BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0101600 Os03g0101600|AK069374
(328 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os03g0101600 Similar to Quinone oxidoreductase 669 0.0
Os10g0561100 Similar to Quinone oxidoreductase 502 e-142
AK063662 256 1e-68
AK060364 158 5e-39
Os02g0805600 Similar to Alcohol dehydrogenase, zinc-containing 142 3e-34
AK109117 108 4e-24
Os09g0459800 Similar to ARP protein 94 2e-19
Os09g0502500 Alcohol dehydrogenase superfamily, zinc-contai... 72 8e-13
Os01g0753100 Alcohol dehydrogenase superfamily, zinc-contai... 71 1e-12
AK061134 67 2e-11
>Os03g0101600 Similar to Quinone oxidoreductase
Length = 328
Score = 669 bits (1726), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 328/328 (100%), Positives = 328/328 (100%)
Query: 1 MAVVKCIRVHELGGPEVLRWEQVEVGEPKEGEIRIKNTAIGVNFIDVYYRQGVYSAPLPF 60
MAVVKCIRVHELGGPEVLRWEQVEVGEPKEGEIRIKNTAIGVNFIDVYYRQGVYSAPLPF
Sbjct: 1 MAVVKCIRVHELGGPEVLRWEQVEVGEPKEGEIRIKNTAIGVNFIDVYYRQGVYSAPLPF 60
Query: 61 VPGREAVGVVTAVGPGLTGRKVGDVVAYAGNPMGSYAQEQIIPASVAVPLPPSIDHNTAA 120
VPGREAVGVVTAVGPGLTGRKVGDVVAYAGNPMGSYAQEQIIPASVAVPLPPSIDHNTAA
Sbjct: 61 VPGREAVGVVTAVGPGLTGRKVGDVVAYAGNPMGSYAQEQIIPASVAVPLPPSIDHNTAA 120
Query: 121 AIMLKGMTAHVLLRRVYKVQSGDCVLVHAAAGGVGSLLCQWANALGATVIGTVSNEEKAA 180
AIMLKGMTAHVLLRRVYKVQSGDCVLVHAAAGGVGSLLCQWANALGATVIGTVSNEEKAA
Sbjct: 121 AIMLKGMTAHVLLRRVYKVQSGDCVLVHAAAGGVGSLLCQWANALGATVIGTVSNEEKAA 180
Query: 181 QAAEDGCHHVIIYTKEDVVTRVKEFTAGKGVNVVYDSVGKDTYKGSVECLAWRGMLVSFG 240
QAAEDGCHHVIIYTKEDVVTRVKEFTAGKGVNVVYDSVGKDTYKGSVECLAWRGMLVSFG
Sbjct: 181 QAAEDGCHHVIIYTKEDVVTRVKEFTAGKGVNVVYDSVGKDTYKGSVECLAWRGMLVSFG 240
Query: 241 QSSGRPDPIPLSDLASKSLLVTRPSLMHYTATRDELLESAGEVFANVGSGVLRIRVNHTY 300
QSSGRPDPIPLSDLASKSLLVTRPSLMHYTATRDELLESAGEVFANVGSGVLRIRVNHTY
Sbjct: 241 QSSGRPDPIPLSDLASKSLLVTRPSLMHYTATRDELLESAGEVFANVGSGVLRIRVNHTY 300
Query: 301 PLSQAARAHADLQARKTTGSILLIPDDA 328
PLSQAARAHADLQARKTTGSILLIPDDA
Sbjct: 301 PLSQAARAHADLQARKTTGSILLIPDDA 328
>Os10g0561100 Similar to Quinone oxidoreductase
Length = 331
Score = 502 bits (1293), Expect = e-142, Method: Compositional matrix adjust.
