Os01g0136100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : 16.9 kDa class I heat shock protein.
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Os01g0136100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : 16.9 kDa class I heat shock protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 492.92 | 1.04 | 5.9 | -1.64 | 1.66 | 5.97 | -1.27 | -4.85 | 0.313 | 1.3 | 11.41 | 882 | 0.317 | -- |
| 503.07 | 1.04 | 5.8 | -0.985 | 1.56 | 5.93 | 0.514 | -- | 0.476 | 2.43 | 12.05 | 897 | 9.29e-06 | -- |
| 495.98 | 1.04 | 5.86 | -1.36 | 1.83 | 6.2 | -- | -2.91 | 0.369 | 1.63 | 11.01 | 886 | 0.208 | -- |
| 504.09 | 1.05 | 5.8 | -0.992 | 1.59 | 5.93 | -- | -- | 0.488 | 2.37 | 11.86 | 896 | 3.57e-07 | -- |
| 528.72 | 1.07 | 5.72 | -1.21 | -- | 5.36 | -- | -0.0621 | 0.537 | -- | 14.5 | 1069 | 1.52 | -- |
| 797.03 | 1.32 | 5.61 | 0.213 | 1.26 | -- | 0.369 | -- | 1.32 | 14.8 | -- | -- | -- | -- |
| 797.5 | 1.32 | 5.61 | 0.222 | 1.26 | -- | -- | -- | 1.32 | 14.8 | -- | -- | -- | -- |
| 510.17 | 1.05 | 5.8 | -0.945 | -- | 4.49 | -- | -- | 0.487 | -- | 15.3 | 999 | 0.933 | -- |
| 526.84 | 1.07 | 5.77 | -- | 1.74 | 5.77 | -- | -- | 0.666 | 1.87 | 10.33 | 881 | 0.0165 | -- |
| 889.75 | 1.39 | 5.62 | 0.169 | -- | -- | -- | -- | 1.29 | -- | -- | -- | -- | -- |
| 798.8 | 1.32 | 5.62 | -- | 1.26 | -- | -- | -- | 1.3 | 14.8 | -- | -- | -- | -- |
| 531.1 | 1.07 | 5.76 | -- | -- | 4.16 | -- | -- | 0.675 | -- | 15.44 | 971 | 0.752 | -- |
| 890.5 | 1.39 | 5.62 | -- | -- | -- | -- | -- | 1.27 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 495.89 | temperature | 15 | 720 | > th | dose dependent | rect. | 24 | 16 |
| 5 | 499.08 | temperature | 30 | 720 | < th | dose dependent | rect. | 24 | 17 |
| 19 | 501.00 | temperature | 15 | 720 | > th | dose dependent | sin | 5 | NA |
| 33 | 503.14 | temperature | 30 | 720 | < th | dose dependent | sin | 4 | NA |
| 205 | 525.69 | temperature | 15 | 270 | > th | dose dependent | rect. | 3 | 22 |
| 319 | 532.12 | temperature | 30 | 1440 | < th | dose dependent | rect. | 5 | 17 |
| 449 | 533.77 | temperature | 30 | 1440 | < th | dose dependent | no | NA | NA |
| 452 | 533.80 | temperature | 30 | 1440 | < th | dose dependent | rect. | 10 | 23 |
| 546 | 535.62 | temperature | 30 | 1440 | < th | dose dependent | rect. | 13 | 13 |
| 608 | 536.86 | temperature | 30 | 270 | < th | dose dependent | rect. | 7 | 23 |
| 663 | 537.87 | temperature | 15 | 720 | > th | dose dependent | rect. | 14 | 23 |
| 696 | 538.23 | temperature | 15 | 720 | > th | dose dependent | no | NA | NA |
| 771 | 538.91 | temperature | 15 | 1440 | > th | dose dependent | rect. | 5 | 23 |
| 833 | 539.31 | temperature | 15 | 1440 | > th | dose dependent | rect. | 8 | 23 |
| 840 | 539.37 | temperature | 15 | 1440 | > th | dose dependent | rect. | 10 | 23 |