BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os02g0805600 Os02g0805600|AK099516
         (328 letters)

Database: rap3 
           52,214 sequences; 17,035,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Os02g0805600  Similar to Alcohol dehydrogenase, zinc-containing   588   e-168
Os06g0474100                                                      117   1e-26
Os03g0101600  Similar to Quinone oxidoreductase                   112   3e-25
AK063662                                                          103   2e-22
Os10g0561100  Similar to Quinone oxidoreductase                   100   2e-21
AK109117                                                           88   8e-18
AK060364                                                           86   4e-17
Os09g0459800  Similar to ARP protein                               84   1e-16
Os04g0359100  Alcohol dehydrogenase superfamily, zinc-contai...    69   7e-12
Os08g0379400  Similar to Quinone oxidoreductase-like protein       67   1e-11
AK061134                                                           66   4e-11
>Os02g0805600 Similar to Alcohol dehydrogenase, zinc-containing
          Length = 328

 Score =  588 bits (1515), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 299/328 (91%), Positives = 299/328 (91%)

Query: 1   MRAVVIARAGGPEVLEERDXXXXXXXXXXXXXXXXXSAAGVNRADTVQRQGRXXXXXXXX 60
           MRAVVIARAGGPEVLEERD                 SAAGVNRADTVQRQGR        
Sbjct: 1   MRAVVIARAGGPEVLEERDVGEGLPPPGEGEVLVGVSAAGVNRADTVQRQGRYPAPPGAS 60

Query: 61  XXXXLECSGTILALGPNVPSRWAVGDQVCALLSSGGYAEKVVVPAGQLLPVPEGVSLTDA 120
               LECSGTILALGPNVPSRWAVGDQVCALLSSGGYAEKVVVPAGQLLPVPEGVSLTDA
Sbjct: 61  PYPGLECSGTILALGPNVPSRWAVGDQVCALLSSGGYAEKVVVPAGQLLPVPEGVSLTDA 120

Query: 121 AGLPEVACTVWSTVFVTSHLSPSESFLIHGGSSGIGTFAIQIAKHLGIKVFVTAGSEEKL 180
           AGLPEVACTVWSTVFVTSHLSPSESFLIHGGSSGIGTFAIQIAKHLGIKVFVTAGSEEKL
Sbjct: 121 AGLPEVACTVWSTVFVTSHLSPSESFLIHGGSSGIGTFAIQIAKHLGIKVFVTAGSEEKL 180

Query: 181 AACKGLGADVCINYKTEDFVARVKEETNGKGVDVILDNIGGLYLQRNLNSLAVDGRLFII 240
           AACKGLGADVCINYKTEDFVARVKEETNGKGVDVILDNIGGLYLQRNLNSLAVDGRLFII
Sbjct: 181 AACKGLGADVCINYKTEDFVARVKEETNGKGVDVILDNIGGLYLQRNLNSLAVDGRLFII 240

Query: 241 GFQGGAVTEVNLQPMLARRLTIQAAGLRNRSLDNKALIVSEVEKNVWPAVVQGKVKPVIY 300
           GFQGGAVTEVNLQPMLARRLTIQAAGLRNRSLDNKALIVSEVEKNVWPAVVQGKVKPVIY
Sbjct: 241 GFQGGAVTEVNLQPMLARRLTIQAAGLRNRSLDNKALIVSEVEKNVWPAVVQGKVKPVIY 300

Query: 301 KTFPLSEAAEAHKLMEESSHIGKILLIP 328
           KTFPLSEAAEAHKLMEESSHIGKILLIP
Sbjct: 301 KTFPLSEAAEAHKLMEESSHIGKILLIP 328
>Os06g0474100 
          Length = 129

 Score =  117 bits (293), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 64/93 (68%), Positives = 70/93 (75%), Gaps = 10/93 (10%)

Query: 85  GDQVC--ALLSSGGYAEKVVVPAGQLLPVPEGVSLTDAAGLPEVACTVWSTVFVTSHLSP 142
           G+ +C  ++ S G YAEKVVV AGQLL VPEGVSLTDAAGLPEVAC +WST +       
Sbjct: 25  GEDLCWSSMASGGKYAEKVVVLAGQLLSVPEGVSLTDAAGLPEVACNIWSTAW------- 77

