLMTQKGM 60
MAAGERPATMRAVQYSGYGGGAAALKFVEIPVPSVKKDEVLVKVEAASINQSDLMTQKGM
Sbjct: 1 MAAGERPATMRAVQYSGYGGGAAALKFVEIPVPSVKKDEVLVKVEAASINQSDLMTQKGM 60
Query: 61 MRPFHPKFPFIPVNNVSGEIVEVGSAVREFKVGDKVVSKLDFWTAGGLAEYVATSDKLTV 120
MRPFHPKFPFIPVNNVSGEIVEVGSAVREFKVGDKVVSKLDFWTAGGLAEYVATSDKLTV
Sbjct: 61 MRPFHPKFPFIPVNNVSGEIVEVGSAVREFKVGDKVVSKLDFWTAGGLAEYVATSDKLTV 120
Query: 121 ARPAGISAADAAGVPVAGLTALQALKAIGTKFDGSGTSGGADVLITAASSGVGTYAVQLA 180
ARPAGISAADAAGVPVAGLTALQALKAIGTKFDGSGTSGGADVLITAASSGVGTYAVQLA
Sbjct: 121 ARPAGISAADAAGVPVAGLTALQALKAIGTKFDGSGTSGGADVLITAASSGVGTYAVQLA 180
Query: 181 KLGNHRVTATCGARNLGLVAGLGADEVLDYKTPEGAALSSPSGKKYDYIVNISNKNKWSV 240
KLGNHRVTATCGARNLGLVAGLGADEVLDYKTPEGAALSSPSGKKYDYIVNISNKNKWSV
Sbjct: 181 KLGNHRVTATCGARNLGLVAGLGADEVLDYKTPEGAALSSPSGKKYDYIVNISNKNKWSV 240
Query: 241 FKPRLSSHGRVVDVAPNFGNFVASVVTXXXXXXXXXXXXXXXXXEDLGLLLELMREGKLR 300
FKPRLSSHGRVVDVAPNFGNFVASVVT EDLGLLLELMREGKLR
Sbjct: 241 FKPRLSSHGRVVDVAPNFGNFVASVVTLFSRRKKLSLVSLKMSKEDLGLLLELMREGKLR 300
Query: 301 TVVDSRHPFEKAADAWARSLSGHATGKVIVEM 332
TVVDSRHPFEKAADAWARSLSGHATGKVIVEM
Sbjct: 301 TVVDSRHPFEKAADAWARSLSGHATGKVIVEM 332
>Os04g0358000 DNA glycosylase family protein
Length = 1310
Score = 501 bits (1291), Expect = e-142, Method: Compositional matrix adjust.
Identities = 255/333 (76%), Positives = 290/333 (87%), Gaps = 3/333 (0%)
Query: 1 MAAGERPATMRAVQYSGYGGGAAALKFVEIPVPSVKKDEVLVKVEAASINQSDLMTQKGM 60
MAAG RPATMRAVQY GYGGGAA LKFVEIPVPS+KK+E+L+K+EAAS+NQ+D QKG+
Sbjct: 980 MAAGGRPATMRAVQYGGYGGGAATLKFVEIPVPSLKKNEILIKIEAASLNQADWRIQKGL 1039
Query: 61 MRPFHPKFPFIPVNNVSGEIVEVGSAVREFKVGDKVVSKLDFWTAGGLAEYVATSDKLTV 120
MRPFHPKFPFIPV +VSGE++EVGSA+ EFKVGDKVVSKL+ W AGGLAEYVA S+ TV
Sbjct: 1040 MRPFHPKFPFIPVTDVSGEVIEVGSAIHEFKVGDKVVSKLNLWKAGGLAEYVAASESDTV 1099
Query: 121 ARPAGISAADAAGVPVAGLTALQALKAIGTKFDGSGTSGGADVLITAASSGVGTYAVQLA 180
+RPAGISAADAAG+PVAGLTALQAL +IGTKFDGSGT GADVLITAASSGVGTYAVQLA
Sbjct: 1100 SRPAGISAADAAGLPVAGLTALQALSSIGTKFDGSGT--GADVLITAASSGVGTYAVQLA 1157
Query: 181 KLGNHRVTATCGARNLGLVAGLGADEVLDYKTPEGAALSSPSGKKYDYIVNISNKNKWSV 240
KLGNHRVT TCGARNL LV LGADEVLDY TPEGAAL+SPSG+KYDYI+N++++ KWSV
