BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0753100 Os01g0753100|AK067136
(365 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G15090.1 | chr3:5076847-5078870 FORWARD LENGTH=367 498 e-141
AT1G23740.1 | chr1:8398245-8399656 REVERSE LENGTH=387 97 1e-20
AT4G13010.1 | chr4:7600682-7602567 FORWARD LENGTH=330 77 1e-14
AT5G61510.1 | chr5:24737084-24738975 REVERSE LENGTH=407 77 2e-14
AT4G21580.1 | chr4:11475822-11477514 FORWARD LENGTH=326 69 5e-12
AT3G56460.1 | chr3:20933029-20934425 REVERSE LENGTH=349 66 3e-11
>AT3G15090.1 | chr3:5076847-5078870 FORWARD LENGTH=367
Length = 366
Score = 498 bits (1281), Expect = e-141, Method: Compositional matrix adjust.
Identities = 233/335 (69%), Positives = 278/335 (82%)
Query: 30 CRAVVVPRFGGPEVLEVRQGVPVPDLKPGDVLVRARAVSINPLDLRMRSGYGRSIFEPVL 89
CRAV++PRFGGPEV E+R+ VPVP+L P +VLV+A+AVS+NPLD R+R+GYGRS+F+P L
Sbjct: 32 CRAVILPRFGGPEVFELRENVPVPNLNPNEVLVKAKAVSVNPLDCRIRAGYGRSVFQPHL 91
Query: 90 PLIIGRDISGEVAATGTSVSSFTIGQEVFGALHPTAIRGTYTDYAILSQDELTSKPSTLS 149
P+I+GRD+SGEVAA GTSV S +GQEVFGALHPTA+RGTYTDY ILS+DELT KPS++S
Sbjct: 92 PIIVGRDVSGEVAAIGTSVKSLKVGQEVFGALHPTALRGTYTDYGILSEDELTEKPSSIS 151
Query: 150 HVEASAIPFAALTAWRALHGTARISEGQRXXXXXXXXXXXXXXXXXXXXXXCSVSATCGT 209
HVEASAIPFAALTAWRAL ARI+EGQR C V+A+C
Sbjct: 152 HVEASAIPFAALTAWRALKSNARITEGQRLLVFGGGGAVGFSAIQLAVASGCHVTASCVG 211
Query: 210 KSIEQVLAAGAEKAIDYTAEDTESAVKGKFDAVLDTIGVPETERIGINVLRRGGHYMTLQ 269
++ +++LAAGAE+A+DYT ED E AVKGKFDAVLDTIG PETERIGIN LR+GG+YMTLQ
Sbjct: 212 QTKDRILAAGAEQAVDYTTEDIELAVKGKFDAVLDTIGGPETERIGINFLRKGGNYMTLQ 271
Query: 270 GEAAALADRYGLAVGLPAATAVLLKKQMQYRYSHGIDYWWTYMRADSEGLHEIQRLSGAG 329
GEAA+L D+YG VGLP AT++L+KK++QY+YSHGIDYWWTYMRAD EGL EIQRL GAG
Sbjct: 272 GEAASLTDKYGFVVGLPLATSLLMKKKIQYQYSHGIDYWWTYMRADPEGLAEIQRLVGAG 331
Query: 330 KLQIPVEKTFPISKVREAHEAKEKRLVPGKVVLEF 364
KL+IPVEKTFPI+ V AHEAKEK+ +PGKVVLEF
Sbjct: 332 KLKIPVEKTFPITDVVAAHEAKEKKQIPGKVVLEF 366
>AT1G23740.1 | chr1:8398245-8399656 REVERSE LENGTH=387
Length = 386
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/250 (28%), Positives = 118/250 (47%), Gaps = 13/250 (5%)
Query: 28 KSCRAVVVPRFGGPEVLEVRQGVPVPDLKPGDVLVRARAVSINPLDLRMRSGYGRSIFEP 87
K +A V +GG +VL++ + VP++K VL++ A ++NP+D + R G ++ P
Sbjct: 76 KEMKAWVYSDYGGVDVLKLESNIVVPEIKEDQVLIKVVAAALNPVDAKRRQGKFKATDSP 135
Query: 88 VLPLIIGRDISGEVAATGTSVSSFTIGQEVFGALHPTAIR-----GTYTDYAILSQDELT 142
LP + G D++G V G++V G EV+ + A+ G+ +Y + + L
Sbjct: 136 -LPTVPGYDVAGVVVKVGSAVKDLKEGDEVYANVSEKALEGPKQFGSLAEYTAVEEKLLA 194
Query: 143 SKPSTLSHVEASAIPFAALTAWRALHGTARISEGQRXXXXXXX--XXXXXXXXXXXXXXX 200
KP + +A+ +P A TA L T S G+
Sbjct: 195 LKPKNIDFAQAAGLPLAIETADEGLVRT-EFSAGKSILVLNGAGGVGSLVIQLAKHVYGA 253
Query: 201 CSVSATCGTKSIEQVLAAGAEKAIDYTAEDTESAVKGKFDAVLDTIGVPETERIGINVLR 260
