BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0267200 Os03g0267200|AK069547
(159 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os03g0267200 Low molecular mass heat shock protein Oshsp17.7 267 3e-72
Os03g0266900 Low molecular mass heat shock protein Oshsp17.3 228 1e-60
Os03g0266300 Class I low-molecular-weight heat shock protei... 221 2e-58
Os03g0267000 Low molecular mass heat shock protein Oshsp18.0 216 4e-57
Os01g0136200 16.9 kDa class I heat shock protein 174 2e-44
Os01g0136100 16.9 kDa class I heat shock protein 172 6e-44
Os01g0136000 Similar to Cytosolic class I small heat-shock ... 169 1e-42
Os01g0135800 Similar to Cytosolic class I small heat shock ... 139 1e-33
Os04g0445100 Similar to 22.7 kDa class IV heat shock protei... 101 2e-22
Os02g0128000 Similar to Cytosolic class I small heat shock ... 91 5e-19
Os06g0253100 HSP20-like chaperone domain containing protein 87 8e-18
Os11g0244200 Similar to Pisum sativum 17.9 kDa heat shock p... 79 1e-15
Os02g0217900 Similar to Cytosolic class II small heat shock... 70 7e-13
Os01g0184200 Similar to 17.5 kDa class II heat shock protein 69 1e-12
>Os03g0267200 Low molecular mass heat shock protein Oshsp17.7
Length = 159
Score = 267 bits (682), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 136/159 (85%), Positives = 136/159 (85%)
Query: 1 MSLIRRGNAFDPFSLDLWDPVDGFPFXXXXXXXXXXXLFPRANSDAAAFAGARIDWKETP 60
MSLIRRGNAFDPFSLDLWDPVDGFPF LFPRANSDAAAFAGARIDWKETP
Sbjct: 1 MSLIRRGNAFDPFSLDLWDPVDGFPFGSGGSSSSSGSLFPRANSDAAAFAGARIDWKETP 60
Query: 61 EVHVFKADVPGLKKEEVKVEVDDGNILQISGERSREQEEKSDKWHRVERSSGKFLRRFRL 120
EVHVFKADVPGLKKEEVKVEVDDGNILQISGERSREQEEKSDKWHRVERSSGKFLRRFRL
Sbjct: 61 EVHVFKADVPGLKKEEVKVEVDDGNILQISGERSREQEEKSDKWHRVERSSGKFLRRFRL 120
Query: 121 PENTKPEQIKASMENGVLXXXXXXXXXXXXDVKSIQISG 159
PENTKPEQIKASMENGVL DVKSIQISG
Sbjct: 121 PENTKPEQIKASMENGVLTVTVPKEEPKKPDVKSIQISG 159
>Os03g0266900 Low molecular mass heat shock protein Oshsp17.3
Length = 154
Score = 228 bits (582), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 125/159 (78%), Positives = 131/159 (82%), Gaps = 5/159 (3%)
Query: 1 MSLIRRGNAFDPFSLDLWDPVDGFPFXXXXXXXXXXXLFPRANSDAAAFAGARIDWKETP 60
MS+IRR N FDPFSLDLWDP DGFPF LFPRANSDAAAFAGARIDWKETP
Sbjct: 1 MSMIRRSNVFDPFSLDLWDPFDGFPFGSGSGS-----LFPRANSDAAAFAGARIDWKETP 55
Query: 61 EVHVFKADVPGLKKEEVKVEVDDGNILQISGERSREQEEKSDKWHRVERSSGKFLRRFRL 120
E HVFKADVPGLKKEEVKVEV+DGN+LQISGER +EQEEK+DKWHRVERSSGKFLRRFRL
Sbjct: 56 EAHVFKADVPGLKKEEVKVEVEDGNVLQISGERIKEQEEKTDKWHRVERSSGKFLRRFRL 115
Query: 121 PENTKPEQIKASMENGVLXXXXXXXXXXXXDVKSIQISG 159
PENTKPEQIKASMENGVL DVKSIQI+G
Sbjct: 116 PENTKPEQIKASMENGVLTVTVPKEEPKKPDVKSIQITG 154
>Os03g0266300 Class I low-molecular-weight heat shock protein 17.9
Length = 161