Sbjct: 1158 KLGNHRVTTTCGARNLDLVGSLGADEVLDYATPEGAALASPSGRKYDYIINLTDRGKWSV 1217
Query: 241 FKPRLSSH-GRVVDVAPNFGNFVASVVTXXXXXXXXXXXXXXXXXEDLGLLLELMREGKL 299
F+P+LSS+ GRVVDV+PN GNF+ASV+T ++LG LLELMREGKL
Sbjct: 1218 FRPQLSSNGGRVVDVSPNLGNFLASVMTLFSRRKRLSLVILTLGKKELGFLLELMREGKL 1277
Query: 300 RTVVDSRHPFEKAADAWARSLSGHATGKVIVEM 332
+TVVDSRHPFEKAA+AW RS+SGHATGKVIVEM
Sbjct: 1278 KTVVDSRHPFEKAAEAWERSMSGHATGKVIVEM 1310
>Os04g0359700 Alcohol dehydrogenase superfamily, zinc-containing protein
Length = 396
Score = 433 bits (1114), Expect = e-122, Method: Compositional matrix adjust.
Identities = 231/332 (69%), Positives = 264/332 (79%), Gaps = 2/332 (0%)
Query: 2 AAGERPATMRAVQYSGYGGGAAALKFVEIPVPSVKKDEVLVKVEAASINQSDLMTQKGMM 61
A G PATMRAVQY+GYGGGA ALK VEIPVPSVKK EVL+KVEAAS+N D QKGM+
Sbjct: 66 AGGGIPATMRAVQYTGYGGGAGALKHVEIPVPSVKKHEVLIKVEAASVNPIDWSIQKGML 125
Query: 62 RPFHPKFPFIPVNNVSGEIVEVGSAVREFKVGDKVVSKLDFWTAGGLAEYVATSDKLTVA 121
RPF PKFPFIPV +V+GEIVE GSAV E KVGDKV+SKL+FW GGLAEYVA + LTV
Sbjct: 126 RPFLPKFPFIPVTDVAGEIVEAGSAVHELKVGDKVLSKLNFWKGGGLAEYVAAPESLTVV 185
Query: 122 RPAGISAADAAGVPVAGLTALQALKAIGTKFDGSGTSGGADVLITAASSGVGTYAVQLAK 181
RPAG+SA DAAG+PVAGLTAL+AL +IGTKFDG+G + GA+VLITAAS GVGTYAVQLAK
Sbjct: 186 RPAGVSAVDAAGLPVAGLTALKALMSIGTKFDGTGGT-GANVLITAASGGVGTYAVQLAK 244
Query: 182 LGNHRVTATCGARNLGLVAGLGADEVLDYKTPEGAAL-SSPSGKKYDYIVNISNKNKWSV 240
LGNHRVTATCGARN+ LV LGADEVLDY TP+GAAL SS S +KYDYI+N + WS
Sbjct: 245 LGNHRVTATCGARNMDLVRSLGADEVLDYNTPQGAALTSSASDEKYDYIINTAMNVNWSA 304
Query: 241 FKPRLSSHGRVVDVAPNFGNFVASVVTXXXXXXXXXXXXXXXXXEDLGLLLELMREGKLR 300
KP LSS GRVVD+ PN GN+VA+++T E++ L+EL+ EGKLR
Sbjct: 305 MKPTLSSRGRVVDITPNPGNYVAAMLTMFARKKITMMALMSLGKEEMRFLMELVGEGKLR 364
Query: 301 TVVDSRHPFEKAADAWARSLSGHATGKVIVEM 332
TVVDSR PFEKAA+AW +S+ GHATGKVIVEM
Sbjct: 365 TVVDSRCPFEKAAEAWEKSMGGHATGKVIVEM 396
>Os09g0502500 Alcohol dehydrogenase superfamily, zinc-containing protein
Length = 340
Score = 313 bits (803), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 173/330 (52%), Positives = 217/330 (65%), Gaps = 8/330 (2%)
