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Os03g0101600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Quinone oxidoreductase.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 13.2 (0.0129) R2 : 0.209
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.298 (0.0272) R2dN8 : 0.269 R2N8 : 0.209
σ : 0.243
deviance : 27.17
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
16.8 0.193 13.2 0.397 0.241 -0.539 0.332 -0.447 0.251 3.37 25.9 10 -- --
17.07 0.194 13.2 0.326 0.233 -0.506 0.159 -- 0.237 3.3 25.9 10 -- --
17.05 0.194 13.2 0.36 0.234 -0.524 -- -0.236 0.244 3.12 25.8 10 -- --
17.14 0.193 13.2 0.324 0.232 -0.51 -- -- 0.236 3.15 25.8 5 -- --
19.27 0.204 13.2 0.383 -- -0.438 -- -0.213 0.291 -- 23.68 40 -- --
20.85 0.214 13.2 0.442 0.125 -- 0.302 -- 0.346 5.21 -- -- -- --
21.04 0.215 13.2 0.441 0.128 -- -- -- 0.344 4.54 -- -- -- --
19.31 0.205 13.2 0.357 -- -0.406 -- -- 0.284 -- 24 9 -- --
19.58 0.206 13.2 -- 0.269 -0.633 -- -- 0.173 3.17 26.04 44 -- --
21.92 0.219 13.2 0.446 -- -- -- -- 0.348 -- -- -- -- --
26.17 0.239 13.2 -- 0.136 -- -- -- 0.295 4.46 -- -- -- --
22.41 0.22 13.2 -- -- -0.533 -- -- 0.228 -- 24.05 44 -- --
27.17 0.243 13.2 -- -- -- -- -- 0.298 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 15.32 temperature 30 90 < th dose dependent rect. 16 13
4 15.42 temperature 25 90 < th dose dependent rect. 11 18
9 15.56 temperature 25 90 < th dose dependent rect. 9 20
65 15.75 temperature 25 90 > th dose independent rect. 17 14
72 15.80 temperature 25 270 > th dose independent rect. 15 16
73 15.80 temperature 20 10 > th dose dependent sin 12 NA
76 15.81 temperature 30 90 < th dose dependent rect. 19 10
77 15.82 temperature 25 90 < th dose dependent sin 15 NA
79 15.83 temperature 25 10 < th dose dependent sin 15 NA
114 16.00 temperature 20 270 > th dose dependent rect. 17 14
121 16.03 temperature 25 270 < th dose independent rect. 15 12
259 16.29 temperature 25 270 > th dose independent rect. 15 10
266 16.31 temperature 20 270 > th dose dependent rect. 16 8
277 16.33 temperature 25 270 > th dose independent sin 15 NA
315 16.39 temperature 25 90 > th dose independent sin 13 NA
354 16.46 temperature 30 90 < th dose dependent rect. 21 8
377 16.51 temperature 25 270 < th dose independent sin 15 NA
427 16.57 temperature 25 10 < th dose dependent rect. 6 23
574 16.76 temperature 25 720 > th dose independent rect. 12 13
696 16.91 temperature 25 10 < th dose dependent rect. 13 23
697 16.91 temperature 25 10 < th dose dependent rect. 15 23
698 16.91 temperature 25 10 < th dose dependent rect. 17 23
699 16.92 temperature 25 10 < th dose dependent no NA NA
716 16.93 temperature 25 10 < th dose dependent rect. 16 20
733 16.94 temperature 25 10 < th dose dependent rect. 19 23
734 16.94 temperature 25 10 < th dose dependent rect. 21 23
744 16.95 temperature 25 10 < th dose dependent rect. 23 23
752 16.96 temperature 25 10 < th dose dependent rect. 3 23
769 16.97 temperature 25 30 < th dose dependent rect. 1 23
875 17.09 temperature 25 720 < th dose independent rect. 16 3
906 17.11 temperature 30 720 < th dose dependent rect. 16 3