BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0136100 Os01g0136100|X60820
(150 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G59720.1 | chr5:24062632-24063117 FORWARD LENGTH=162 175 9e-45
AT3G46230.1 | chr3:16984263-16984733 REVERSE LENGTH=157 169 7e-43
AT1G53540.1 | chr1:19980510-19980983 FORWARD LENGTH=158 164 1e-41
AT2G29500.1 | chr2:12633279-12633740 REVERSE LENGTH=154 164 2e-41
AT1G07400.1 | chr1:2275148-2275621 FORWARD LENGTH=158 152 5e-38
AT1G59860.1 | chr1:22031474-22031941 FORWARD LENGTH=156 139 7e-34
AT4G10250.1 | chr4:6370537-6371124 FORWARD LENGTH=196 103 3e-23
AT5G37670.1 | chr5:14969035-14969448 FORWARD LENGTH=138 82 9e-17
AT5G12020.1 | chr5:3882409-3882876 REVERSE LENGTH=156 75 9e-15
AT5G12030.1 | chr5:3884214-3884684 REVERSE LENGTH=157 74 4e-14
AT4G27670.1 | chr4:13819048-13819895 REVERSE LENGTH=228 55 1e-08
AT1G54050.1 | chr1:20179558-20180122 REVERSE LENGTH=156 50 6e-07
>AT5G59720.1 | chr5:24062632-24063117 FORWARD LENGTH=162
Length = 161
Score = 175 bits (443), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 91/159 (57%), Positives = 108/159 (67%), Gaps = 9/159 (5%)
Query: 1 MSLV------RRSNVFDPFSLDLWDPFDSVFR---SVVPATSDNDTAAFANARIDWKETP 51
MSL+ RRSNVFDPFS DLWDPF+ F ++ A++ D AAF NAR+DWKETP
Sbjct: 1 MSLIPSIFGGRRSNVFDPFSQDLWDPFEGFFTPSSALANASTARDVAAFTNARVDWKETP 60
Query: 52 ESHVFKADLPGXXXXXXXXXXXXGNVLVISGQRSKEKEDKNDKWHRVERSSGQFMRRFRL 111
E+HVFKADLPG NVL ISG+RSKE E+KNDKWHRVER+SG+FMRRFRL
Sbjct: 61 EAHVFKADLPGLKKEEVKVEVEDKNVLQISGERSKENEEKNDKWHRVERASGKFMRRFRL 120
Query: 112 PENAKVDQVKAGLENGVLXXXXXXXXXXXXXXXXIEISG 150
PENAK+++VKA +ENGVL I+ISG
Sbjct: 121 PENAKMEEVKATMENGVLTVVVPKAPEKKPQVKSIDISG 159
>AT3G46230.1 | chr3:16984263-16984733 REVERSE LENGTH=157
Length = 156
Score = 169 bits (427), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 84/156 (53%), Positives = 103/156 (66%), Gaps = 6/156 (3%)
Query: 1 MSLV------RRSNVFDPFSLDLWDPFDSVFRSVVPATSDNDTAAFANARIDWKETPESH 54
MSLV RR+NVFDPFSLD+WDPF+ + D AAF NA++DW+ETPE+H
Sbjct: 1 MSLVPSFFGGRRTNVFDPFSLDVWDPFEGFLTPGLTNAPAKDVAAFTNAKVDWRETPEAH 60
Query: 55 VFKADLPGXXXXXXXXXXXXGNVLVISGQRSKEKEDKNDKWHRVERSSGQFMRRFRLPEN 114
VFKAD+PG GN+L ISG+RS E E+K+D WHRVERSSG+FMRRFRLPEN
Sbjct: 61 VFKADVPGLKKEEVKVEVEDGNILQISGERSSENEEKSDTWHRVERSSGKFMRRFRLPEN 120
Query: 115 AKVDQVKAGLENGVLXXXXXXXXXXXXXXXXIEISG 150
AKV++VKA +ENGVL ++ISG
Sbjct: 121 AKVEEVKASMENGVLSVTVPKVQESKPEVKSVDISG 156
>AT1G53540.1 | chr1:19980510-19980983 FORWARD LENGTH=158
Length = 157
Score = 164 bits (416), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 84/157 (53%), Positives = 104/157 (66%), Gaps = 7/157 (4%)
Query: 1 MSLV------RRSNVFDPFSLDLWDPFDSVFR-SVVPATSDNDTAAFANARIDWKETPES 53
MSL+ RR+NVFDPFSLD++DPF+ S + D AAF NA++DW+ETPE+
Sbjct: 1 MSLIPSIFGGRRTNVFDPFSLDVFDPFEGFLTPSGLANAPAMDVAAFTNAKVDWRETPEA 60
Query: 54 HVFKADLPGXXXXXXXXXXXXGNVLVISGQRSKEKEDKNDKWHRVERSSGQFMRRFRLPE 113
HVFKADLPG GN+L ISG+RS E E+KNDKWHRVERSSG+F RRFRLPE
Sbjct: 61 HVFKADLPGLRKEEVKVEVEDGNILQISGERSNENEEKNDKWHRVERSSGKFTRRFRLPE 120