Query: 143 SESFLIHGGSSGIGTFAIQIAKHLGIKVFVTAG 175
               LIH GSSGIGTFAIQIAK LGIKVFVTAG
Sbjct: 78  -RIVLIHCGSSGIGTFAIQIAKQLGIKVFVTAG 109
>Os03g0101600 Similar to Quinone oxidoreductase
          Length = 328

 Score =  112 bits (281), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 99/331 (29%), Positives = 145/331 (43%), Gaps = 12/331 (3%)

Query: 1   MRAVVIARAGGPEVLEERDXXXXXXXXXXXXXXXXXSAAGVNRADTVQRQGRXXXXXXXX 60
           ++ + +   GGPEVL  R                  +A GVN  D   RQG         
Sbjct: 4   VKCIRVHELGGPEVL--RWEQVEVGEPKEGEIRIKNTAIGVNFIDVYYRQG--VYSAPLP 59

Query: 61  XXXXLECSGTILALGPNVPSRWAVGDQVC-ALLSSGGYAEKVVVPAGQLLPVPEGVSLTD 119
                E  G + A+GP +  R  VGD V  A    G YA++ ++PA   +P+P  +    
Sbjct: 60  FVPGREAVGVVTAVGPGLTGR-KVGDVVAYAGNPMGSYAQEQIIPASVAVPLPPSIDHNT 118

Query: 120 AAGLPEVACTVWSTVFVTSHLSPSESFLIHGGSSGIGTFAIQIAKHLGIKVFVTAGSEEK 179
           AA +     T    +     +   +  L+H  + G+G+   Q A  LG  V  T  +EEK
Sbjct: 119 AAAIMLKGMTAHVLLRRVYKVQSGDCVLVHAAAGGVGSLLCQWANALGATVIGTVSNEEK 178

Query: 180 LAACKGLGADVCINYKTEDFVARVKEETNGKGVDVILDNIGGLYLQRNLNSLAVDGRLFI 239
            A     G    I Y  ED V RVKE T GKGV+V+ D++G    + ++  LA  G L  
Sbjct: 179 AAQAAEDGCHHVIIYTKEDVVTRVKEFTAGKGVNVVYDSVGKDTYKGSVECLAWRGMLVS 238

Query: 240 IGFQGGAVTEVNLQPMLARRLTIQAAGLRNRSLDNKALIVS--EVEKNVWPAVVQGKVKP 297
            G   G    + L  + ++ L +    L + +     L+ S  EV  NV   V++ +V  
Sbjct: 239 FGQSSGRPDPIPLSDLASKSLLVTRPSLMHYTATRDELLESAGEVFANVGSGVLRIRVN- 297

Query: 298 VIYKTFPLSEAAEAHKLMEESSHIGKILLIP 328
               T+PLS+AA AH  ++     G ILLIP
Sbjct: 298 ---HTYPLSQAARAHADLQARKTTGSILLIP 325
>AK063662 
          Length = 374

 Score =  103 bits (257), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 88/331 (26%), Positives = 145/331 (43%), Gaps = 8/331 (2%)

Query: 1   MRAVVIARAGGPEVLEERDXXXXXXXXXXXXXXXXXSAAGVNRADTVQRQGRXXXXXXXX 60
           M+AV I + GG +VL+ +                     G+N  DT  R G         
Sbjct: 49  MKAVYIEKTGGTDVLQYK-TDVPVPEPQEGEVLVKNDFIGINYIDTYFRSG-VYKPPKFP 106

Query: 61  XXXXLECSGTILALGPNVPSRWAVGDQVCALLSSGGYAEKVVVPAGQLLPVPEGVSLTDA 120
                E +GTI A+GPNVPS   VG +V   +    YAE V V A   +P+P+ +    A
Sbjct: 107 YILGREGAGTIAAVGPNVPSDLTVGTRV-GYMGQYAYAEYVPVAATYTIPLPDSIDSKTA 165

Query: 121 AGLPEVACTVWSTVFVTSHLSPSESFLIHGGSSGIGTFAIQIAKHLGIKVFVTAGSEEKL 180
           A     A T  + +     +   +  L+   + G+G +  Q+ + +G +V  +A +EEK 
Sbjct: 166 AASILQALTAITLIRDAYPVQKGDWILVTAAAGGVGLWLCQLLRAIGARVIASASTEEKR 225

