BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os04g0359100 Os04g0359100|AK069384
(332 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G13010.1 | chr4:7600682-7602567 FORWARD LENGTH=330 338 2e-93
AT1G23740.1 | chr1:8398245-8399656 REVERSE LENGTH=387 129 2e-30
AT4G21580.1 | chr4:11475822-11477514 FORWARD LENGTH=326 96 2e-20
AT3G15090.1 | chr3:5076847-5078870 FORWARD LENGTH=367 91 1e-18
AT1G49670.2 | chr1:18381591-18386021 REVERSE LENGTH=653 75 5e-14
AT3G45770.1 | chr3:16805753-16807774 REVERSE LENGTH=376 60 2e-09
AT3G56460.1 | chr3:20933029-20934425 REVERSE LENGTH=349 58 7e-09
AT5G61510.1 | chr5:24737084-24738975 REVERSE LENGTH=407 52 4e-07
>AT4G13010.1 | chr4:7600682-7602567 FORWARD LENGTH=330
Length = 329
Score = 338 bits (868), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 179/325 (55%), Positives = 229/325 (70%), Gaps = 5/325 (1%)
Query: 10 MRAVQYSGYGGGAAALKFVEIPVPSVKKDEVLVKVEAASINQSDLMTQKGMMRPFHP-KF 68
M A+QY+ YGGGAA L+ V++PVP+ K +EV +K+EA S+N D QKGM+RPF P KF
Sbjct: 6 MHALQYNSYGGGAAGLEHVQVPVPTPKSNEVCLKLEATSLNPVDWKIQKGMIRPFLPRKF 65
Query: 69 PFIPVNNVSGEIVEVGSAVREFKVGDKVVSKLDFWTAGGLAEYVATSDKLTVARPAGISA 128
P IP +V+GE+VEVGS V+ FK GDKVV+ L GGLAE+ ++KLTV RP + A
Sbjct: 66 PCIPATDVAGEVVEVGSGVKNFKAGDKVVAVLSHLGGGGLAEFAVATEKLTVKRPQEVGA 125
Query: 129 ADAAGVPVAGLTALQAL-KAIGTKFDGSGTSGGADVLITAASSGVGTYAVQLAKLGNHRV 187
A+AA +PVAGLTALQAL G K DG+G A++L+TAAS GVG YAVQLAKL N V
Sbjct: 126 AEAAALPVAGLTALQALTNPAGLKLDGTGKK--ANILVTAASGGVGHYAVQLAKLANAHV 183
Query: 188 TATCGARNLGLVAGLGADEVLDYKTPEGAALSSPSGKKYDYIVNISNKNKWSVFKPRLSS 247
TATCGARN+ V LGADEVLDYKTPEGAAL SPSGKKYD +V+ +N +SVF+P LS
Sbjct: 184 TATCGARNIEFVKSLGADEVLDYKTPEGAALKSPSGKKYDAVVHCANGIPFSVFEPNLSE 243
Query: 248 HGRVVDVAPN-FGNFVASVVTXXXXXXXXXXXXXXXXXEDLGLLLELMREGKLRTVVDSR 306
+G+V+D+ P + +V E+L ++ L++EGK++TV+DS+
Sbjct: 244 NGKVIDITPGPNAMWTYAVKKITMSKKQLVPLLLIPKAENLEFMVNLVKEGKVKTVIDSK 303
Query: 307 HPFEKAADAWARSLSGHATGKVIVE 331
HP KA DAWA+S+ GHATGK+IVE
Sbjct: 304 HPLSKAEDAWAKSIDGHATGKIIVE 328
>AT1G23740.1 | chr1:8398245-8399656 REVERSE LENGTH=387
Length = 386
Score = 129 bits (325), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 111/339 (32%), Positives = 161/339 (47%), Gaps = 46/339 (13%)
Query: 7 PATMRAVQYSGYGGGAAALKFVEIPVPSVKKDEVLVKVEAASINQSDLMTQKGMMRPFHP 66