V+AT T+ +E V + GA+ AIDYT E+ E + K+D V D IG+ + + V++
Sbjct: 254 SKVAATASTEKLELVRSLGADLAIDYTKENIED-LPDKYDVVFDAIGMCDK---AVKVIK 309
Query: 261 RGGHYMTLQG 270
GG + L G
Sbjct: 310 EGGKVVALTG 319
>AT4G13010.1 | chr4:7600682-7602567 FORWARD LENGTH=330
Length = 329
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 103/220 (46%), Gaps = 11/220 (5%)
Query: 39 GGPEVLEVRQGVPVPDLKPGDVLVRARAVSINPLDLRMRSGYGRSIFEPVLPLIIGRDIS 98
GG LE Q VPVP K +V ++ A S+NP+D +++ G R P I D++
Sbjct: 16 GGAAGLEHVQ-VPVPTPKSNEVCLKLEATSLNPVDWKIQKGMIRPFLPRKFPCIPATDVA 74
Query: 99 GEVAATGTSVSSFTIGQEVFGALHPTAIRGTYTDYAILSQDELTSKPSTLSHVEASAIPF 158
GEV G+ V +F G +V L G ++A+ ++ +P + EA+A+P
Sbjct: 75 GEVVEVGSGVKNFKAGDKVVAVLSHLG-GGGLAEFAVATEKLTVKRPQEVGAAEAAALPV 133
Query: 159 AALTAWRALHGTARIS---EGQRXXXXXXXXXXXXXXXXXXXXXXCS--VSATCGTKSIE 213
A LTA +AL A + G++ + V+ATCG ++IE
Sbjct: 134 AGLTALQALTNPAGLKLDGTGKKANILVTAASGGVGHYAVQLAKLANAHVTATCGARNIE 193
Query: 214 QVLAAGAEKAIDYTAED---TESAVKGKFDAVLDTI-GVP 249
V + GA++ +DY + +S K+DAV+ G+P
Sbjct: 194 FVKSLGADEVLDYKTPEGAALKSPSGKKYDAVVHCANGIP 233
>AT5G61510.1 | chr5:24737084-24738975 REVERSE LENGTH=407
Length = 406
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 88/343 (25%), Positives = 146/343 (42%), Gaps = 26/343 (7%)
Query: 27 EKSCRAVVVPRFGGPEVLEVRQGVPVPDLKPGDVLVRARAVSINPLDLRMRSGYGRSIFE 86
+K + + V GGPEVL+ + V V + K G++ V+ +A+ +N +D+ R G +++
Sbjct: 81 KKMVKGIRVYEHGGPEVLK-WEDVEVGEPKEGEIRVKNKAIGLNFIDVYFRKG----VYK 135
Query: 87 PV-LPLIIGRDISGEVAATGTSVSSFTIGQEVFGALHPTAIRGTYTDYAILSQDELTSKP 145
P +P G + GEV A G+ ++ IG V A +P G Y + IL D++ P
Sbjct: 136 PASMPFTPGMEAVGEVVAVGSGLTGRMIGDLVAYAGNPM---GAYAEEQILPADKVVPVP 192
Query: 146 STLSHVEASAIPFAALTAWRALHGTARISEGQRXXXXXXXXXXXXXXXXXXXXXXCSVSA 205
S++ + A++I +TA L ++ G +V
Sbjct: 193 SSIDPIVAASIMLKGMTAQFLLRRCFKVEPGHTILVHAAAGGVGSLLCQWANALGATVIG 252
Query: 206 TCGTK-SIEQVLAAGAEKAIDYTAEDTESAVK----GK-FDAVLDTIGVPETERIGINVL 259
T T Q G I Y ED S V GK + V D++G +T + + L
Sbjct: 253 TVSTNEKAAQAKEDGCHHVIMYKNEDFVSRVNDITSGKGVNVVYDSVG-KDTFKGSLACL 311
Query: 260 RRGGHYMTLQGEAAALADRYGLAVGLPAATAVLLKKQMQYRYSHGIDYWWTYMRADSEGL 319
+ G YM G+++ D L+ P ++ L + Y+ D E
Sbjct: 312 KSRG-YMVSFGQSSGSPDPIPLSDLAP--KSLFLTRPSMMHYNETRDELL-------ECA 361
Query: 320 HEIQRLSGAGKLQIPVEKTFPISKVREAHEAKEKRLVPGKVVL 362
E+ +G L+ V +P+S+V +AH E R+ G VVL
Sbjct: 362 GEVFANVTSGILKARVNHKYPLSRVADAHADLENRITSGSVVL 404
>AT4G21580.1 | chr4:11475822-11477514 FORWARD LENGTH=326
Length = 325
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 86/342 (25%), Positives = 140/342 (40%), Gaps = 28/342 (8%)
Query: 31 RAVVVPRFGGPEVLEVRQGVPVPDLKPGDVLVRARAVSINPLDLRMRSGYGRSIFEPVLP 90
+A+V+ G PEVL++R V P++K +VL+R A ++N D R G P
Sbjct: 2 KAIVISEPGKPEVLQLRD-VADPEVKDDEVLIRVLATALNRADTLQRLGLYNP--PPGSS 58
Query: 91 LIIGRDISGEVAATGTSVSSFTIGQEVFGALHPTAIRGTYTDYAILSQDELTSKPSTLSH 150