Query: 181 AACKGLGADVCINYKTED---FVARVKEETNGKGVDVILDNIGGLYLQRNLNSLAVDGRL 237
              K  GA+  + Y  ED   FV +V E T G+GV  + D++G      +L ++   G +
Sbjct: 226 NLAKENGAEFVLGYYEEDRDQFVKKVLEITGGEGVHAVFDSVGKATFDSSLATIRRKGSM 285

Query: 238 FIIGFQGGAVTEVNLQPMLARRLTIQAAGLRNRSLDNKALIVSEVEKNVWPAVVQGKVKP 297
              G   G V    L  + A+ L +    L N  +  +  + +  E  +W  + +  +  
Sbjct: 286 ISFGNASGPVEGFALARLSAKNLKLMRTTLFNFIVTREETLKAAEE--LWKLIEKDGLNV 343

Query: 298 VIYKTFPLSEAAEAHKLMEESSHIGKILLIP 328
            I++ +PL +   A + +E     GK+LL P
Sbjct: 344 KIHEVYPLEDIVRATQDIEGRKTTGKLLLKP 374
>Os10g0561100 Similar to Quinone oxidoreductase
          Length = 331

 Score =  100 bits (249), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 90/329 (27%), Positives = 141/329 (42%), Gaps = 8/329 (2%)

Query: 1   MRAVVIARAGGPEVLEERDXXXXXXXXXXXXXXXXXSAAGVNRADTVQRQGRXXXXXXXX 60
           ++A+ + + GGPEVL   +                  A GVN  D   R G         
Sbjct: 3   VKAIRVHKIGGPEVLTWEEVEIGEPSEGEIRIKN--KAIGVNYVDIYYRTGLHQEPLPFV 60

Query: 61  XXXXLECSGTILALGPNVPSRWAVGDQV-CALLSSGGYAEKVVVPAGQLLPVPEGVSLTD 119
                E  G + A+GP V +   VGD V  A    G Y E+ ++PA   +P+P  V    
Sbjct: 61  PGK--EAVGVVSAVGPGV-TGIEVGDVVGYADTPMGTYTEEQIIPATLAIPIPPSVDHIT 117

Query: 120 AAGLPEVACTVWSTVFVTSHLSPSESFLIHGGSSGIGTFAIQIAKHLGIKVFVTAGSEEK 179
           AA +     T +  V     +    + L+H  + G+G+   Q A  LG  V  T  ++EK
Sbjct: 118 AASVLLKGMTTYVLVKQAFKIQAGHTVLVHAAAGGVGSLLCQWANALGATVIGTVSTQEK 177

Query: 180 LAACKGLGADVCINYKTEDFVARVKEETNGKGVDVILDNIGGLYLQRNLNSLAVDGRLFI 239
                  G    I Y  EDFVA+V E T+ KGV V+ D +G    + ++  L   G +  
Sbjct: 178 AIQAAEDGCHHVIIYTEEDFVAQVAEITSRKGVHVVYDAVGKDTFKGSMECLMPRGCMIS 237

Query: 240 IGFQGGAVTEVNLQPMLARRLTIQAAGLRNRSLDNKALIVSEVEKNVWPAVVQGKVKPVI 299
            G   G    V +  + ++ L +   G+R+ +     L+ +  E  V+  V  G ++  +
Sbjct: 238 YGQCSGRPDPVPVSDLASKSLILGRPGMRHYTATRDELLHAAGE--VFAGVAAGVLRVRV 295

Query: 300 YKTFPLSEAAEAHKLMEESSHIGKILLIP 328
              +PL EAA AH  +E     G ++L+P
Sbjct: 296 NHVYPLHEAARAHADLEARRTSGSVVLLP 324
>AK109117 
          Length = 493

 Score = 88.2 bits (217), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 82/309 (26%), Positives = 139/309 (44%), Gaps = 22/309 (7%)