Query: 10 MRAVQYSGYGGGAAALKFVEIPVPSVKKDEVLVKVEAASINQSDLMTQKGMMRPFHP-KF 68
MRAVQY YGGGA ALK VE+P+P+ KK EVL+K+EA SINQ D QKG+ RPF P KF
Sbjct: 8 MRAVQYDKYGGGAQALKHVEVPIPTPKKGEVLIKMEAGSINQVDWKFQKGVARPFMPNKF 67
Query: 69 PFIPVNNVSGEIVEVGSAVREFKVGDKVVSKLDFWTAGGLAEYVATSDKLTVARPAGISA 128
PFIPV +++GE+VE+G V FKVGDKV++ ++F GGLAEY T RP +SA
Sbjct: 68 PFIPVYDLAGEVVELGRGVSSFKVGDKVIA-INFPGGGGLAEYAVAQASRTAPRPPEVSA 126
Query: 129 ADAAGVPVAGLTALQALKAIGTKFDGSGTSGGA---DVLITAASSGVGTYAVQLAKLGNH 185
A A +P+A +TAL AL+ G D GG +VL+TAAS GVG +AVQLA H
Sbjct: 127 AVGACLPIAAVTALVALRTAGVSLDAGDGGGGGAKKNVLVTAASGGVGHFAVQLASAAGH 186
Query: 186 RVTATCGARNLGLVAGLGADEVLDYKTPEGAALSSPSGKKYDYIVNISNKN--KWSVFKP 243
RVTATCGARN GLV GLGAD+VLDY TPEGAAL SPSG++YD +V+ + WS F P
Sbjct: 187 RVTATCGARNAGLVGGLGADKVLDYATPEGAALRSPSGRRYDAVVHCAAVAGLPWSAFAP 246
Query: 244 RLSSHGRVVDVAPNFGNFVASVVTXXX-XXXXXXXXXXXXXXEDLGLLLELMREGKLRTV 302
L+ G VVD+ P F ++ ED+ L+ ++ EGKLR V
Sbjct: 247 VLADAGVVVDLTPGAAAFATALRQRVTFSRKRLVPLFVSPTKEDMELVAGMVAEGKLRAV 306
Query: 303 VDSRHPFEKAADAWARSLSGHATGKVIVEM 332
++SRHP +A + WARS++GHATGK+IVEM
Sbjct: 307 IESRHPLSRAEEGWARSMAGHATGKIIVEM 336
>Os09g0503100 Similar to Quinone-oxidoreductase QR1 (Fragment)
Length = 346
Score = 308 bits (789), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 171/335 (51%), Positives = 220/335 (65%), Gaps = 10/335 (2%)
Query: 7 PATMRAVQYSGYGGGAAALKFVEIPVPSVKKDEVLVKVEAASINQSDLMTQKGMMRPFHP 66
P TMRAVQY YGGG LK VE+P+P+ K+ E+L+K+EAASIN D QKGM+R F P
Sbjct: 9 PKTMRAVQYDKYGGGPEGLKHVEVPIPAPKEGELLIKMEAASINPIDWKIQKGMLRLFLP 68
Query: 67 -KFPFIPVNNVSGEIVEVGSAVREFKVGDKVVSKLDFWTAGGLAEYVATSDKLTVARPAG 125
KFPFIPV ++SGE+VE+G V FK GDKVVS + F GGLAEY LTVARP
Sbjct: 69 KKFPFIPVGDLSGEVVELGGGVSGFKPGDKVVS-MSFPNCGGLAEYAVAPASLTVARPPE 127
Query: 126 ISAADAAGVPVAGLTALQALKAIGTKFDGSGTS-----GGADVLITAASSGVGTYAVQLA 180
+SAAD A +P A +ALQ LKA G +FD + G +VL+TAAS GVG YAVQLA
Sbjct: 128 VSAADGATLPAAAGSALQQLKAAGVRFDADADAAAAAGGPKNVLVTAASGGVGHYAVQLA 187
Query: 181 KLGNHRVTATCGARNLGLVA-GLGADEVLDYKTPEGAALSSPSGKKYDYIVNISNKNKWS 239
KL VTATCGARNL V GLGADE LDY+TP+GAAL SPSG++YD + + + W