+G + SG + + G VS + +G +V L G Y + + ++ P+ +S
Sbjct: 59 PYLGLECSGTIESVGKGVSRWKVGDQVCALLS----GGGYAEKVSVPAGQIFPIPAGISL 114
Query: 151 VEASAIPFAALTAWRALHGTARISEGQRXXXXXXXXXXXXXXXXXXXXXXCSVSATCGTK 210
+A+A P A T W + R+S G+ V T G+
Sbjct: 115 KDAAAFPEVACTVWSTVFMMGRLSVGESFLIHGGSSGIGTFAIQIAKHLGVRVFVTAGS- 173
Query: 211 SIEQVLAA----GAEKAIDYTAEDTESAVKGK-----FDAVLDTIGVPETERIGINVLRR 261
++ LAA GA+ I+Y ED + VK + D +LD IG P ++ ++ L
Sbjct: 174 --DEKLAACKELGADVCINYKTEDFVAKVKAETDGKGVDVILDCIGAPYLQK-NLDSLNF 230
Query: 262 GGHYMTLQGEAAALADRYGLAVGLPAATAVLLKKQMQYRYSHGIDYWWTYMRADSEGLHE 321
G + A A+ L+ LP VL R + +
Sbjct: 231 DGRLCIIGLMGGANAE-IKLSSLLPKRLTVL---GAALRPRSPENKAVVVREVEKNVWPA 286
Query: 322 IQRLSGAGKLQIPVEKTFPISKVREAHEAKEKRLVPGKVVLE 363
I+ AGK++ + K P+S+ E H E GK++LE
Sbjct: 287 IE----AGKVKPVIYKYLPLSQAAEGHSLMESSNHIGKILLE 324
>AT3G56460.1 | chr3:20933029-20934425 REVERSE LENGTH=349
Length = 348
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 85/345 (24%), Positives = 137/345 (39%), Gaps = 41/345 (11%)
Query: 39 GGPEV-LEVRQGVPVPDLKPGDVLVRARAVSINPLDLRMRSGYGRSIFEPVLPLIIGRDI 97
G PE +EV + P+P L D VR R ++ + G+ +P LP I G D
Sbjct: 18 GSPESPVEVSKTHPIPSLN-SDTSVRVRVIATSLNYANYLQILGKYQEKPPLPFIPGSDY 76
Query: 98 SGEVAATGTSVSSFTIGQEVFGALHPTAIRGTYTDYAILSQDELTSKPSTLSHVEASAIP 157
SG V A G +V+ F +G V A G++ + + Q L P V A+A+P
Sbjct: 77 SGIVDAIGPAVTKFRVGDRVCS----FADLGSFAQFIVADQSRLFLVPERCDMVAAAALP 132
Query: 158 FAALTAWRALHGTARISEGQRXXXXXXXXXXXXXXXXXXXXXXCSVSATC-GTKSIEQVL 216
A T+ AL AR++ GQ V A GT+ I+ +
Sbjct: 133 VAFGTSHVALVHRARLTSGQVLLVLGAAGGVGLAAVQIGKVCGAIVIAVARGTEKIQLLK 192
Query: 217 AAGAEKAIDYTAEDTESAVK--------GKFDAVLDTIGVPETERIGINVLRRGGHYMTL 268
+ G + +D E+ S+VK D + D +G T+ + VL+ G + +
Sbjct: 193 SMGVDHVVDLGTENVISSVKEFIKTRKLKGVDVLYDPVGGKLTKE-SMKVLKWGAQILVI 251
Query: 269 QGEAAALADRYGLAVG----LPAATAVLLKKQMQYRYSHGIDYWWTYM----RADSEGLH 320
G A G +PA A++ + HG+ YW +Y + +
Sbjct: 252 -----------GFASGEIPVIPANIALVKNWTV-----HGL-YWGSYRIHQPNVLEDSIK 294
Query: 321 EIQRLSGAGKLQIPVEKTFPISKVREAHEAKEKRLVPGKVVLEFD 365
E+ G + I + T+ +S+ A + R GKV++ D
Sbjct: 295 ELLSWLSRGLITIHISHTYSLSQANLAFGDLKDRKAIGKVMIALD 339
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.318 0.134 0.394
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 6,377,571
Number of extensions: 241560
Number of successful extensions: 572
Number of sequences better than 1.0e-05: 6
Number of HSP's gapped: 562
Number of HSP's successfully gapped: 6
Length of query: 365
Length of database: 11,106,569
Length adjustment: 100
Effective length of query: 265
Effective length of database: 8,364,969
Effective search space: 2216716785
Effective search space used: 2216716785
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 112 (47.8 bits)