Identities = 230/322 (71%), Positives = 286/322 (88%)
Query: 4 VKCIRVHELGGPEVLRWEQVEVGEPKEGEIRIKNTAIGVNFIDVYYRQGVYSAPLPFVPG 63
VK IRVH++GGPEVL WE+VE+GEP EGEIRIKN AIGVN++D+YYR G++ PLPFVPG
Sbjct: 3 VKAIRVHKIGGPEVLTWEEVEIGEPSEGEIRIKNKAIGVNYVDIYYRTGLHQEPLPFVPG 62
Query: 64 REAVGVVTAVGPGLTGRKVGDVVAYAGNPMGSYAQEQIIPASVAVPLPPSIDHNTAAAIM 123
+EAVGVV+AVGPG+TG +VGDVV YA PMG+Y +EQIIPA++A+P+PPS+DH TAA+++
Sbjct: 63 KEAVGVVSAVGPGVTGIEVGDVVGYADTPMGTYTEEQIIPATLAIPIPPSVDHITAASVL 122
Query: 124 LKGMTAHVLLRRVYKVQSGDCVLVHAAAGGVGSLLCQWANALGATVIGTVSNEEKAAQAA 183
LKGMT +VL+++ +K+Q+G VLVHAAAGGVGSLLCQWANALGATVIGTVS +EKA QAA
Sbjct: 123 LKGMTTYVLVKQAFKIQAGHTVLVHAAAGGVGSLLCQWANALGATVIGTVSTQEKAIQAA 182
Query: 184 EDGCHHVIIYTKEDVVTRVKEFTAGKGVNVVYDSVGKDTYKGSVECLAWRGMLVSFGQSS 243
EDGCHHVIIYT+ED V +V E T+ KGV+VVYD+VGKDT+KGS+ECL RG ++S+GQ S
Sbjct: 183 EDGCHHVIIYTEEDFVAQVAEITSRKGVHVVYDAVGKDTFKGSMECLMPRGCMISYGQCS 242
Query: 244 GRPDPIPLSDLASKSLLVTRPSLMHYTATRDELLESAGEVFANVGSGVLRIRVNHTYPLS 303
GRPDP+P+SDLASKSL++ RP + HYTATRDELL +AGEVFA V +GVLR+RVNH YPL
Sbjct: 243 GRPDPVPVSDLASKSLILGRPGMRHYTATRDELLHAAGEVFAGVAAGVLRVRVNHVYPLH 302
Query: 304 QAARAHADLQARKTTGSILLIP 325
+AARAHADL+AR+T+GS++L+P
Sbjct: 303 EAARAHADLEARRTSGSVVLLP 324
>AK063662
Length = 374
Score = 256 bits (655), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 140/330 (42%), Positives = 206/330 (62%), Gaps = 12/330 (3%)
Query: 4 VKCIRVHELGGPEVLRWE-QVEVGEPKEGEIRIKNTAIGVNFIDVYYRQGVYSAP-LPFV 61
+K + + + GG +VL+++ V V EP+EGE+ +KN IG+N+ID Y+R GVY P P++
Sbjct: 49 MKAVYIEKTGGTDVLQYKTDVPVPEPQEGEVLVKNDFIGINYIDTYFRSGVYKPPKFPYI 108
Query: 62 PGREAVGVVTAVGPGL-TGRKVGDVVAYAGNPMGSYAQEQIIP--ASVAVPLPPSIDHNT 118
GRE G + AVGP + + VG V Y MG YA + +P A+ +PLP SID T
Sbjct: 109 LGREGAGTIAAVGPNVPSDLTVGTRVGY----MGQYAYAEYVPVAATYTIPLPDSIDSKT 164
Query: 119 AAAIMLKGMTAHVLLRRVYKVQSGDCVLVHAAAGGVGSLLCQWANALGATVIGTVSNEEK 178
AAA +L+ +TA L+R Y VQ GD +LV AAAGGVG LCQ A+GA VI + S EEK
Sbjct: 165 AAASILQALTAITLIRDAYPVQKGDWILVTAAAGGVGLWLCQLLRAIGARVIASASTEEK 224
Query: 179 AAQAAEDGCHHVIIYTKED---VVTRVKEFTAGKGVNVVYDSVGKDTYKGSVECLAWRGM 235
A E+G V+ Y +ED V +V E T G+GV+ V+DSVGK T+ S+ + +G
Sbjct: 225 RNLAKENGAEFVLGYYEEDRDQFVKKVLEITGGEGVHAVFDSVGKATFDSSLATIRRKGS 284
Query: 236 LVSFGQSSGRPDPIPLSDLASKSLLVTRPSLMHYTATRDELLESAGEVFANVGSGVLRIR 295
++SFG +SG + L+ L++K+L + R +L ++ TR+E L++A E++ + L ++
Sbjct: 285 MISFGNASGPVEGFALARLSAKNLKLMRTTLFNFIVTREETLKAAEELWKLIEKDGLNVK 344
