Os04g0372700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Quinone-oxidoreductase QR1 (Fragment).
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Os04g0372700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Quinone-oxidoreductase QR1 (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 213.71 | 0.687 | 8.51 | 0.0232 | 3.61 | 1.38 | 1.48 | -1.01 | -0.378 | 9.95 | 76.38 | 1224 | -- | -- |
| 214.15 | 0.682 | 8.5 | 0.0902 | 3.67 | 1.32 | 1.65 | -- | -0.374 | 9.97 | 77.78 | 1143 | -- | -- |
| 220.62 | 0.692 | 8.5 | 0.0404 | 3.65 | 1.4 | -- | -1.7 | -0.352 | 9.94 | 76.39 | 1112 | -- | -- |
| 223.98 | 0.697 | 8.49 | 0.176 | 3.67 | 1.29 | -- | -- | -0.373 | 9.94 | 78.15 | 1148 | -- | -- |
| 818.27 | 1.34 | 8.58 | 0.306 | -- | 2.37 | -- | 0.803 | -0.328 | -- | 83.7 | 1510 | -- | -- |
| 252.4 | 0.745 | 8.51 | 0.344 | 3.45 | -- | 1.38 | -- | -0.441 | 9.77 | -- | -- | -- | -- |
| 259.62 | 0.755 | 8.51 | 0.396 | 3.45 | -- | -- | -- | -0.439 | 9.75 | -- | -- | -- | -- |
| 816.89 | 1.34 | 8.59 | 0.314 | -- | 2.36 | -- | -- | -0.341 | -- | 85.33 | 1533 | -- | -- |
| 224.73 | 0.698 | 8.5 | -- | 3.67 | 1.33 | -- | -- | -0.385 | 9.92 | 77.96 | 1145 | -- | -- |
| 966.91 | 1.45 | 8.61 | 0.363 | -- | -- | -- | -- | -0.435 | -- | -- | -- | -- | -- |
| 263.76 | 0.76 | 8.52 | -- | 3.45 | -- | -- | -- | -0.483 | 9.74 | -- | -- | -- | -- |
| 819.48 | 1.34 | 8.59 | -- | -- | 2.37 | -- | -- | -0.376 | -- | 85.33 | 1533 | -- | -- |
| 970.39 | 1.45 | 8.62 | -- | -- | -- | -- | -- | -0.475 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 214.39 | radiation | 10 | 90 | < th | dose dependent | rect. | 5 | 23 |
| 2 | 216.06 | humidity | 80 | 1440 | < th | dose dependent | rect. | 19 | 19 |
| 11 | 216.88 | humidity | 80 | 1440 | < th | dose dependent | sin | 5 | NA |
| 19 | 217.26 | humidity | 80 | 1440 | < th | dose dependent | rect. | 1 | 13 |
| 21 | 217.28 | humidity | 80 | 1440 | < th | dose dependent | rect. | 6 | 8 |
| 66 | 217.78 | humidity | 80 | 1440 | < th | dose independent | rect. | 6 | 8 |
| 67 | 217.78 | humidity | 60 | 720 | > th | dose independent | rect. | 15 | 20 |
| 72 | 217.80 | humidity | 80 | 1440 | < th | dose dependent | rect. | 15 | 23 |
| 91 | 218.31 | humidity | 80 | 1440 | < th | dose dependent | rect. | 24 | 22 |
| 96 | 218.33 | humidity | 80 | 1440 | < th | dose dependent | rect. | 6 | 21 |
| 99 | 218.34 | wind | 1 | 14400 | > th | dose independent | rect. | 1 | 1 |
| 104 | 218.35 | humidity | 80 | 1440 | < th | dose dependent | no | NA | NA |
| 109 | 218.36 | humidity | 80 | 1440 | < th | dose dependent | rect. | 6 | 16 |
| 172 | 218.51 | humidity | 50 | 720 | > th | dose dependent | rect. | 8 | 19 |
| 191 | 218.62 | humidity | 70 | 1440 | > th | dose independent | rect. | 17 | 21 |