Query: 114 NAKVDQVKAGLENGVLXXXXXXXXXXXXXXXXIEISG 150
NAK++++KA +ENGVL I+ISG
Sbjct: 121 NAKMEEIKASMENGVLSVTVPKVPEKKPEVKSIDISG 157
>AT2G29500.1 | chr2:12633279-12633740 REVERSE LENGTH=154
Length = 153
Score = 164 bits (415), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 81/146 (55%), Positives = 97/146 (66%), Gaps = 4/146 (2%)
Query: 5 RRSNVFDPFSLDLWDPFDSVFRSVVPATSDNDTAAFANARIDWKETPESHVFKADLPGXX 64
RRSN+FDPFSLD+WDPF + + ++ + +A NAR+DW+ETPE+HVFKADLPG
Sbjct: 12 RRSNIFDPFSLDVWDPF----KELTSSSLSRENSAIVNARVDWRETPEAHVFKADLPGLK 67
Query: 65 XXXXXXXXXXGNVLVISGQRSKEKEDKNDKWHRVERSSGQFMRRFRLPENAKVDQVKAGL 124
+VL ISG+R EKEDKND WHRVERSSGQF RRFRLPEN K+DQVKA +
Sbjct: 68 KEEVKVEIEEDSVLKISGERHVEKEDKNDTWHRVERSSGQFTRRFRLPENVKMDQVKAAM 127
Query: 125 ENGVLXXXXXXXXXXXXXXXXIEISG 150
ENGVL I+ISG
Sbjct: 128 ENGVLTVTVPKAETKKADVKSIQISG 153
>AT1G07400.1 | chr1:2275148-2275621 FORWARD LENGTH=158
Length = 157
Score = 152 bits (385), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 75/126 (59%), Positives = 91/126 (72%), Gaps = 4/126 (3%)
Query: 5 RRSN-VFDPFSLDLWDPFDSVFRSVVPATSDNDTAAFANARIDWKETPESHVFKADLPGX 63
RRSN +FDPFSLD+WDPF + P++ +T+A NAR+DWKET E+HVFKADLPG
Sbjct: 12 RRSNSIFDPFSLDVWDPFKEL---QFPSSLSGETSAITNARVDWKETAEAHVFKADLPGM 68
Query: 64 XXXXXXXXXXXGNVLVISGQRSKEKEDKNDKWHRVERSSGQFMRRFRLPENAKVDQVKAG 123
+VL ISG+R EKE+K D WHRVERSSGQF R+F+LPEN K+DQVKA
Sbjct: 69 KKEEVKVEIEDDSVLKISGERHVEKEEKQDTWHRVERSSGQFSRKFKLPENVKMDQVKAS 128
Query: 124 LENGVL 129
+ENGVL
Sbjct: 129 MENGVL 134
>AT1G59860.1 | chr1:22031474-22031941 FORWARD LENGTH=156
Length = 155
Score = 139 bits (349), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 70/120 (58%), Positives = 83/120 (69%), Gaps = 6/120 (5%)
Query: 10 FDPFSLDLWDPFDSVFRSVVPATSDNDTAAFANARIDWKETPESHVFKADLPGXXXXXXX 69
FDPFSLD+WDPF + + ++A ANAR+DWKET E+HVFKADLPG
Sbjct: 19 FDPFSLDVWDPFKEL------QFPSSSSSAIANARVDWKETAEAHVFKADLPGMKKEEVK 72
Query: 70 XXXXXGNVLVISGQRSKEKEDKNDKWHRVERSSGQFMRRFRLPENAKVDQVKAGLENGVL 129
+VL ISG+R EKE+K D WHRVERSSG F R+FRLPEN K+DQVKA +ENGVL
Sbjct: 73 VEIEDDSVLKISGERHVEKEEKQDTWHRVERSSGGFSRKFRLPENVKMDQVKASMENGVL 132
>AT4G10250.1 | chr4:6370537-6371124 FORWARD LENGTH=196
Length = 195
Score = 103 bits (257), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 58/126 (46%), Positives = 76/126 (60%), Gaps = 10/126 (7%)
Query: 12 PFSL--DLW-----DPFDSVFRSVVPATSDNDTA-AFANARIDWKETPESHVFKADLPGX 63
P SL DLW DPF + R +P + DT+ A + AR+DWKET E H D+PG
Sbjct: 34 PGSLLSDLWLDRFPDPFKILER--IPLGLERDTSVALSPARVDWKETAEGHEIMLDIPGL 91
Query: 64 XXXXXXXXXXXGNVLVISGQRSKEKEDKNDKWHRVERSSGQFMRRFRLPENAKVDQVKAG 123
VL +SG+R +E+E K D+WHRVERS G+F R+F+LP+N ++ VKA
Sbjct: 92 KKDEVKIEVEENGVLRVSGERKREEEKKGDQWHRVERSYGKFWRQFKLPDNVDMESVKAK 151
Query: 124 LENGVL 129
LENGVL
Sbjct: 152 LENGVL 157
>AT5G37670.1 | chr5:14969035-14969448 FORWARD LENGTH=138
Length = 137
Score = 82.0 bits (201), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 43/94 (45%), Positives = 56/94 (59%), Gaps = 5/94 (5%)
Query: 41 ANARIDWKETPESHVFKADLPGXXXXXXXXXXXXGNVLVISGQRSKEKEDKNDKWHRVER 100