Query: 296 VNHTYPLSQAARAHADLQARKTTGSILLIP 325
++ YPL RA D++ RKTTG +LL P
Sbjct: 345 IHEVYPLEDIVRATQDIEGRKTTGKLLLKP 374
>AK060364
Length = 332
Score = 158 bits (400), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 112/311 (36%), Positives = 171/311 (54%), Gaps = 16/311 (5%)
Query: 21 EQVEVGEPKEGEIRIKNTAIGVNFIDVYYRQGVYSAPLPFVPGREAVGVVTAVGPGLTGR 80
E E+ EG + +KN +G+N DV G+Y PLPF G E VG V VG G+
Sbjct: 23 EVTELPAAAEGHVVVKNHYVGINATDVIITNGLYDRPLPFSCGLEGVGEVVTVGEGVENF 82
Query: 81 KVGDVVAYAGNPMGSYAQEQIIPASVAVPLPPSIDHNTAAAIMLKGMTAHVLLRRVYKVQ 140
K+GD +AY MG++ + +PA+ A +P +ID + ++++G++A V L +V +++
Sbjct: 83 KIGDAIAY--QKMGAFTEYIAVPAATAHKVP-AIDP-SVLPVLVQGISAAVALEQVGEMK 138
Query: 141 SGDCVLVHAAAGGVGSLLCQWANALGATVIGTVSNEEKAAQAAEDGCHHVIIYTKEDVVT 200
SG+ VLV AAAGG G + Q A G VIGT S++EKA E GC VI Y KED+ T
Sbjct: 139 SGETVLVTAAAGGAGQFVVQLAKLAGNHVIGTTSSDEKAEVLKELGCDRVINYNKEDIDT 198
Query: 201 RVK-EFTAGKGVNVVYDSVGKDTYKGSVECLAWRGMLVSFGQSSGRPD----PIPLSDLA 255
+K E+ KGV++V+D+VG +T+K +V+ +A RG L+ FG SG + PL
Sbjct: 199 VLKTEYP--KGVDLVFDTVGGETFKAAVQNIAVRGRLIVFGNISGYLEDHKAAEPLLSSQ 256
Query: 256 SKSLLVTRPSL---MHYTATRDELLESAGEVFANVGSGVLRIRVNHT--YPLSQAARAHA 310
++L+ R S + + D + + ++F + G L+ V+ T L A A
Sbjct: 257 VNAILLDRASSVRGFNLSKFADRIPVNLAKLFQLINEGKLKPGVDKTEFRGLEGIADAIE 316
Query: 311 DLQARKTTGSI 321
+ ARK G +
Sbjct: 317 YMFARKNVGKL 327
>Os02g0805600 Similar to Alcohol dehydrogenase, zinc-containing
Length = 328
Score = 142 bits (359), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 112/334 (33%), Positives = 163/334 (48%), Gaps = 18/334 (5%)
Query: 4 VKCIRVHELGGPEVLRWEQVEVGE----PKEGEIRIKNTAIGVNFIDVYYRQGVYSAP-- 57
++ + + GGPEVL E+ +VGE P EGE+ + +A GVN D RQG Y AP
Sbjct: 1 MRAVVIARAGGPEVL--EERDVGEGLPPPGEGEVLVGVSAAGVNRADTVQRQGRYPAPPG 58
Query: 58 -LPFVPGREAVGVVTAVGPGLTGR-KVGDVVAYAGNPMGSYAQEQIIPASVAVPLPPSID 115
P+ PG E G + A+GP + R VGD V A G YA++ ++PA +P+P +
Sbjct: 59 ASPY-PGLECSGTILALGPNVPSRWAVGDQVC-ALLSSGGYAEKVVVPAGQLLPVPEGVS 116
Query: 116 HNTAAAIMLKGMTAHVLLRRVYKVQSGDCVLVHAAAGGVGSLLCQWANALGATVIGTVSN 175
AA + T + + + L+H + G+G+ Q A LG V T +
Sbjct: 117 LTDAAGLPEVACTVWSTVFVTSHLSPSESFLIHGGSSGIGTFAIQIAKHLGIKVFVTAGS 176
Query: 176 EEKAAQAAEDGCHHVIIYTKEDVVTRVKEFTAGKGVNVVYDSVGKDTYKGSVECLAWRGM 235
EEK A G I Y ED V RVKE T GKGV+V+ D++G + ++ LA G
Sbjct: 177 EEKLAACKGLGADVCINYKTEDFVARVKEETNGKGVDVILDNIGGLYLQRNLNSLAVDGR 236