Score = 221 bits (563), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 121/161 (75%), Positives = 128/161 (79%), Gaps = 2/161 (1%)
Query: 1 MSLIRRGNAFDPFSLDLWDPVDGFPFXXXXXXXXXXXLF-PR-ANSDAAAFAGARIDWKE 58
MSLIRR N FDPFSLDLWDP DGFPF PR A+S+ AAFAGARIDWKE
Sbjct: 1 MSLIRRSNVFDPFSLDLWDPFDGFPFGSGGSSSGSIFPSFPRGASSETAAFAGARIDWKE 60
Query: 59 TPEVHVFKADVPGLKKEEVKVEVDDGNILQISGERSREQEEKSDKWHRVERSSGKFLRRF 118
TPE HVFKADVPGLKKEEVKVEVDDGNILQISGER++EQEEK+D+WHRVERSSGKFLRRF
Sbjct: 61 TPEAHVFKADVPGLKKEEVKVEVDDGNILQISGERNKEQEEKTDQWHRVERSSGKFLRRF 120
Query: 119 RLPENTKPEQIKASMENGVLXXXXXXXXXXXXDVKSIQISG 159
RLP+N KPEQIKASMENGVL DVKSIQISG
Sbjct: 121 RLPDNAKPEQIKASMENGVLTVTVPKEEAKKPDVKSIQISG 161
>Os03g0267000 Low molecular mass heat shock protein Oshsp18.0
Length = 161
Score = 216 bits (551), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 121/161 (75%), Positives = 129/161 (80%), Gaps = 2/161 (1%)
Query: 1 MSLIRRGNAFDPFSLDLWDPVDGFPFXXXXXXXXXX-XLFPR-ANSDAAAFAGARIDWKE 58
MSLIRR N FDPFSLDLWDP DGFPF FPR +S+ AAFAGARIDWKE
Sbjct: 1 MSLIRRSNVFDPFSLDLWDPFDGFPFGSGSRSSGSIFPSFPRGTSSETAAFAGARIDWKE 60
Query: 59 TPEVHVFKADVPGLKKEEVKVEVDDGNILQISGERSREQEEKSDKWHRVERSSGKFLRRF 118
TPE HVFKADVPGLKKEEVKVEV+DGN+LQISGERS+EQEEK+DKWHRVERSSGKFLRRF
Sbjct: 61 TPEAHVFKADVPGLKKEEVKVEVEDGNVLQISGERSKEQEEKTDKWHRVERSSGKFLRRF 120
Query: 119 RLPENTKPEQIKASMENGVLXXXXXXXXXXXXDVKSIQISG 159
RLPENTKPEQIKASMENGVL DVKSIQ++G
Sbjct: 121 RLPENTKPEQIKASMENGVLTVTVPKEEPKKPDVKSIQVTG 161
>Os01g0136200 16.9 kDa class I heat shock protein
Length = 150
Score = 174 bits (441), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 97/159 (61%), Positives = 119/159 (74%), Gaps = 9/159 (5%)
Query: 1 MSLIRRGNAFDPFSLDLWDPVDGFPFXXXXXXXXXXXLFPRANSDAAAFAGARIDWKETP 60
MSL+RR N FDPFSLDLWDP D + +++D AAFA ARIDWKETP
Sbjct: 1 MSLVRRSNVFDPFSLDLWDPFDSV---------FRSVVPATSDNDTAAFANARIDWKETP 51
Query: 61 EVHVFKADVPGLKKEEVKVEVDDGNILQISGERSREQEEKSDKWHRVERSSGKFLRRFRL 120
E HVFKAD+PG+KKEEVKVEV++GN+L ISG+RS+E+E+K+DKWHRVERSSG+F+RRFRL
Sbjct: 52 ESHVFKADLPGVKKEEVKVEVEEGNVLVISGQRSKEKEDKNDKWHRVERSSGQFMRRFRL 111
Query: 121 PENTKPEQIKASMENGVLXXXXXXXXXXXXDVKSIQISG 159
PEN K +Q+KA MENGVL +VK+I+ISG
Sbjct: 112 PENAKVDQVKAGMENGVLTVTVPKAEVKKPEVKAIEISG 150
>Os01g0136100 16.9 kDa class I heat shock protein
Length = 150
Score = 172 bits (437), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 96/159 (60%), Positives = 119/159 (74%), Gaps = 9/159 (5%)
Query: 1 MSLIRRGNAFDPFSLDLWDPVDGFPFXXXXXXXXXXXLFPRANSDAAAFAGARIDWKETP 60
MSL+RR N FDPFSLDLWDP D + +++D AAFA ARIDWKETP
Sbjct: 1 MSLVRRSNVFDPFSLDLWDPFDSV---------FRSVVPATSDNDTAAFANARIDWKETP 51
Query: 61 EVHVFKADVPGLKKEEVKVEVDDGNILQISGERSREQEEKSDKWHRVERSSGKFLRRFRL 120
E HVFKAD+PG+KKEEVKVEV++GN+L ISG+RS+E+E+K+DKWHRVERSSG+F+RRFRL
Sbjct: 52 ESHVFKADLPGVKKEEVKVEVEEGNVLVISGQRSKEKEDKNDKWHRVERSSGQFMRRFRL 111