Query: 38  AAGVNRADTVQRQGRXXXXXXXXXXXXLECSGTILALGPNVPSRWAVGDQVCALLSSGGY 97
           AAG+N A+ +QRQG              E +G +  +G  V + + V D+V     SG +
Sbjct: 74  AAGLNFAELMQRQGLYRPSNKCPYTPGFEAAGIVEQVGSAV-TDFKVDDRVIVFNGSGMW 132

Query: 98  AEKVVVPAGQLLPVPEGVSLTDAAGLPEVACTVWSTVFVTSHLSPSESFLIHGGSSGIGT 157
            + V V     + +P+ +S  D A       T +  +F   +L P+E  LIH  + G+GT
Sbjct: 133 KDVVTVTQKNAIKMPDNMSFEDGASFIVNYLTAYQVLFRMGNLKPNEVVLIHMAAGGVGT 192

Query: 158 FAIQIAKHLGIKVFVTAGSEEKLAACKGLGADVCINYKTEDFVARVKEETNGKGVDVILD 217
            A+Q+ K +   V +   S  K  A +  G    I+Y T D+V  V+ +    GVD++LD
Sbjct: 193 AAVQLCKTVPGVVVIGTASSAKHDAIRENGVTHAIDYSTSDYVQEVR-KIYPDGVDLVLD 251

Query: 218 NIGGLYLQRNLNSLAVDGRLFIIGFQGGAVTE-----VNLQPMLARRLTIQAAGL--RNR 270
            + G    +    L   GR  I+ F   +++      VN      + LT+ A  +   N+
Sbjct: 252 PLNGENSIKGFGLLKPFGR--IVHFGAASISSESRSLVNAFKAWWKCLTVNALDIMSENK 309

Query: 271 SLDNKA---LIVSEVEKNVWPAVV--------QGKVKPVIYKTFPLSEAAEAHKLMEESS 319
           S+       L+ ++V +++    +        +G +K  +   +  ++  EA K M    
Sbjct: 310 SVSGYHMGYLVPNQVCRDILNTDIKILLDLYEKGVIKIKVDSVYSYTKIGEAMKRMHGRQ 369

Query: 320 HIGKILLIP 328
           +IGKILL P
Sbjct: 370 NIGKILLKP 378
>AK060364 
          Length = 332

 Score = 85.9 bits (211), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 77/269 (28%), Positives = 129/269 (47%), Gaps = 16/269 (5%)

Query: 65  LECSGTILALGPNVPSRWAVGDQVCALLSSGGYAEKVVVPAGQLLPVPEGVSLTDAAGLP 124
           LE  G ++ +G  V + + +GD + A    G + E + VPA     VP      D + LP
Sbjct: 66  LEGVGEVVTVGEGVEN-FKIGDAI-AYQKMGAFTEYIAVPAATAHKVPA----IDPSVLP 119

Query: 125 EVACTVWSTVFV--TSHLSPSESFLIHGGSSGIGTFAIQIAKHLGIKVFVTAGSEEKLAA 182
            +   + + V +     +   E+ L+   + G G F +Q+AK  G  V  T  S+EK   
Sbjct: 120 VLVQGISAAVALEQVGEMKSGETVLVTAAAGGAGQFVVQLAKLAGNHVIGTTSSDEKAEV 179

Query: 183 CKGLGADVCINYKTEDFVARVKEETNGKGVDVILDNIGGLYLQRNLNSLAVDGRLFIIGF 242
            K LG D  INY  ED    +K E   KGVD++ D +GG   +  + ++AV GRL + G 
Sbjct: 180 LKELGCDRVINYNKEDIDTVLKTEYP-KGVDLVFDTVGGETFKAAVQNIAVRGRLIVFGN 238

Query: 243 QGGAVTEVN-LQPMLARR----LTIQAAGLRNRSLDNKALIVSEVEKNVWPAVVQGKVKP 297
             G + +    +P+L+ +    L  +A+ +R  +L   A  +      ++  + +GK+KP
Sbjct: 239 ISGYLEDHKAAEPLLSSQVNAILLDRASSVRGFNLSKFADRIPVNLAKLFQLINEGKLKP 298

Query: 298 VIYKT--FPLSEAAEAHKLMEESSHIGKI 324
            + KT    L   A+A + M    ++GK+
Sbjct: 299 GVDKTEFRGLEGIADAIEYMFARKNVGKL 327
>Os09g0459800 Similar to ARP protein
          Length = 634