P M+A YS YGG I VP +K+D+VL+KV AA++N D ++G +
Sbjct: 75 PKEMKAWVYSDYGGVDVLKLESNIVVPEIKEDQVLIKVVAAALNPVDAKRRQGKFKATDS 134
Query: 67 KFPFIPVNNVSGEIVEVGSAVREFKVGDKVVSKLDFWTA------GGLAEYVATSDKLTV 120
P +P +V+G +V+VGSAV++ K GD+V + + G LAEY A +KL
Sbjct: 135 PLPTVPGYDVAGVVVKVGSAVKDLKEGDEVYANVSEKALEGPKQFGSLAEYTAVEEKLLA 194
Query: 121 ARPAGISAADAAGVPVAGLTALQALKAIGTKFDGSGTSGGADVLITAASSGVGTYAVQLA 180
+P I A AAG+P+A TA + L + T+F S G +L+ + GVG+ +QLA
Sbjct: 195 LKPKNIDFAQAAGLPLAIETADEGL--VRTEF-----SAGKSILVLNGAGGVGSLVIQLA 247
Query: 181 K--LGNHRVTATCGARNLGLVAGLGADEVLDYKTPEGAALSSPSGKKYDYIVNISNKNKW 238
K G +V AT L LV LGAD +DY L KYD + +
Sbjct: 248 KHVYGASKVAATASTEKLELVRSLGADLAIDYTKENIEDLPD----KYDVVFDAIGMCDK 303
Query: 239 SVFKPRLSSHGRVVDVA-----PNFGNFVASVVTXXXXXXXXXXXXXXXXXEDLGLLLEL 293
+V + G+VV + P F V S + L L
Sbjct: 304 AV--KVIKEGGKVVALTGAVTPPGFRFVVTS------------------NGDVLKKLNPY 343
Query: 294 MREGKLRTVVDSR--HPFEKAADAWARSLSGHATGKVIV 330
+ GK++ VVD + PF + ADA++ + HATGKV+V
Sbjct: 344 IESGKVKPVVDPKGPFPFSRVADAFSYLETNHATGKVVV 382
>AT4G21580.1 | chr4:11475822-11477514 FORWARD LENGTH=326
Length = 325
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 107/215 (49%), Gaps = 13/215 (6%)
Query: 20 GGAAALKFVEIPVPSVKKDEVLVKVEAASINQSDLMTQKGMMRPFHPKFPFIPVNNVSGE 79
G L+ ++ P VK DEVL++V A ++N++D + + G+ P P++ + SG
Sbjct: 10 GKPEVLQLRDVADPEVKDDEVLIRVLATALNRADTLQRLGLYNPPPGSSPYLGL-ECSGT 68
Query: 80 IVEVGSAVREFKVGDKVVSKLDFWTAGGLAEYVATSDKLTVARPAGISAADAAGVPVAGL 139
I VG V +KVGD+V + L + GG AE V+ PAGIS DAA P
Sbjct: 69 IESVGKGVSRWKVGDQVCALL---SGGGYAEKVSVPAGQIFPIPAGISLKDAAAFPEVAC 125
Query: 140 TALQALKAIGTKFDGSGTSGGADVLITAASSGVGTYAVQLAKLGNHRVTATCGA-RNLGL 198
T + +G S G LI SSG+GT+A+Q+AK RV T G+ L
Sbjct: 126 TVWSTVFMMGR------LSVGESFLIHGGSSGIGTFAIQIAKHLGVRVFVTAGSDEKLAA 179
Query: 199 VAGLGADEVLDYKTPEGAA--LSSPSGKKYDYIVN 231
LGAD ++YKT + A + GK D I++
Sbjct: 180 CKELGADVCINYKTEDFVAKVKAETDGKGVDVILD 214
>AT3G15090.1 | chr3:5076847-5078870 FORWARD LENGTH=367
Length = 366
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/207 (32%), Positives = 106/207 (51%), Gaps = 10/207 (4%)
Query: 11 RAVQYSGYGGGAAALKFVEIPVPSVKKDEVLVKVEAASINQSDLMTQKGMMRP-FHPKFP 69
RAV +GG +PVP++ +EVLVK +A S+N D + G R F P P
Sbjct: 33 RAVILPRFGGPEVFELRENVPVPNLNPNEVLVKAKAVSVNPLDCRIRAGYGRSVFQPHLP 92
