Os04g0359100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Alcohol dehydrogenase superfamily, zinc-containing protein.
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Os04g0359100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Alcohol dehydrogenase superfamily, zinc-containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 695.41 | 1.24 | 6.86 | -6.86 | 0.868 | 4.05 | -1.09 | -7.81 | -1.28 | 15.9 | 25.12 | 1229 | 10.9 | -- |
| 713.45 | 1.24 | 6.7 | -5.05 | 1.04 | 3.58 | -1.07 | -- | -1.09 | 15.6 | 23.58 | 1169 | 10.8 | -- |
| 698.58 | 1.23 | 6.86 | -6.79 | 0.85 | 4.02 | -- | -7.45 | -1.24 | 16.1 | 25.23 | 1231 | 10.9 | -- |
| 712.87 | 1.24 | 6.7 | -4.99 | 1.15 | 3.66 | -- | -- | -1.09 | 16.2 | 23.37 | 1154 | 10.1 | -- |
| 717.88 | 1.25 | 6.96 | -7.4 | -- | 4.11 | -- | -9.54 | -1.45 | -- | 25.18 | 1589 | 9.27 | -- |
| 1108.64 | 1.56 | 6.56 | -3.94 | 0.176 | -- | 1.2 | -- | -0.534 | 23.9 | -- | -- | -- | -- |
| 1111.64 | 1.56 | 6.57 | -3.98 | 0.305 | -- | -- | -- | -0.534 | 20.2 | -- | -- | -- | -- |
| 740.2 | 1.27 | 6.69 | -5.06 | -- | 3.13 | -- | -- | -1.13 | -- | 23.65 | 1570 | 9.78 | -- |
| 1313.43 | 1.69 | 6.41 | -- | 0.788 | 2.52 | -- | -- | 0.129 | 15.4 | 26.59 | 1169 | 8.31 | -- |
| 1116.77 | 1.56 | 6.56 | -3.98 | -- | -- | -- | -- | -0.537 | -- | -- | -- | -- | -- |
| 1528.35 | 1.83 | 6.47 | -- | 0.335 | -- | -- | -- | -0.0909 | 19.3 | -- | -- | -- | -- |
| 1330.37 | 1.7 | 6.37 | -- | -- | 2.45 | -- | -- | 0.265 | -- | 26.71 | 1675 | 6.8 | -- |
| 1534.31 | 1.83 | 6.46 | -- | -- | -- | -- | -- | -0.0958 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 707.36 | temperature | 25 | 1440 | > th | dose dependent | rect. | 13 | 20 |
| 2 | 707.47 | temperature | 25 | 1440 | > th | dose dependent | rect. | 14 | 10 |
| 10 | 708.05 | temperature | 25 | 1440 | > th | dose dependent | rect. | 15 | 2 |
| 40 | 710.54 | temperature | 25 | 1440 | > th | dose dependent | sin | 16 | NA |
| 133 | 719.55 | temperature | 25 | 1440 | > th | dose dependent | rect. | 6 | 18 |
| 177 | 720.37 | temperature | 25 | 1440 | > th | dose dependent | no | NA | NA |
| 193 | 720.96 | temperature | 25 | 1440 | > th | dose dependent | rect. | 20 | 23 |
| 381 | 748.08 | temperature | 30 | 1440 | < th | dose independent | sin | 16 | NA |
| 388 | 748.95 | temperature | 30 | 1440 | < th | dose independent | rect. | 13 | 18 |
| 389 | 748.95 | temperature | 30 | 1440 | < th | dose independent | rect. | 11 | 20 |
| 391 | 749.02 | temperature | 30 | 1440 | < th | dose independent | rect. | 11 | 16 |
| 393 | 749.03 | temperature | 30 | 1440 | < th | dose independent | rect. | 13 | 14 |
| 397 | 749.07 | temperature | 30 | 1440 | < th | dose independent | rect. | 11 | 14 |
| 399 | 749.10 | temperature | 30 | 1440 | < th | dose independent | rect. | 13 | 12 |
| 405 | 749.16 | temperature | 30 | 1440 | < th | dose independent | rect. | 11 | 8 |
| 406 | 749.17 | temperature | 30 | 1440 | < th | dose independent | rect. | 11 | 11 |
| 410 | 749.23 | temperature | 30 | 1440 | < th | dose independent | rect. | 13 | 6 |
| 411 | 749.23 | temperature | 30 | 1440 | < th | dose independent | rect. | 13 | 9 |
| 499 | 751.17 | temperature | 30 | 1440 | < th | dose independent | rect. | 13 | 23 |
| 506 | 751.59 | temperature | 30 | 1440 | > th | dose independent | sin | 16 | NA |
| 507 | 751.61 | temperature | 30 | 1440 | > th | dose independent | rect. | 14 | 5 |
| 525 | 751.97 | temperature | 30 | 1440 | < th | dose independent | rect. | 17 | 23 |
| 542 | 752.84 | temperature | 30 | 1440 | < th | dose independent | rect. | 20 | 23 |
| 543 | 752.85 | temperature | 30 | 1440 | < th | dose independent | rect. | 6 | 21 |
| 550 | 752.90 | temperature | 30 | 1440 | < th | dose independent | rect. | 6 | 19 |
| 553 | 752.93 | temperature | 30 | 1440 | < th | dose independent | rect. | 23 | 20 |
| 554 | 752.93 | temperature | 30 | 1440 | < th | dose independent | rect. | 2 | 23 |
| 556 | 752.93 | temperature | 30 | 1440 | < th | dose independent | rect. | 23 | 23 |
| 561 | 752.96 | temperature | 30 | 1440 | < th | dose independent | no | NA | NA |
| 564 | 752.97 | temperature | 30 | 1440 | < th | dose independent | rect. | 6 | 13 |
| 565 | 752.97 | temperature | 30 | 1440 | < th | dose independent | rect. | 6 | 16 |
| 573 | 753.00 | temperature | 30 | 1440 | < th | dose independent | rect. | 2 | 17 |
| 576 | 753.00 | temperature | 30 | 1440 | < th | dose independent | rect. | 2 | 20 |
| 661 | 754.09 | temperature | 30 | 1440 | > th | dose independent | rect. | 11 | 8 |
| 752 | 755.53 | temperature | 30 | 1440 | > th | dose independent | rect. | 14 | 22 |
| 801 | 757.05 | wind | 7 | 43200 | > th | dose independent | rect. | 17 | 22 |
| 804 | 757.14 | temperature | 30 | 1440 | > th | dose independent | rect. | 17 | 23 |
| 805 | 757.16 | wind | 5 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 844 | 757.91 | wind | 7 | 43200 | < th | dose independent | rect. | 17 | 22 |
| 848 | 758.08 | temperature | 30 | 1440 | > th | dose independent | no | NA | NA |
| 957 | 759.03 | wind | 5 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 972 | 759.55 | temperature | 10 | 1440 | > th | dose dependent | rect. | 16 | 1 |
| 983 | 760.20 | wind | 7 | 43200 | < th | dose independent | rect. | 19 | 20 |