+ A IDW E+ SH+FK ++PG GNVL I G+ KE++ +N WH ER
Sbjct: 20 STALIDWMESNNSHIFKINVPGYNKEDIKVQIEEGNVLSIRGEGIKEEKKENLVWHVAER 79
Query: 101 SS-----GQFMRRFRLPENAKVDQVKAGLENGVL 129
+ +F+RR LPEN KVDQVKA +ENGVL
Sbjct: 80 EAFSGGGSEFLRRIELPENVKVDQVKAYVENGVL 113
>AT5G12020.1 | chr5:3882409-3882876 REVERSE LENGTH=156
Length = 155
Score = 75.5 bits (184), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 56/95 (58%), Gaps = 1/95 (1%)
Query: 36 DTAAFANARIDWKETPESHVFKADLPGXXXXXXXXXXXXGNVLVISGQRSKE-KEDKNDK 94
D A A D E P ++ F D+PG NVLV+SG+R +E KE++ K
Sbjct: 38 DAKAMAATPADVIEHPNAYAFVVDMPGIKGDEIKVQVENDNVLVVSGERQRENKENEGVK 97
Query: 95 WHRVERSSGQFMRRFRLPENAKVDQVKAGLENGVL 129
+ R+ER G+FMR+F+LPENA +D++ A +GVL
Sbjct: 98 YVRMERRMGKFMRKFQLPENADLDKISAVCHDGVL 132
>AT5G12030.1 | chr5:3884214-3884684 REVERSE LENGTH=157
Length = 156
Score = 73.6 bits (179), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 58/95 (61%), Gaps = 1/95 (1%)
Query: 36 DTAAFANARIDWKETPESHVFKADLPGXXXXXXXXXXXXGNVLVISGQRSKE-KEDKNDK 94
D A A D E P+++VF D+PG NVLV+SG+R ++ KE++ K
Sbjct: 39 DAKAMAATPADVIEHPDAYVFAVDMPGIKGDEIQVQIENENVLVVSGKRQRDNKENEGVK 98
Query: 95 WHRVERSSGQFMRRFRLPENAKVDQVKAGLENGVL 129
+ R+ER G+FMR+F+LP+NA ++++ A +GVL
Sbjct: 99 FVRMERRMGKFMRKFQLPDNADLEKISAACNDGVL 133
>AT4G27670.1 | chr4:13819048-13819895 REVERSE LENGTH=228
Length = 227
Score = 55.5 bits (132), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 60/129 (46%), Gaps = 13/129 (10%)
Query: 9 VFDPFS-----LDLWDPFDSVFRSVVPATSDN-DTAAFANARIDWKETPESHVFKA--DL 60
+ DP S + D D +F +P + N + + R W E H K D+
Sbjct: 85 LLDPLSPMRTMRQMLDTMDRMFEDTMPVSGRNRGGSGVSEIRAPWDIKEEEHEIKMRFDM 144
Query: 61 PGXXXXXXXXXXXXGNVLVISGQRSKEKEDKNDKWHRVERSSGQFMRRFRLPENAKVDQV 120
PG NVLVI G+ ++KED +D W RS + R +LP+N + D++
Sbjct: 145 PGLSKEDVKISVE-DNVLVIKGE--QKKEDSDDSWS--GRSVSSYGTRLQLPDNCEKDKI 199
Query: 121 KAGLENGVL 129
KA L+NGVL
Sbjct: 200 KAELKNGVL 208
>AT1G54050.1 | chr1:20179558-20180122 REVERSE LENGTH=156
Length = 155
Score = 49.7 bits (117), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 47/93 (50%), Gaps = 5/93 (5%)
Query: 42 NARIDWKETPESHVFKADLPGXXXXXXXXXXXXGNVLVISGQRSKEKED----KNDKWHR 97
N ID E+P+ ++F D+PG LVI ++++D + K+ R
Sbjct: 41 NIPIDILESPKEYIFYLDIPGISKSDIQVTVEEERTLVIKSNGKRKRDDDESEEGSKYIR 100
Query: 98 VERSSGQ-FMRRFRLPENAKVDQVKAGLENGVL 129
+ER Q +++FRLPE+A + V A + GVL
Sbjct: 101 LERRLAQNLVKKFRLPEDADMASVTAKYQEGVL 133
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.317 0.133 0.396
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 2,685,316
Number of extensions: 93949
Number of successful extensions: 263
Number of sequences better than 1.0e-05: 12
Number of HSP's gapped: 258
Number of HSP's successfully gapped: 12
Length of query: 150
Length of database: 11,106,569
Length adjustment: 90
Effective length of query: 60
Effective length of database: 8,639,129
Effective search space: 518347740
Effective search space used: 518347740
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 107 (45.8 bits)