Query: 70 FIPVNNVSGEIVEVGSAVREFKVGDKVVSKLD-FWTAGGLAEY-VATSDKLTVARPAGIS 127
I +VSGE+ +G++V+ KVG +V L G +Y + + D+LT +P+ IS
Sbjct: 93 IIVGRDVSGEVAAIGTSVKSLKVGQEVFGALHPTALRGTYTDYGILSEDELT-EKPSSIS 151
Query: 128 AADAAGVPVAGLTALQALKAIGTKFDGSGTSGGADVLITAASSGVGTYAVQLAKLGNHRV 187
+A+ +P A LTA +ALK+ + + G +L+ VG A+QLA V
Sbjct: 152 HVEASAIPFAALTAWRALKS------NARITEGQRLLVFGGGGAVGFSAIQLAVASGCHV 205
Query: 188 TATCGARNLGLVAGLGADEVLDYKTPE 214
TA+C + + GA++ +DY T +
Sbjct: 206 TASCVGQTKDRILAAGAEQAVDYTTED 232
>AT1G49670.2 | chr1:18381591-18386021 REVERSE LENGTH=653
Length = 652
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 95/344 (27%), Positives = 141/344 (40%), Gaps = 74/344 (21%)
Query: 39 EVLVKVEAASINQSDLMTQKGMMRPF---HPKFPFIPVNNVSGEIVEVGSAVREFKVGDK 95
+VL+K+ A +N SD+ G R F PK PF G I VG +V+ +VG
Sbjct: 318 QVLLKIIYAGVNASDVNFSSG--RYFTGGSPKLPFDAGFEGVGLIAAVGESVKNLEVGTP 375
Query: 96 VVSKLDFWTAGGLAEYVATSDK--LTVARPAGISAADAAGVPVAGLTALQALK------- 146
T G +EY+ S K L V RP + + +GLTAL AL+
Sbjct: 376 AA----VMTFGAYSEYMIVSSKHVLPVPRPD----PEVVAMLTSGLTALIALEKLYDILK 427
Query: 147 ---AIGTKFD---GSGTSG----GADVLITAASSGVGTYAVQLAKLGNHRVTATC-GARN 195
+ F G+ +G G VL+TAA+ G G +AVQLAKL ++V ATC G+
Sbjct: 428 LLVQLSLTFSLSYGNSQAGQMKSGETVLVTAAAGGTGQFAVQLAKLSGNKVIATCGGSEK 487
Query: 196 LGLVAGLGADEVLDYKT-----------PEGAAL--SSPSGKKYDYIVNISNKNKWSVFK 242
L+ LG D V+DYK+ P+G + S G+ +D +N
Sbjct: 488 AKLLKELGVDRVIDYKSENIKTVLKKEFPKGVNIIYESVGGQMFDMCLN----------- 536
Query: 243 PRLSSHGRVVDVA-------------PNFGNFVASVVTXXXXXXXXXXXXXXXX-XEDLG 288
L+ +GR++ + + ++ ++L
Sbjct: 537 -ALAVYGRLIVIGMISQYQGEKGWEPAKYPGLCEKILAKSQTVAGFFLVQYSQLWKQNLD 595
Query: 289 LLLELMREGKLRTVVDSRH--PFEKAADAWARSLSGHATGKVIV 330
L L GKL+ +D + ADA SG +TGKV+V
Sbjct: 596 KLFNLYALGKLKVGIDQKKFIGLNAVADAVEYLHSGKSTGKVVV 639
>AT3G45770.1 | chr3:16805753-16807774 REVERSE LENGTH=376
Length = 375
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 80/172 (46%), Gaps = 9/172 (5%)
Query: 11 RAVQYSGYGGGAAALKFVEIPVPSVKKDEVLVKVEAASINQSDLMTQKGMMRPFHPKFPF 70
+A+ Y +G + + V +P VK+++V VK+ AA IN SD+ +G+ P P P
Sbjct: 46 KAIVYEEHGSPDSVTRLVNLPPVEVKENDVCVKMIAAPINPSDINRIEGVY-PVRPPVPA 104
Query: 71 IPVNNVSGEIVEVGSAVREFKVGDKVVSKLDFWTAGGLAEYVATSDKLTVARPAGISAAD 130
+ GE+ VGS V F GD V+ ++G YV + +
Sbjct: 105 VGGYEGVGEVYAVGSNVNGFSPGDWVIPSPP--SSGTWQTYVVKEESVWHKIDKECPMEY 162