Query: 236 LVSFGQSSGRPDPIPLSDLASKSLLVTRPSLMHYTATRDELLESAGEVFANVGSGVLRIR 295
L G G + L + ++ L + L + + L+ S EV NV V++ +
Sbjct: 237 LFIIGFQGGAVTEVNLQPMLARRLTIQAAGLRNRSLDNKALIVS--EVEKNVWPAVVQGK 294
Query: 296 VN----HTYPLSQAARAHADLQARKTTGSILLIP 325
V T+PLS+AA AH ++ G ILLIP
Sbjct: 295 VKPVIYKTFPLSEAAEAHKLMEESSHIGKILLIP 328
>AK109117
Length = 493
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 94/321 (29%), Positives = 152/321 (47%), Gaps = 28/321 (8%)
Query: 29 KEGEIRIKNTAIGVNFIDVYYRQGVY--SAPLPFVPGREAVGVVTAVGPGLTGRKVGD-V 85
KE I ++ A G+NF ++ RQG+Y S P+ PG EA G+V VG +T KV D V
Sbjct: 64 KEEFISVRVKAAGLNFAELMQRQGLYRPSNKCPYTPGFEAAGIVEQVGSAVTDFKVDDRV 123
Query: 86 VAYAGNPMGSYAQEQIIPASVAVPLPPSIDHNTAAAIMLKGMTAHVLLRRVYKVQSGDCV 145
+ + G+ G + + A+ +P ++ A+ ++ +TA+ +L R+ ++ + V
Sbjct: 124 IVFNGS--GMWKDVVTVTQKNAIKMPDNMSFEDGASFIVNYLTAYQVLFRMGNLKPNEVV 181
Query: 146 LVHAAAGGVGSLLCQWANAL-GATVIGTVSNEEKAAQAAEDGCHHVIIYTKEDVVTRVKE 204
L+H AAGGVG+ Q + G VIGT S+ + A E+G H I Y+ D V V++
Sbjct: 182 LIHMAAGGVGTAAVQLCKTVPGVVVIGTASSAKHDA-IRENGVTHAIDYSTSDYVQEVRK 240
Query: 205 FTAGKGVNVVYDSV-GKDTYKGSVECLAWRGMLVSFGQSSGRPDPIPLSDLAS---KSLL 260
GV++V D + G+++ KG L G +V FG +S + L + K L
Sbjct: 241 IYP-DGVDLVLDPLNGENSIKG-FGLLKPFGRIVHFGAASISSESRSLVNAFKAWWKCLT 298
Query: 261 VTRPSLMHYTAT---------------RDELLESAGEVFANVGSGVLRIRVNHTYPLSQA 305
V +M + RD L + GV++I+V+ Y ++
Sbjct: 299 VNALDIMSENKSVSGYHMGYLVPNQVCRDILNTDIKILLDLYEKGVIKIKVDSVYSYTKI 358
Query: 306 ARAHADLQARKTTGSILLIPD 326
A + R+ G ILL PD
Sbjct: 359 GEAMKRMHGRQNIGKILLKPD 379
>Os09g0459800 Similar to ARP protein
Length = 634
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 99/332 (29%), Positives = 154/332 (46%), Gaps = 36/332 (10%)
Query: 19 RWEQVEVGEPKE-GEIRIKNTAIGVNFIDVYYRQGVY--------SAPLPFVPGREAVGV 69
R E+V + P E +K GVN DV + G Y +A LP G EAVG+
Sbjct: 305 RLERVRLRLPVEPHNALVKIIYAGVNASDVNFSAGRYFSGGAKETAARLPLDAGFEAVGI 364
Query: 70 VTAVGPGLTGRKVGDVVAYAGNPMGSYAQEQIIPASVAVPLP---PSIDHNTAAAIMLKG 126
V +VG + KVG VA G+Y++ +PA +P+P P + A++ G
Sbjct: 365 VASVGDSVNHIKVGSPVALM--IFGAYSEFTQVPAKHLLPVPRPDPEV-----VAMLTSG 417
Query: 127 MTAHVLLRRVYKVQSGDCVLVHAAAGGVGSLLCQWANALGATVIGTVSNEEKAAQAAEDG 186
+TA + L + ++ SG VLV AAAGG G Q A G V+ T + KAA + G
Sbjct: 418 LTASIALEKAGQMASGQVVLVTAAAGGTGQFAVQLAKLAGNKVVATCGGKCKAALLSSLG 477
Query: 187 CHHVIIYTKEDVVTRV-KEFTAGKGVNVVYDSVGKDTYKGSVECLAWRGMLVSFG---QS 242
VI Y E + + KEF +G +++Y+SVG + + + LA G L+ G Q