Query: 121 PENTKPEQIKASMENGVLXXXXXXXXXXXXDVKSIQISG 159
PEN K +Q+KA +ENGVL +VK+I+ISG
Sbjct: 112 PENAKVDQVKAGLENGVLTVTVPKAEVKKPEVKAIEISG 150
>Os01g0136000 Similar to Cytosolic class I small heat-shock protein HSP17.5
Length = 149
Score = 169 bits (427), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 97/160 (60%), Positives = 119/160 (74%), Gaps = 12/160 (7%)
Query: 1 MSLIRRGNAFDPFSLDLWDPVDGFPFXXXXXXXXXXXLFP-RANSDAAAFAGARIDWKET 59
MSL+RR N FDPF+ D WDP DG L P ++ D AAFA AR+DWKET
Sbjct: 1 MSLVRRSNVFDPFA-DFWDPFDGV----------FRSLVPATSDRDTAAFANARVDWKET 49
Query: 60 PEVHVFKADVPGLKKEEVKVEVDDGNILQISGERSREQEEKSDKWHRVERSSGKFLRRFR 119
PE HVFKAD+PG+KKEEVKVEV++GN+L ISG+RS+E+E+K+DKWHRVERSSG+F+RRFR
Sbjct: 50 PESHVFKADLPGVKKEEVKVEVEEGNVLVISGQRSKEKEDKNDKWHRVERSSGQFMRRFR 109
Query: 120 LPENTKPEQIKASMENGVLXXXXXXXXXXXXDVKSIQISG 159
LPEN K +Q+KASMENGVL +VK+I+ISG
Sbjct: 110 LPENAKVDQVKASMENGVLTVTVPKAEVKKPEVKAIEISG 149
>Os01g0135800 Similar to Cytosolic class I small heat shock protein 3B (Fragment)
Length = 150
Score = 139 bits (349), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 72/162 (44%), Positives = 94/162 (58%), Gaps = 15/162 (9%)
Query: 1 MSLIRRGNAFDPFSLDLWDPVDGFPFXXXXXXXXXXXLFPRANSDAAAFAGARIDWKETP 60
MSL+R GN DP S+D W D PF R+DWKETP
Sbjct: 1 MSLVRSGNVLDPMSVDFW--ADADPFGAVRSLAER----------CPVLTNVRVDWKETP 48
Query: 61 EVHVFKADVPGLKKEEVKVEVDDGNILQISGERSREQE---EKSDKWHRVERSSGKFLRR 117
HVF AD+PG++K++ KVEV+DG +L ISGER+RE++ + ++WH VERSSGKF RR
Sbjct: 49 TAHVFTADLPGVRKDQAKVEVEDGGVLVISGERAREEDVDGKNDERWHHVERSSGKFQRR 108
Query: 118 FRLPENTKPEQIKASMENGVLXXXXXXXXXXXXDVKSIQISG 159
FRLP + +Q+ ASM+NGVL +K+I ISG
Sbjct: 109 FRLPRGARVDQVSASMDNGVLTVTVPKEETKKPQLKAIPISG 150
>Os04g0445100 Similar to 22.7 kDa class IV heat shock protein precursor
Length = 215
Score = 101 bits (252), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 49/98 (50%), Positives = 68/98 (69%), Gaps = 4/98 (4%)
Query: 45 DAAAFAGARIDWKETPEVHVFKADVPGLKKEEVKVEVDDGNILQISGERSR----EQEEK 100
D A + AR+DW+ET + H DVPG++KE+++VEV+D +L+ISGER R EQ+
Sbjct: 69 DVAMLSMARVDWRETGDAHEVVVDVPGMRKEDLRVEVEDNRVLRISGERRREETTEQKGG 128
Query: 101 SDKWHRVERSSGKFLRRFRLPENTKPEQIKASMENGVL 138
D WHR ERS G+F R+ RLP+N + I AS++NGVL
Sbjct: 129 GDHWHREERSYGRFWRQLRLPDNADLDSIAASLDNGVL 166
>Os02g0128000 Similar to Cytosolic class I small heat shock protein 6 (Fragment)
Length = 177
Score = 90.5 bits (223), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 47/87 (54%), Positives = 68/87 (78%)
Query: 52 ARIDWKETPEVHVFKADVPGLKKEEVKVEVDDGNILQISGERSREQEEKSDKWHRVERSS 111
A +DWKET HVF AD+PG+++EEV+VEV++ +L+ISG+R+R EEK ++WHRVERSS
Sbjct: 70 ASMDWKETAAAHVFMADMPGVRREEVRVEVEEEKVLRISGQRARAAEEKGERWHRVERSS 129
Query: 112 GKFLRRFRLPENTKPEQIKASMENGVL 138
+F+R RLP N + + A+++NGVL
Sbjct: 130 ERFVRTVRLPPNANTDGVHAALDNGVL 156