Sbjct: 188 KLAGLHVTATCGARNLAFVRDGLGADEALDYRTPDGAALRSPSGRRYDAVAHCAPPAPWP 247
Query: 240 VFKPRLS-SHGRVVDVAPNFGNFVASVVTXXX-XXXXXXXXXXXXXXEDLGLLLELMREG 297
VF+ L+ + G VVD+ P V S + E++ L+++ ++G
Sbjct: 248 VFRDALADAGGVVVDLTPGVAATVRSFLHRVTFSKKRLVPLILMPKKEEMEWLVDMAKQG 307
Query: 298 KLRTVVDSRHPFEKAADAWARSLSGHATGKVIVEM 332
KL+T +DS++P +A +AWA+S+ GHATGK++VEM
Sbjct: 308 KLKTTIDSKYPLSRAQEAWAKSMEGHATGKIVVEM 342
>Os09g0503000 Alcohol dehydrogenase superfamily, zinc-containing protein
Length = 164
Score = 132 bits (332), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 78/172 (45%), Positives = 102/172 (59%), Gaps = 17/172 (9%)
Query: 166 TAASSGVGTYAVQLAKLGNHRVTATCGARNLGLVAG-LGADEVLDYKTPEGAALSSPSGK 224
TAAS GVG +AVQLA+LG HRVTATCGARNL LVAG LGADE LDY TP+GAAL SPSG+
Sbjct: 1 TAASGGVGHFAVQLARLGGHRVTATCGARNLALVAGELGADEALDYATPDGAALRSPSGR 60
Query: 225 KYDYIVNISNKNKWSVFKPRLS---SHGRVVDVAPNFGNFVASVVTXXXXXXXXXXXXXX 281
+YD +V+ + W VF L+ + G VVD+ P+ +++
Sbjct: 61 RYDAVVHCAPHLPWQVFDRVLAEGDTGGVVVDITPSPAALATALLHRVTFSKKRLTPFMF 120
Query: 282 XXXE-DLGLLLELMREGKLRTVVDSRHPFEKAADAWARSLSGHATGKVIVEM 332
+ D+ LL+ + R+GKL+ VDS HP ATGKV+V++
Sbjct: 121 SPSKADMELLVAMARQGKLKPAVDSCHPLSD------------ATGKVVVKI 160
>Os08g0379400 Similar to Quinone oxidoreductase-like protein
Length = 390
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 108/343 (31%), Positives = 159/343 (46%), Gaps = 46/343 (13%)
Query: 3 AGERPATMRAVQYSGYGGGAAALKFVEIPVPSVKKDEVLVKVEAASINQSDLMTQKGMMR 62
AGE PATM+A Y YG G+ VP + D+VLV+V AA++N D + G +
Sbjct: 75 AGEVPATMKAWAYDDYGDGSVLKLNDAAAVPDIADDQVLVRVAAAALNPVDAKRRAGKFK 134
Query: 63 PFHPKFPFIPVNNVSGEIVEVGSAVREFKVGDKVVSKLDF------WTAGGLAEYVATSD 116
P +P +V+G +V+ G V+ K GD+V + +G LAEY A +
Sbjct: 135 ATDSPLPTVPGYDVAGVVVKAGRKVKGLKEGDEVYGNISEKALEGPKQSGSLAEYTAVEE 194
Query: 117 KLTVARPAGISAADAAGVPVAGLTALQALKAIGTKFDGSGTSGGADVLITAASSGVGTYA 176
KL +P + A AAG+P+A TA + L + +G S G +LI + GVG+ A
Sbjct: 195 KLLALKPKSLGFAQAAGLPLAIETAHEGL-------ERAGFSAGKSILILGGAGGVGSLA 247
Query: 177 VQLAK--LGNHRVTATCGARNLGLVAGLGADEVLDYKTPEGAALSSPSGKKYDYIVNISN 234
