Os02g0805600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Alcohol dehydrogenase, zinc-containing.
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Os02g0805600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Alcohol dehydrogenase, zinc-containing.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 12.88 | 0.169 | 13.3 | -0.846 | 0.53 | 0.591 | -0.0213 | -5.5 | 0.0948 | 22.5 | 30 | 1656 | -- | -- |
| 14.87 | 0.18 | 13.2 | 0.057 | 0.531 | 0.0842 | -0.0181 | -- | 0.127 | 22.4 | 24.2 | 1805 | -- | -- |
| 12.82 | 0.167 | 13.3 | -0.833 | 0.532 | 0.64 | -- | -5.87 | 0.101 | 22.5 | 30 | 1789 | -- | -- |
| 14.63 | 0.178 | 13.2 | 0.0424 | 0.54 | 0.11 | -- | -- | 0.119 | 22.4 | 22.28 | 1504 | -- | -- |
| 28.98 | 0.251 | 13.3 | -0.974 | -- | 0.765 | -- | -5.92 | 0.0628 | -- | 29.85 | 2282 | -- | -- |
| 15.1 | 0.182 | 13.2 | 0.0816 | 0.541 | -- | -0.052 | -- | 0.154 | 22.4 | -- | -- | -- | -- |
| 15.11 | 0.182 | 13.2 | 0.0837 | 0.541 | -- | -- | -- | 0.154 | 22.4 | -- | -- | -- | -- |
| 27.01 | 0.242 | 13.2 | -0.0467 | -- | 0.386 | -- | -- | 0.0383 | -- | 25.2 | 761 | -- | -- |
| 14.64 | 0.178 | 13.2 | -- | 0.531 | 0.121 | -- | -- | 0.109 | 22.4 | 21.11 | 5780 | -- | -- |
| 33.04 | 0.269 | 13.2 | 0.0927 | -- | -- | -- | -- | 0.156 | -- | -- | -- | -- | -- |
| 15.29 | 0.183 | 13.2 | -- | 0.542 | -- | -- | -- | 0.145 | 22.4 | -- | -- | -- | -- |
| 26.96 | 0.242 | 13.2 | -- | -- | 0.366 | -- | -- | 0.026 | -- | 25.1 | 761 | -- | -- |
| 33.26 | 0.269 | 13.2 | -- | -- | -- | -- | -- | 0.146 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 13.00 | wind | 1 | 43200 | < th | dose dependent | rect. | 6 | 1 |
| 2 | 13.06 | temperature | 30 | 1440 | > th | dose independent | rect. | 8 | 9 |
| 18 | 13.08 | temperature | 30 | 1440 | > th | dose independent | sin | 1 | NA |
| 40 | 13.11 | temperature | 30 | 1440 | > th | dose independent | no | NA | NA |
| 157 | 13.11 | temperature | 30 | 1440 | > th | dose independent | rect. | 13 | 23 |
| 206 | 13.16 | wind | 1 | 43200 | > th | dose independent | rect. | 4 | 4 |
| 208 | 13.16 | temperature | 30 | 1440 | < th | dose independent | rect. | 4 | 13 |
| 209 | 13.16 | temperature | 30 | 1440 | < th | dose independent | rect. | 22 | 19 |
| 210 | 13.17 | temperature | 30 | 1440 | < th | dose independent | sin | 2 | NA |
| 213 | 13.17 | radiation | 20 | 43200 | > th | dose independent | rect. | 9 | 1 |
| 214 | 13.17 | wind | 1 | 43200 | < th | dose independent | rect. | 4 | 4 |
| 215 | 13.17 | temperature | 30 | 1440 | < th | dose independent | rect. | 8 | 9 |
| 228 | 13.17 | temperature | 30 | 1440 | < th | dose independent | rect. | 14 | 23 |
| 232 | 13.18 | temperature | 25 | 4320 | > th | dose independent | rect. | 5 | 3 |
| 249 | 13.19 | temperature | 30 | 1440 | < th | dose independent | no | NA | NA |
| 251 | 13.19 | temperature | 25 | 4320 | < th | dose independent | rect. | 5 | 3 |
| 279 | 13.19 | temperature | 30 | 1440 | < th | dose independent | rect. | 4 | 19 |
| 295 | 13.19 | temperature | 30 | 1440 | < th | dose independent | rect. | 8 | 22 |
| 307 | 13.19 | wind | 1 | 43200 | < th | dose dependent | rect. | 4 | 4 |
| 389 | 13.21 | wind | 1 | 43200 | < th | dose dependent | rect. | 20 | 2 |
| 480 | 13.27 | wind | 1 | 43200 | > th | dose independent | rect. | 9 | 2 |
| 578 | 13.30 | radiation | 30 | 43200 | < th | dose dependent | rect. | 9 | 1 |
| 596 | 13.33 | temperature | 30 | 1440 | < th | dose independent | sin | 12 | NA |
| 639 | 13.34 | radiation | 20 | 43200 | > th | dose independent | sin | 4 | NA |
| 642 | 13.34 | radiation | 20 | 14400 | < th | dose independent | rect. | 8 | 1 |
| 679 | 13.35 | radiation | 10 | 43200 | > th | dose independent | sin | 10 | NA |
| 699 | 13.35 | humidity | 60 | 43200 | < th | dose dependent | rect. | 13 | 1 |
| 707 | 13.36 | humidity | 80 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 708 | 13.36 | radiation | 20 | 43200 | > th | dose independent | rect. | 13 | 1 |
| 709 | 13.36 | wind | 1 | 43200 | < th | dose independent | rect. | 9 | 2 |
| 749 | 13.37 | wind | 1 | 43200 | > th | dose independent | rect. | 21 | 1 |
| 750 | 13.37 | wind | 1 | 43200 | < th | dose independent | rect. | 21 | 1 |
| 789 | 13.38 | humidity | 70 | 43200 | > th | dose independent | rect. | 18 | 1 |