Query: 131 AAGVPVAGLTALQALKAIGTKFDGSGTSGGADVLITAASSGVGTYAVQLAKL 182
AA + V LTAL+ L+ D + G V+ A+S VG +QLA+L
Sbjct: 163 AATITVNPLTALRMLE------DFVNLNSGDSVVQNGATSIVGQCVIQLARL 208
>AT3G56460.1 | chr3:20933029-20934425 REVERSE LENGTH=349
Length = 348
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 89/184 (48%), Gaps = 12/184 (6%)
Query: 31 PVPSVKKD-EVLVKVEAASINQSDLMTQKGMMRPFHPKFPFIPVNNVSGEIVEVGSAVRE 89
P+PS+ D V V+V A S+N ++ + G + P PFIP ++ SG + +G AV +
Sbjct: 31 PIPSLNSDTSVRVRVIATSLNYANYLQILGKYQE-KPPLPFIPGSDYSGIVDAIGPAVTK 89
Query: 90 FKVGDKVVSKLDFWTAGGLAEYVATSDKLTVARPAGISAADAAGVPVAGLTALQALKAIG 149
F+VGD+V S D G A+++ P AA +PVA T+ AL
Sbjct: 90 FRVGDRVCSFADL---GSFAQFIVADQSRLFLVPERCDMVAAAALPVAFGTSHVAL---- 142
Query: 150 TKFDGSGTSGGADVLITAASSGVGTYAVQLAKLGNHRVTATC-GARNLGLVAGLGADEVL 208
+ + G +L+ A+ GVG AVQ+ K+ V A G + L+ +G D V+
Sbjct: 143 --VHRARLTSGQVLLVLGAAGGVGLAAVQIGKVCGAIVIAVARGTEKIQLLKSMGVDHVV 200
Query: 209 DYKT 212
D T
Sbjct: 201 DLGT 204
>AT5G61510.1 | chr5:24737084-24738975 REVERSE LENGTH=407
Length = 406
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 77/163 (47%), Gaps = 12/163 (7%)
Query: 20 GGAAALKFVEIPVPSVKKDEVLVKVEAASINQSDLMTQKGMMRPFHPKFPFIPVNNVSGE 79
GG LK+ ++ V K+ E+ VK +A +N D+ +KG+ +P PF P GE
Sbjct: 93 GGPEVLKWEDVEVGEPKEGEIRVKNKAIGLNFIDVYFRKGVYKP--ASMPFTPGMEAVGE 150
Query: 80 IVEVGSAVREFKVGDKVVSKLDFWTAGGLA-EYVATSDKLTVARPAGISAADAAGVPVAG 138
+V VGS + +GD V + G A E + +DK+ V P+ I AA + + G
Sbjct: 151 VVAVGSGLTGRMIGDLVAYAGN--PMGAYAEEQILPADKV-VPVPSSIDPIVAASIMLKG 207
Query: 139 LTALQALKAIGTKFDGSGTSGGADVLITAASSGVGTYAVQLAK 181
+TA L+ G +L+ AA+ GVG+ Q A
Sbjct: 208 MTAQFLLRRCFK------VEPGHTILVHAAAGGVGSLLCQWAN 244
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.315 0.132 0.376
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 6,455,016
Number of extensions: 252581
Number of successful extensions: 748
Number of sequences better than 1.0e-05: 8
Number of HSP's gapped: 733
Number of HSP's successfully gapped: 8
Length of query: 332
Length of database: 11,106,569
Length adjustment: 99
Effective length of query: 233
Effective length of database: 8,392,385
Effective search space: 1955425705
Effective search space used: 1955425705
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 112 (47.8 bits)