+QLAK G +V AT L L+ LGAD +DY L KYD +++
Sbjct: 248 IQLAKHVYGASKVAATASTPKLELLKSLGADVAIDYTKENFEDLPD----KYDVVLDAVG 303
Query: 235 KNKWSVFKPRLSSHGRVV-----DVAPNFGNFVASVVTXXXXXXXXXXXXXXXXXEDLGL 289
+ + +V + G VV V P F V S E L
Sbjct: 304 QGEKAV--KVVKEGGSVVVLTGAVVPPGFRFVVTS---------------DGSVLEKLNP 346
Query: 290 LLELMREGKLRTVVDSRHP--FEKAADAWARSLSGHATGKVIV 330
LE GK++ +VD + P F + +A++ +G ATGKV++
Sbjct: 347 YLE---SGKVKPLVDPKGPFAFSQVVEAFSYLETGRATGKVVI 386
>AK061134
Length = 329
Score = 108 bits (270), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 98/343 (28%), Positives = 147/343 (42%), Gaps = 39/343 (11%)
Query: 7 PATMRAVQYSGYGGGAAAL---KFVEIPVPSVKKDEVLVKVEAASINQSDLMTQKGMMRP 63
P T +A Y+ YG L + + P+PS V VKV +AS+N D ++
Sbjct: 6 PETFKAYTYARYGPLEDVLECSQLTQQPLPS--PSHVRVKVYSASLNPIDYK----VVET 59
Query: 64 FHPKF---------PFIPVNNVSGEIVEVGSAVREFKVGDKVVSKLDFWTAGGLAEYVAT 114
+ K+ PF + +GE+VEVG+ FKVGD V K AG L E++ T
Sbjct: 60 YGAKYTGGTPTQESPFRIGFDFAGEVVEVGAEATAFKVGDAVYGKAARDAAGSLGEFLVT 119
Query: 115 SDKLTVARPAGISAADAAGVPVAGLTALQALKAIGTKFDGSGTSGGADVLITAASSGVGT 174
+L +P + AAGVP LT+ QAL+ + + G VL+ SS G
Sbjct: 120 HAELLAHKPTTVDFDHAAGVPGVALTSYQALR------EHAKLQPGERVLVLGGSSSTGI 173
Query: 175 YAVQLAKLGNHRVTATCGARNLGLVAGLGADEVLDYKTPEGAALSSPSGKKYDYIVNISN 234
+ +Q AK V AT +N+ V LG D+V+DY+T + + L Y +
Sbjct: 174 FGIQYAKALGAFVVATTSTKNVAFVQALGTDDVIDYRTQQWSKLVEAHSIDVVYDCGV-E 232
Query: 235 KNKWS-----VFKPRLSSHGRVVDVAPNFGNFVASVVTXXXXXXXXXXXXXXXXXEDLGL 289
W V K GR V + + + +DL
Sbjct: 233 PTSWEDGAQHVLK---KDTGRFVTLRRGLPH------SDAKFGATYSAPFARPSGQDLAA 283
Query: 290 LLELMREGKLRTVVDSRHPFEKAADAWARSLSGHATGKVIVEM 332
+ L+ GK++ +DS P E +A+AR + A GKVIV++
Sbjct: 284 IATLIDAGKIKLFIDSVFPLESTREAFARLKTERAVGKVIVQV 326
>Os04g0372700 Similar to Quinone-oxidoreductase QR1 (Fragment)
Length = 129
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/101 (55%), Positives = 69/101 (68%), Gaps = 1/101 (0%)
Query: 2 AAGERPATMRAVQYSGYGGGAAALKFVEIPVPSVKKDEVLVKVEAASINQSDLMTQKGM- 60
AA PA MRAVQY GGGAA LK VE+PVPS KK+EVL+K+EAA+IN D QKGM
Sbjct: 4 AAATPPAMMRAVQYDASGGGAAGLKHVEVPVPSAKKNEVLLKLEAATINPVDWKIQKGML 63