| 193 | 218.62 | humidity | 80 | 1440 | < th | dose dependent | rect. | 11 | 23 |
| 201 | 218.67 | radiation | 10 | 30 | < th | dose dependent | rect. | 19 | 23 |
| 209 | 218.87 | humidity | 90 | 1440 | < th | dose dependent | rect. | 11 | 3 |
| 233 | 219.10 | radiation | 20 | 4320 | > th | dose dependent | rect. | 7 | 1 |
| 238 | 219.15 | humidity | 80 | 1440 | > th | dose independent | rect. | 6 | 9 |
| 244 | 219.23 | humidity | 80 | 720 | < th | dose dependent | rect. | 12 | 21 |
| 246 | 219.24 | radiation | 10 | 10 | < th | dose dependent | rect. | 7 | 23 |
| 250 | 219.31 | humidity | 70 | 720 | > th | dose independent | rect. | 16 | 3 |
| 251 | 219.32 | humidity | 50 | 1440 | > th | dose dependent | rect. | 11 | 3 |
| 256 | 219.37 | humidity | 60 | 720 | > th | dose independent | rect. | 15 | 13 |
| 292 | 219.61 | radiation | 1 | 90 | < th | dose independent | rect. | 5 | 23 |
| 314 | 219.72 | humidity | 50 | 720 | > th | dose dependent | rect. | 15 | 5 |
| 328 | 219.87 | radiation | 30 | 4320 | < th | dose independent | rect. | 7 | 1 |
| 334 | 219.92 | humidity | 70 | 1440 | < th | dose independent | rect. | 17 | 21 |
| 339 | 219.97 | humidity | 60 | 720 | > th | dose independent | rect. | 15 | 5 |
| 344 | 219.99 | radiation | 20 | 4320 | > th | dose independent | rect. | 7 | 1 |
| 363 | 220.17 | radiation | 30 | 4320 | < th | dose independent | rect. | 2 | 6 |
| 371 | 220.25 | radiation | 30 | 4320 | < th | dose independent | rect. | 18 | 14 |
| 426 | 220.45 | humidity | 80 | 720 | < th | dose dependent | rect. | 12 | 15 |
| 431 | 220.47 | humidity | 80 | 1440 | > th | dose independent | rect. | 2 | 13 |
| 445 | 220.52 | humidity | 80 | 720 | < th | dose dependent | rect. | 12 | 10 |
| 463 | 220.59 | humidity | 50 | 720 | > th | dose dependent | rect. | 7 | 13 |
| 476 | 220.68 | humidity | 50 | 1440 | > th | dose dependent | rect. | 8 | 8 |
| 532 | 220.80 | humidity | 50 | 720 | > th | dose dependent | rect. | 15 | 12 |
| 538 | 220.81 | radiation | 10 | 10 | < th | dose dependent | rect. | 13 | 23 |
| 539 | 220.82 | radiation | 10 | 10 | < th | dose dependent | no | NA | NA |
| 544 | 220.83 | radiation | 10 | 10 | < th | dose dependent | rect. | 11 | 23 |
| 572 | 220.97 | radiation | 10 | 10 | < th | dose dependent | rect. | 15 | 23 |
| 598 | 221.06 | wind | 1 | 14400 | < th | dose independent | rect. | 1 | 1 |
| 681 | 221.12 | radiation | 10 | 10 | < th | dose dependent | rect. | 9 | 23 |
| 788 | 221.45 | humidity | 70 | 1440 | > th | dose independent | rect. | 9 | 5 |
| 806 | 221.49 | humidity | 60 | 1440 | < th | dose independent | rect. | 14 | 22 |
| 931 | 221.68 | humidity | 60 | 1440 | < th | dose dependent | rect. | 15 | 1 |
| 941 | 221.71 | humidity | 80 | 1440 | < th | dose independent | sin | 3 | NA |