Os01g0753100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Alcohol dehydrogenase superfamily, zinc-containing protein.
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Os01g0753100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Alcohol dehydrogenase superfamily, zinc-containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 42.3 | 0.306 | 12 | 0.0308 | 1.44 | -0.736 | 0.401 | -0.329 | -0.14 | 7.23 | 49 | 10 | -- | -- |
| 42.44 | 0.303 | 12 | 0.0265 | 1.43 | -0.763 | 0.41 | -- | -0.14 | 7.23 | 47.99 | 6 | -- | -- |
| 42.63 | 0.304 | 12 | 0.0393 | 1.44 | -0.75 | -- | -0.331 | -0.139 | 7.19 | 49 | 6 | -- | -- |
| 42.89 | 0.305 | 12 | 0.0309 | 1.43 | -0.797 | -- | -- | -0.141 | 7.23 | 44.99 | 6 | -- | -- |
| 147.86 | 0.569 | 12 | 0.0531 | -- | -0.515 | -- | -0.183 | -0.114 | -- | 39.71 | 3 | -- | -- |
| 50.63 | 0.334 | 12 | 0.0256 | 1.37 | -- | 0.368 | -- | -0.124 | 8.41 | -- | -- | -- | -- |
| 51.05 | 0.335 | 12 | 0.0367 | 1.37 | -- | -- | -- | -0.124 | 8.4 | -- | -- | -- | -- |
| 147.92 | 0.569 | 12 | 0.0507 | -- | -0.522 | -- | -- | -0.114 | -- | 39.85 | 5 | -- | -- |
| 42.92 | 0.305 | 12 | -- | 1.43 | -0.808 | -- | -- | -0.144 | 7.23 | 44.28 | 6 | -- | -- |
| 154.84 | 0.581 | 12 | 0.0442 | -- | -- | -- | -- | -0.11 | -- | -- | -- | -- | -- |
| 51.09 | 0.334 | 12 | -- | 1.37 | -- | -- | -- | -0.128 | 8.4 | -- | -- | -- | -- |
| 147.99 | 0.568 | 12 | -- | -- | -0.521 | -- | -- | -0.12 | -- | 39.83 | 2 | -- | -- |
| 154.89 | 0.581 | 12 | -- | -- | -- | -- | -- | -0.115 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 40.87 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 2 | 41.02 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 3 | 41.24 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 11 | 1 |
| 4 | 41.57 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 10 | 4 |
| 5 | 41.64 | humidity | 50.0 | 10 | > th | dose dependent | rect. | 21 | 23 |
| 7 | 41.75 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 10 | 4 |
| 10 | 41.81 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 10 | 4 |
| 11 | 41.81 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 7 | 12 |
| 14 | 41.88 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 7 | 8 |
| 20 | 42.01 | humidity | 60.0 | 10 | > th | dose dependent | rect. | 10 | 10 |
| 29 | 42.12 | humidity | 90.0 | 720 | < th | dose dependent | rect. | 10 | 6 |
| 38 | 42.23 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 7 | 8 |
| 39 | 42.23 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 50 | 42.31 | humidity | 50.0 | 10 | > th | dose dependent | no | NA | NA |
| 53 | 42.32 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 7 | 21 |
| 56 | 42.33 | humidity | 60.0 | 90 | > th | dose dependent | rect. | 11 | 8 |
| 64 | 42.38 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 23 | 20 |
| 66 | 42.39 | precipitation | 0.1 | 270 | < th | dose independent | sin | 2 | NA |
| 68 | 42.39 | precipitation | 0.1 | 270 | < th | dose dependent | sin | 2 | NA |
| 75 | 42.44 | precipitation | 0.1 | 270 | > th | dose dependent | sin | 2 | NA |
| 82 | 42.46 | humidity | 60.0 | 10 | > th | dose dependent | rect. | 7 | 23 |
| 90 | 42.50 | precipitation | 0.1 | 270 | > th | dose independent | sin | 2 | NA |
| 96 | 42.52 | humidity | 50.0 | 10 | > th | dose dependent | rect. | 15 | 23 |
| 103 | 42.56 | humidity | 50.0 | 10 | > th | dose dependent | rect. | 13 | 23 |
| 109 | 42.58 | humidity | 80.0 | 720 | < th | dose dependent | rect. | 6 | 11 |
| 124 | 42.61 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 1 | 18 |
| 135 | 42.63 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 23 | 20 |
| 143 | 42.66 | humidity | 80.0 | 720 | < th | dose dependent | rect. | 20 | 21 |
| 144 | 42.66 | humidity | 60.0 | 10 | > th | dose dependent | rect. | 11 | 23 |
| 163 | 42.70 | humidity | 50.0 | 720 | > th | dose dependent | sin | 23 | NA |
| 198 | 42.79 | humidity | 90.0 | 720 | < th | dose dependent | sin | 23 | NA |
| 199 | 42.79 | humidity | 80.0 | 720 | < th | dose dependent | sin | 1 | NA |
| 206 | 42.81 | humidity | 80.0 | 1440 | < th | dose independent | sin | 2 | NA |
| 274 | 42.94 | humidity | 90.0 | 720 | < th | dose dependent | rect. | 10 | 11 |
| 333 | 43.03 | humidity | 80.0 | 1440 | > th | dose independent | sin | 2 | NA |
| 412 | 43.12 | humidity | 90.0 | 10 | < th | dose dependent | rect. | 6 | 19 |
| 415 | 43.12 | humidity | 90.0 | 10 | < th | dose dependent | rect. | 3 | 22 |
| 427 | 43.14 | humidity | 60.0 | 10 | > th | dose dependent | rect. | 1 | 23 |
| 478 | 43.19 | humidity | 90.0 | 10 | < th | dose dependent | rect. | 6 | 16 |
| 486 | 43.20 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 23 | 20 |
| 501 | 43.21 | humidity | 90.0 | 10 | < th | dose dependent | rect. | 3 | 19 |
| 523 | 43.22 | humidity | 80.0 | 720 | < th | dose dependent | rect. | 10 | 23 |
| 525 | 43.23 | humidity | 80.0 | 10 | > th | dose independent | rect. | 11 | 9 |
| 566 | 43.24 | humidity | 90.0 | 10 | < th | dose dependent | rect. | 6 | 22 |
| 568 | 43.24 | humidity | 70.0 | 10 | > th | dose dependent | rect. | 17 | 23 |
| 611 | 43.27 | humidity | 80.0 | 720 | < th | dose dependent | no | NA | NA |
| 652 | 43.30 | humidity | 90.0 | 10 | < th | dose dependent | rect. | 23 | 23 |
| 684 | 43.33 | humidity | 90.0 | 10 | < th | dose dependent | no | NA | NA |
| 710 | 43.34 | humidity | 90.0 | 10 | < th | dose dependent | rect. | 11 | 23 |
| 858 | 43.44 | radiation | 1.0 | 90 | < th | dose independent | rect. | 21 | 23 |
| 900 | 43.47 | humidity | 70.0 | 720 | > th | dose independent | rect. | 23 | 20 |
| 971 | 43.52 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 13 | 5 |
| 972 | 43.52 | humidity | 70.0 | 720 | > th | dose independent | rect. | 1 | 18 |
| 976 | 43.52 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 13 | 5 |
| 982 | 43.52 | radiation | 10.0 | 90 | < th | dose dependent | rect. | 21 | 23 |
| 997 | 43.54 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 13 | 5 |