Query: 61 MRPFHPKFPFIPVNNVSGEIVEVGSAVREFKVGDKVVSKLD 101
+ PFIPV +V+G + VG V +F VGD+VV+ L+
Sbjct: 64 RPLLPRRLPFIPVTDVAGVVAGVGPGVNDFAVGDQVVAMLN 104
>Os02g0805600 Similar to Alcohol dehydrogenase, zinc-containing
Length = 328
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/204 (34%), Positives = 100/204 (49%), Gaps = 14/204 (6%)
Query: 32 VPSVKKDEVLVKVEAASINQSDLMTQKGMMRPFHPKFPFIPVNNVSGEIVEVGSAV-REF 90
+P + EVLV V AA +N++D + ++G P P P SG I+ +G V +
Sbjct: 24 LPPPGEGEVLVGVSAAGVNRADTVQRQGRY-PAPPGASPYPGLECSGTILALGPNVPSRW 82
Query: 91 KVGDKVVSKLDFWTAGGLAEYVATSDKLTVARPAGISAADAAGVPVAGLTALQALKAIGT 150
VGD+V + L ++GG AE V + P G+S DAAG+P T T
Sbjct: 83 AVGDQVCALL---SSGGYAEKVVVPAGQLLPVPEGVSLTDAAGLPEVACTVWS------T 133
Query: 151 KFDGSGTSGGADVLITAASSGVGTYAVQLAKLGNHRVTATCGARN-LGLVAGLGADEVLD 209
F S S LI SSG+GT+A+Q+AK +V T G+ L GLGAD ++
Sbjct: 134 VFVTSHLSPSESFLIHGGSSGIGTFAIQIAKHLGIKVFVTAGSEEKLAACKGLGADVCIN 193
Query: 210 YKTPEGAAL--SSPSGKKYDYIVN 231
YKT + A +GK D I++
Sbjct: 194 YKTEDFVARVKEETNGKGVDVILD 217
>Os01g0753100 Alcohol dehydrogenase superfamily, zinc-containing protein
Length = 365
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/204 (33%), Positives = 101/204 (49%), Gaps = 8/204 (3%)
Query: 9 TMRAVQYSGYGGGAAALKFVEIPVPSVKKDEVLVKVEAASINQSDLMTQKGMMRP-FHPK 67
+ RAV +GG +PVP +K +VLV+ A SIN DL + G R F P
Sbjct: 29 SCRAVVVPRFGGPEVLEVRQGVPVPDLKPGDVLVRARAVSINPLDLRMRSGYGRSIFEPV 88
Query: 68 FPFIPVNNVSGEIVEVGSAVREFKVGDKVVSKLD-FWTAGGLAEYVATSDKLTVARPAGI 126
P I ++SGE+ G++V F +G +V L G +Y S ++P+ +
Sbjct: 89 LPLIIGRDISGEVAATGTSVSSFTIGQEVFGALHPTAIRGTYTDYAILSQDELTSKPSTL 148
Query: 127 SAADAAGVPVAGLTALQALKAIGTKFDGSGTSGGADVLITAASSGVGTYAVQLAKLGNHR 186
S +A+ +P A LTA +AL GT + S G VL+ VG AVQLA
Sbjct: 149 SHVEASAIPFAALTAWRALH--GT----ARISEGQRVLVIGGGGAVGLAAVQLAVAAGCS 202
Query: 187 VTATCGARNLGLVAGLGADEVLDY 210
V+ATCG +++ V GA++ +DY
Sbjct: 203 VSATCGTKSIEQVLAAGAEKAIDY 226
>AK063662
Length = 374
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/209 (34%), Positives = 99/209 (47%), Gaps = 20/209 (9%)
Query: 7 PATMRAVQYSGYGGGAAALKF-VEIPVPSVKKDEVLVKVEAASINQSDLMTQKGMMRPFH 65