Sbjct: 478 VDRVINYQNEKIKDVLKKEFP--RGADIIYESVGGEMFDLCLNALAVHGRLIVIGMISQY 535
Query: 243 SGRPDPIP-----LSD-LASKSLLVTRPSLMHYTATRDELLESAGEVFANVGSGVLRIRV 296
G P L D + +KS V L+ Y + L+ +++A SG L++ +
Sbjct: 536 QGEHGWKPRNYTGLCDKILAKSQTVAGFFLIQYAHLWQDHLDKLFDLYA---SGKLKVSL 592
Query: 297 N--HTYPLSQAARAHADLQARKTTGSILLIPD 326
+ ++ A A L + K+ G +++ D
Sbjct: 593 DPKKFVGVASAPDAVEYLHSGKSVGKVVVCID 624
>Os09g0502500 Alcohol dehydrogenase superfamily, zinc-containing protein
Length = 340
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 89/332 (26%), Positives = 134/332 (40%), Gaps = 36/332 (10%)
Query: 13 GGPEVLRWEQVEVGEPKEGEIRIKNTAIGVNFIDVYYRQGV----YSAPLPFVPGREAVG 68
GG + L+ +V + PK+GE+ IK A +N +D +++GV PF+P + G
Sbjct: 18 GGAQALKHVEVPIPTPKKGEVLIKMEAGSINQVDWKFQKGVARPFMPNKFPFIPVYDLAG 77
Query: 69 VVTAVGPGLTGRKVGDVVAYAGNP-MGSYAQEQIIPASVAVPLPPSIDHNTAAAIMLKGM 127
V +G G++ KVGD V P G A+ + AS P PP + A + + +
Sbjct: 78 EVVELGRGVSSFKVGDKVIAINFPGGGGLAEYAVAQASRTAPRPPEVSAAVGACLPIAAV 137
Query: 128 TAHVLLRRV---------YKVQSGDCVLVHAAAGGVGSLLCQWANALGATVIGTVSNEEK 178
TA V LR + VLV AA+GGVG Q A+A G V T
Sbjct: 138 TALVALRTAGVSLDAGDGGGGGAKKNVLVTAASGGVGHFAVQLASAAGHRVTATC-GARN 196
Query: 179 AAQAAEDGCHHVIIY-TKEDVVTRVKEFTAGKGVNVVYDSVGKDTYKGSVECLAWRGMLV 237
A G V+ Y T E R YD+V + +V L W
Sbjct: 197 AGLVGGLGADKVLDYATPEGAALRSPS-------GRRYDAV---VHCAAVAGLPWSAFAP 246
Query: 238 SFGQSSGRPDPIP----LSDLASKSLLVTRPSL--MHYTATRDELLESAGEVFANVGSGV 291
+ D P + + + +R L + + T++++ AG V G
Sbjct: 247 VLADAGVVVDLTPGAAAFATALRQRVTFSRKRLVPLFVSPTKEDMELVAG----MVAEGK 302
Query: 292 LRIRVNHTYPLSQAARAHADLQARKTTGSILL 323
LR + +PLS+A A A TG I++
Sbjct: 303 LRAVIESRHPLSRAEEGWARSMAGHATGKIIV 334
>Os01g0753100 Alcohol dehydrogenase superfamily, zinc-containing protein
Length = 365
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 99/352 (28%), Positives = 150/352 (42%), Gaps = 47/352 (13%)
Query: 5 KCIRVHELGGPEVLRWEQ-VEVGEPKEGEIRIKNTAIGVNFIDVYYRQG----VYSAPLP 59
+ + V GGPEVL Q V V + K G++ ++ A+ +N +D+ R G ++ LP
Sbjct: 31 RAVVVPRFGGPEVLEVRQGVPVPDLKPGDVLVRARAVSINPLDLRMRSGYGRSIFEPVLP 90
Query: 60 FVPGREAVGVVTAVGPGLTGRKVGDVVAYAGNPM---GSYAQEQIIPASVAVPLPPSIDH 116
+ GR+ G V A G ++ +G V A +P G+Y I+ P ++ H
Sbjct: 91 LIIGRDISGEVAATGTSVSSFTIGQEVFGALHPTAIRGTYTDYAILSQDELTSKPSTLSH 150
Query: 117 NTAAAIMLKGMTAHVLLRRVYKVQSGDCVLVHAAAGGVGSLLCQWANALGATV---IGTV 173
A+AI +TA L ++ G VLV G VG Q A A G +V GT