>Os06g0253100 HSP20-like chaperone domain containing protein
Length = 146
Score = 86.7 bits (213), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 47/100 (47%), Positives = 64/100 (64%), Gaps = 8/100 (8%)
Query: 46 AAAFAGARIDWKETPEVHVFKADVPGLKKEEVKVEVDDGNILQISG-------ERSREQE 98
A+A A A +DW ETP HV + +VPGL K++VKV+V+DGN+L + G E+ RE+
Sbjct: 24 ASASATAAMDWVETPTSHVLRINVPGLGKDDVKVQVEDGNVLTVRGAAPHAAAEKERER- 82
Query: 99 EKSDKWHRVERSSGKFLRRFRLPENTKPEQIKASMENGVL 138
EK WH ER +F R LP + EQI+AS++NGVL
Sbjct: 83 EKDVVWHVAERGRPEFAREVALPAEVRVEQIRASVDNGVL 122
>Os11g0244200 Similar to Pisum sativum 17.9 kDa heat shock protein (hsp17.9)
(Fragment)
Length = 206
Score = 79.0 bits (193), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/95 (44%), Positives = 64/95 (67%), Gaps = 8/95 (8%)
Query: 52 ARIDWKETPEVHVFKADVPGLKKEEVKVEVDDGN-ILQISGERSREQEEKSD-------K 103
AR DWKETPE HV DVPG+++ +V+VEVD+ + +L++SGER R + + +
Sbjct: 72 ARCDWKETPEAHVVTVDVPGVRRGDVRVEVDEASRVLRVSGERRRAGAAEEEEGERDGVR 131
Query: 104 WHRVERSSGKFLRRFRLPENTKPEQIKASMENGVL 138
WHR ER++G+F RRFR+P ++ A +++GVL
Sbjct: 132 WHRAERAAGRFWRRFRMPPGADVGRVAARLDDGVL 166
>Os02g0217900 Similar to Cytosolic class II small heat shock protein 4 (Fragment)
Length = 175
Score = 70.1 bits (170), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 59/101 (58%), Gaps = 7/101 (6%)
Query: 45 DAAAFAGARIDWKE--TPEVHVFKADVPGLKKEEVKVEVDDGNILQISGERSREQEEKSD 102
D A A +D KE V D+PG+ +V+VEV+DGN+L ISGER R + D
Sbjct: 42 DRRAMANTPMDVKELRASGALVLAVDMPGVAPADVRVEVEDGNVLAISGERRRPAGDGDD 101
Query: 103 -----KWHRVERSSGKFLRRFRLPENTKPEQIKASMENGVL 138
K+ R+ER GKF+RRF LPE+ + ++A ++GVL
Sbjct: 102 GGEGVKYLRMERRMGKFMRRFPLPESADLDGVRAEYKDGVL 142
>Os01g0184200 Similar to 17.5 kDa class II heat shock protein
Length = 166
Score = 68.9 bits (167), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 60/98 (61%), Gaps = 4/98 (4%)
Query: 45 DAAAFAGARIDWKETPEVHVFKADVPGLKKEEVKVEVDDGNILQIS----GERSREQEEK 100
DA A A D K+ P + F D+PGLK ++KV+V++ +L IS E++E+
Sbjct: 46 DARAMAATPADVKDLPGAYAFVVDMPGLKSSDIKVQVEEERLLVISGERRRGGGEEEKEE 105
Query: 101 SDKWHRVERSSGKFLRRFRLPENTKPEQIKASMENGVL 138
S K+ R+ER GKF+R+F LP+N ++I A ++GVL
Sbjct: 106 SCKYLRMERRMGKFMRKFVLPDNADVDKISAVCQDGVL 143
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.316 0.135 0.400
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 4,815,729
Number of extensions: 185639
Number of successful extensions: 587
Number of sequences better than 1.0e-10: 17
Number of HSP's gapped: 571
Number of HSP's successfully gapped: 17
Length of query: 159
Length of database: 17,035,801
Length adjustment: 93
Effective length of query: 66
Effective length of database: 12,179,899
Effective search space: 803873334
Effective search space used: 803873334
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 152 (63.2 bits)