P TM+AV Y GG L++ ++PVP ++ EVLVK + IN D + G+ +P
Sbjct: 46 PKTMKAV-YIEKTGGTDVLQYKTDVPVPEPQEGEVLVKNDFIGINYIDTYFRSGVYKP-- 102
Query: 66 PKFPFIPVNNVSGEIVEVGSAV-REFKVGDKVVSKLDFWTAGGLAEYVATSDKLTVARPA 124
PKFP+I +G I VG V + VG +V + AEYV + T+ P
Sbjct: 103 PKFPYILGREGAGTIAAVGPNVPSDLTVGTRV----GYMGQYAYAEYVPVAATYTIPLPD 158
Query: 125 GISAADAAGVPVAGLTALQALKAIGTKFDGSGTSGGADVLITAASSGVGTYAVQLAKLGN 184
I + AA + LQAL AI D G +L+TAA+ GVG + QL +
Sbjct: 159 SIDSKTAAA------SILQALTAITLIRDAYPVQKGDWILVTAAAGGVGLWLCQLLRAIG 212
Query: 185 HRVTATCGA---RNLGLVAGLGADEVLDY 210
RV A+ RNL GA+ VL Y
Sbjct: 213 ARVIASASTEEKRNLA--KENGAEFVLGY 239
>AK109117
Length = 493
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/171 (34%), Positives = 89/171 (52%), Gaps = 15/171 (8%)
Query: 16 SGYGGGAAALKFVEIPVPSV-----KKDEVLVKVEAASINQSDLMTQKGMMRPFHPKFPF 70
+G G + LK + P+V K++ + V+V+AA +N ++LM ++G+ RP + K P+
Sbjct: 39 TGSGSDYSNLKLKDEDYPTVEGVAGKEEFISVRVKAAGLNFAELMQRQGLYRPSN-KCPY 97
Query: 71 IPVNNVSGEIVEVGSAVREFKVGDKVVSKLDFWTAGGLAEYVATSDKLTVARPAGISAAD 130
P +G + +VGSAV +FKV D+V+ F +G + V + K + P +S D
Sbjct: 98 TPGFEAAGIVEQVGSAVTDFKVDDRVIV---FNGSGMWKDVVTVTQKNAIKMPDNMSFED 154
Query: 131 AAGVPVAGLTALQALKAIGTKFDGSGTSGGADVLITAASSGVGTYAVQLAK 181
A V LTA Q L +G VLI A+ GVGT AVQL K
Sbjct: 155 GASFIVNYLTAYQVLFRMGN------LKPNEVVLIHMAAGGVGTAAVQLCK 199
>AK060364
Length = 332
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 110/244 (45%), Gaps = 28/244 (11%)
Query: 24 ALKFVEI-PVPSVKKDEVLVKVEAASINQSDLMTQKGMM-RPFHPKFPFIPVNNVSGEIV 81
A + VE+ +P+ + V+VK IN +D++ G+ RP PF GE+V
Sbjct: 18 ATRIVEVTELPAAAEGHVVVKNHYVGINATDVIITNGLYDRPL----PFSCGLEGVGEVV 73
Query: 82 EVGSAVREFKVGDKVVSKLDFWTAGGLAEYVATSDKLTVARPAGISAADAAGVPV--AGL 139
VG V FK+GD + + G EY+A + A + A D + +PV G+
Sbjct: 74 TVGEGVENFKIGDAIA----YQKMGAFTEYIA----VPAATAHKVPAIDPSVLPVLVQGI 125
Query: 140 TALQALKAIGTKFDGSGTSGGADVLITAASSGVGTYAVQLAKL-GNHRVTATCGARNLGL 198
+A AL+ +G G VL+TAA+ G G + VQLAKL GNH + T +
Sbjct: 126 SAAVALEQVGE------MKSGETVLVTAAAGGAGQFVVQLAKLAGNHVIGTTSSDEKAEV 179