Sbjct: 151 VEASAIPFAALTAWRALHGTARISEGQRVLVIGGGGAVGLAAVQLAVAAGCSVSATCGTK 210
Query: 174 SNEEKAAQAAEDGCHHVIIYTKEDVVTRVK-EF-----------TAGKGVNVVYDSVGKD 221
S E+ A AE I YT ED + VK +F T G+NV+
Sbjct: 211 SIEQVLAAGAEKA----IDYTAEDTESAVKGKFDAVLDTIGVPETERIGINVLRRGGHYM 266
Query: 222 TYKGSVECLAWRGMLVSFGQSSGRPDPIPLSDLASKSLLVTRPSLMHYTATRDELL---- 277
T +G LA R +G + G P A+ ++L+ + Y+ D
Sbjct: 267 TLQGEAAALADR-----YGLAVGLP--------AATAVLLKKQMQYRYSHGIDYWWTYMR 313
Query: 278 ---ESAGEVFANVGSGVLRIRVNHTYPLSQAARAHADLQARKTTGSILLIPD 326
E E+ G+G L+I V T+P+S+ AH + R G ++L D
Sbjct: 314 ADSEGLHEIQRLSGAGKLQIPVEKTFPISKVREAHEAKEKRLVPGKVVLEFD 365
>AK061134
Length = 329
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 80/314 (25%), Positives = 127/314 (40%), Gaps = 42/314 (13%)
Query: 28 PKEGEIRIKNTAIGVNFID--------VYYRQGVYSAPLPFVPGREAVGVVTAVGPGLTG 79
P +R+K + +N ID Y G + PF G + G V VG T
Sbjct: 35 PSPSHVRVKVYSASLNPIDYKVVETYGAKYTGGTPTQESPFRIGFDFAGEVVEVGAEATA 94
Query: 80 RKVGDVV--AYAGNPMGSYAQEQIIPASVAVPLPPSIDHNTAAAIMLKGMTAHVLLRRVY 137
KVGD V A + GS + + A + P ++D + AA + +T++ LR
Sbjct: 95 FKVGDAVYGKAARDAAGSLGEFLVTHAELLAHKPTTVDFDHAAGVPGVALTSYQALREHA 154
Query: 138 KVQSGDCVLVHAAAGGVGSLLCQWANALGATVIGTVSNEEKAAQAAEDGCHHVIIYTKED 197
K+Q G+ VLV + G Q+A ALGA V+ T S + A A G VI Y +
Sbjct: 155 KLQPGERVLVLGGSSSTGIFGIQYAKALGAFVVATTSTKNVAFVQAL-GTDDVIDYRTQ- 212
Query: 198 VVTRVKEFTAGKGVNVVYDSVGKDTYKGSVECLAWR-GMLVSFGQSSGR----PDPIPLS 252
+ + ++VVYD VE +W G + +GR +P S
Sbjct: 213 ---QWSKLVEAHSIDVVYDC--------GVEPTSWEDGAQHVLKKDTGRFVTLRRGLPHS 261
Query: 253 DL---ASKSLLVTRPSLMHYTATRDELLESAGEVFANVGSGVLRIRVNHTYPLSQAARAH 309
D A+ S RPS A + + +G +++ ++ +PL A
Sbjct: 262 DAKFGATYSAPFARPSGQDLAA-----------IATLIDAGKIKLFIDSVFPLESTREAF 310
Query: 310 ADLQARKTTGSILL 323
A L+ + G +++
Sbjct: 311 ARLKTERAVGKVIV 324
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.318 0.134 0.395
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 11,668,121
Number of extensions: 508162
Number of successful extensions: 1318
Number of sequences better than 1.0e-10: 13
Number of HSP's gapped: 1305
Number of HSP's successfully gapped: 13
Length of query: 328
Length of database: 17,035,801
Length adjustment: 101
Effective length of query: 227
Effective length of database: 11,762,187
Effective search space: 2670016449
Effective search space used: 2670016449
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 156 (64.7 bits)