 Score = 84.0 bits (206), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 72/216 (33%), Positives = 101/216 (46%), Gaps = 23/216 (10%)

Query: 39  AGVNRADTVQRQGRXXXXXXXXXXXXL------ECSGTILALGPNVPSRWAVGDQVCALL 92
           AGVN +D     GR            L      E  G + ++G +V +   VG  V AL+
Sbjct: 327 AGVNASDVNFSAGRYFSGGAKETAARLPLDAGFEAVGIVASVGDSV-NHIKVGSPV-ALM 384

Query: 93  SSGGYAEKVVVPAGQLLPVPEGVSLTDAAGLPEVACTVWSTVFVT------SHLSPSESF 146
             G Y+E   VPA  LLPVP      D    PEV   + S +  +        ++  +  
Sbjct: 385 IFGAYSEFTQVPAKHLLPVPR----PD----PEVVAMLTSGLTASIALEKAGQMASGQVV 436

Query: 147 LIHGGSSGIGTFAIQIAKHLGIKVFVTAGSEEKLAACKGLGADVCINYKTEDFVARVKEE 206
           L+   + G G FA+Q+AK  G KV  T G + K A    LG D  INY+ E     +K+E
Sbjct: 437 LVTAAAGGTGQFAVQLAKLAGNKVVATCGGKCKAALLSSLGVDRVINYQNEKIKDVLKKE 496

Query: 207 TNGKGVDVILDNIGGLYLQRNLNSLAVDGRLFIIGF 242
              +G D+I +++GG      LN+LAV GRL +IG 
Sbjct: 497 FP-RGADIIYESVGGEMFDLCLNALAVHGRLIVIGM 531
>Os04g0359100 Alcohol dehydrogenase superfamily, zinc-containing protein
          Length = 332

 Score = 68.6 bits (166), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 82/303 (27%), Positives = 134/303 (44%), Gaps = 32/303 (10%)

Query: 38  AAGVNRADTVQRQGRXXXXXXXXXXXXLE-CSGTILALGPNVPSRWAVGDQVCALL---S 93
           AA +N++D + ++G             +   SG I+ +G  V   + VGD+V + L   +
Sbjct: 46  AASINQSDLMTQKGMMRPFHPKFPFIPVNNVSGEIVEVGSAV-REFKVGDKVVSKLDFWT 104

Query: 94  SGGYAEKVVVPAGQLLPVPEGVSLTDAAGLPEVACTVWS------TVFVTSHLSPSESFL 147
           +GG AE V       +  P G+S  DAAG+P    T         T F  S  S     L
Sbjct: 105 AGGLAEYVATSDKLTVARPAGISAADAAGVPVAGLTALQALKAIGTKFDGSGTSGGADVL 164

Query: 148 IHGGSSGIGTFAIQIAKHLGIKVFVTAGSEEKLAACKGLGADVCINYKTEDFVARVKEET 207
           I   SSG+GT+A+Q+AK    +V  T G+   L    GLGAD  ++YKT +  A      
Sbjct: 165 ITAASSGVGTYAVQLAKLGNHRVTATCGARN-LGLVAGLGADEVLDYKTPEGAAL--SSP 221

Query: 208 NGKGVDVILD----NIGGLYLQRNLNSLAVDGRLFIIGFQGGAVTEVNLQPMLARRLTIQ 263
           +GK  D I++    N   ++  R    L+  GR+  +    G     ++  + +RR  + 
Sbjct: 222 SGKKYDYIVNISNKNKWSVFKPR----LSSHGRVVDVAPNFGNFV-ASVVTLFSRRKKLS 276

Query: 264 AAGLRNRSLDNKALIVSEVEKNVWPAVVQGKVKPVIYKTFPLSEAAEAHKLMEESSHIGK 323
              L+    D   L+  E+ +       +GK++ V+    P  +AA+A          GK
Sbjct: 277 LVSLKMSKEDLGLLL--ELMR-------EGKLRTVVDSRHPFEKAADAWARSLSGHATGK 327

Query: 324 ILL 326
           +++
Sbjct: 328 VIV 330
>Os08g0379400 Similar to Quinone oxidoreductase-like protein
          Length = 390