Query: 199 VAGLGADEVLDYKTPE-GAALSSPSGKKYDYIVNISNKNKWSVFKPRLSSHGRVVDVAPN 257
+ LG D V++Y + L + K D + + + ++ GR++
Sbjct: 180 LKELGCDRVINYNKEDIDTVLKTEYPKGVDLVFDTVGGETFKAAVQNIAVRGRLI----V 235
Query: 258 FGNF 261
FGN
Sbjct: 236 FGNI 239
>Os09g0459800 Similar to ARP protein
Length = 634
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 91/346 (26%), Positives = 138/346 (39%), Gaps = 64/346 (18%)
Query: 22 AAALKFVEIPVPSVKKDEVLVKVEAASINQSDLMTQKGMM-----RPFHPKFPFIPVNNV 76
A L+ V + +P V+ LVK+ A +N SD+ G + + P
Sbjct: 303 ATRLERVRLRLP-VEPHNALVKIIYAGVNASDVNFSAGRYFSGGAKETAARLPLDAGFEA 361
Query: 77 SGEIVEVGSAVREFKVGDKVVSKLDFWTAGGLAEYVATSDK--LTVARPAGISAADAAGV 134
G + VG +V KVG V G +E+ K L V RP + +
Sbjct: 362 VGIVASVGDSVNHIKVGSPVA----LMIFGAYSEFTQVPAKHLLPVPRPD----PEVVAM 413
Query: 135 PVAGLTALQALKAIGTKFDGSGTSGGADVLITAASSGVGTYAVQLAKLGNHRVTATCGAR 194
+GLTA AL+ G + G VL+TAA+ G G +AVQLAKL ++V ATCG +
Sbjct: 414 LTSGLTASIALEKAGQ------MASGQVVLVTAAAGGTGQFAVQLAKLAGNKVVATCGGK 467
Query: 195 -NLGLVAGLGADEVLDYKT-----------PEGAAL--SSPSGKKYDYIVNISNKNKWSV 240
L++ LG D V++Y+ P GA + S G+ +D +N
Sbjct: 468 CKAALLSSLGVDRVINYQNEKIKDVLKKEFPRGADIIYESVGGEMFDLCLN--------- 518
Query: 241 FKPRLSSHGRVVDVA-------------PNFGNFVASVVTXXXXXXXXXXXXXXXXXED- 286
L+ HGR++ + N+ ++ +D
Sbjct: 519 ---ALAVHGRLIVIGMISQYQGEHGWKPRNYTGLCDKILAKSQTVAGFFLIQYAHLWQDH 575
Query: 287 LGLLLELMREGKLRTVVDSRH--PFEKAADAWARSLSGHATGKVIV 330
L L +L GKL+ +D + A DA SG + GKV+V
Sbjct: 576 LDKLFDLYASGKLKVSLDPKKFVGVASAPDAVEYLHSGKSVGKVVV 621
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.315 0.132 0.376
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 10,832,488
Number of extensions: 439921
Number of successful extensions: 1704
Number of sequences better than 1.0e-10: 15
Number of HSP's gapped: 1672
Number of HSP's successfully gapped: 15
Length of query: 332
Length of database: 17,035,801
Length adjustment: 101
Effective length of query: 231
Effective length of database: 11,762,187
Effective search space: 2717065197
Effective search space used: 2717065197
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 156 (64.7 bits)