 Score = 67.4 bits (163), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 85/306 (27%), Positives = 129/306 (42%), Gaps = 48/306 (15%)

Query: 37  SAAGVNRADTVQRQGRXXXXXXXXXXXX-LECSGTILALGPNVPSRWAVGDQVCALLS-- 93
           +AA +N  D  +R G+              + +G ++  G  V      GD+V   +S  
Sbjct: 117 AAAALNPVDAKRRAGKFKATDSPLPTVPGYDVAGVVVKAGRKV-KGLKEGDEVYGNISEK 175

Query: 94  -------SGGYAEKVVVPAGQLLPVPEGVSLTDAAGLPEVACTVWSTVFVTSHLSPSESF 146
                  SG  AE   V    L   P+ +    AAGLP +A          +  S  +S 
Sbjct: 176 ALEGPKQSGSLAEYTAVEEKLLALKPKSLGFAQAAGLP-LAIETAHEGLERAGFSAGKSI 234

Query: 147 LIHGGSSGIGTFAIQIAKHL--GIKVFVTAGSEEKLAACKGLGADVCINYKTEDFVARVK 204
           LI GG+ G+G+ AIQ+AKH+    KV  TA S  KL   K LGADV I+Y  E+F     
Sbjct: 235 LILGGAGGVGSLAIQLAKHVYGASKVAATA-STPKLELLKSLGADVAIDYTKENF----- 288

Query: 205 EETNGKGVDVILDNIGGLYLQRNLNSLAVDGRLFIIGFQGGAVTEVNLQPMLARRLTIQA 264
           E+   K  DV+LD +G    ++ +  +   G + ++    GAV           R  + +
Sbjct: 289 EDLPDK-YDVVLDAVG--QGEKAVKVVKEGGSVVVL---TGAVVPPGF------RFVVTS 336

Query: 265 AGLRNRSLDNKALIVSEVEKNVWPAVVQGKVKPVIYKT--FPLSEAAEAHKLMEESSHIG 322
            G               V + + P +  GKVKP++     F  S+  EA   +E     G
Sbjct: 337 DG--------------SVLEKLNPYLESGKVKPLVDPKGPFAFSQVVEAFSYLETGRATG 382

Query: 323 KILLIP 328
           K+++ P
Sbjct: 383 KVVISP 388
>AK061134 
          Length = 329

 Score = 65.9 bits (159), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 51/156 (32%), Positives = 77/156 (49%), Gaps = 9/156 (5%)

Query: 65  LECSGTILALGPNVPSRWAVGDQV---CALLSSGGYAEKVVVPAGQLLPVPEGVSLTDAA 121
            + +G ++ +G    + + VGD V    A  ++G   E +V  A  L   P  V    AA
Sbjct: 79  FDFAGEVVEVGAEA-TAFKVGDAVYGKAARDAAGSLGEFLVTHAELLAHKPTTVDFDHAA 137

Query: 122 GLPEVACTVWSTVFVTSHLSPSESFLIHGGSSGIGTFAIQIAKHLGIKVFVTAGSEEKLA 181
           G+P VA T +  +   + L P E  L+ GGSS  G F IQ AK LG  V  T  S + +A
Sbjct: 138 GVPGVALTSYQALREHAKLQPGERVLVLGGSSSTGIFGIQYAKALGAFVVATT-STKNVA 196

Query: 182 ACKGLGADVCINYKTEDFVARVKEETNGKGVDVILD 217
             + LG D  I+Y+T+ +   V+  +    +DV+ D
Sbjct: 197 FVQALGTDDVIDYRTQQWSKLVEAHS----IDVVYD 228
  Database: rap3
    Posted date:  Nov 19, 2010  6:03 PM
  Number of letters in database: 17,035,801
  Number of sequences in database:  52,214
  
Lambda     K      H
   0.318    0.135    0.390 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 10,227,546
Number of extensions: 431577
Number of successful extensions: 900
Number of sequences better than 1.0e-10: 15
Number of HSP's gapped: 887
Number of HSP's successfully gapped: 15
Length of query: 328
Length of database: 17,035,801
Length adjustment: 101
Effective length of query: 227
Effective length of database: 11,762,187
Effective search space: 2670016449
Effective search space used: 2670016449
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 156 (64.7 bits)