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Os03g0266900

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Low molecular mass heat shock protein Oshsp17.3.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 8.99 (0.0507) R2 : 0.736
β1 : -1.29 (0.187) R2dD : 0.0294 R2D : 0.0138
β2 : 3.11 (0.126) R2dC : 0.362 R2C : 0.254
β3 : -3.86 (0.159) R2dE : 0.354 R2E : 0.276
β4 : 4.38 (0.505) R2dD*C : 0.044 R2D*C : 0.0207
β5 : -4.34 (0.72) R2dD*E : 0.0217 R2D*E : 0.0288
γ1 : -0.823 (0.108) R2dN8 : 0.0453 R2N8 : 0.00595
σ : 0.953
deviance : 411.16
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_____
C
peak time of C : 9.18
E
wheather : radiation
threshold : 7.628
memory length : 62
response mode : < th
dose dependency : dose dependent
G
type of G : sin
peak or start time of G : 22
open length of G : --

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = sin)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
411.16 0.953 8.99 -1.29 3.11 -3.86 4.38 -4.34 -0.823 9.18 7.628 62 22 --
437.72 0.974 8.97 -1.12 3.07 -3.66 4.71 -- -0.771 9.98 7.222 51 21.2 --
475.95 1.02 8.99 -1.05 3 -3.73 -- -4.19 -0.821 8.73 7.808 62 22.8 --
511.46 1.05 8.95 -0.992 3.06 -3.97 -- -- -0.804 9.06 7.396 64 22.1 --
607.84 1.15 9.02 -1.21 -- -3.31 -- -4.51 -0.636 -- 17.32 16 4.99 --
655.06 1.2 8.95 -1.32 3.45 -- 4.74 -- -0.608 12.1 -- -- -- --
752.3 1.28 8.94 -1.14 3.43 -- -- -- -0.586 12.1 -- -- -- --
703.27 1.24 9.01 -1.12 -- -3.27 -- -- -0.636 -- 13.07 16 4.67 --
538.78 1.08 8.94 -- 3.09 -4.05 -- -- -0.7 8.99 7.732 63 22.2 --
1494.17 1.81 9.01 -1.24 -- -- -- -- -0.636 -- -- -- -- --
786.27 1.31 8.91 -- 3.45 -- -- -- -0.46 12.1 -- -- -- --
736.27 1.26 9 -- -- -3.25 -- -- -0.576 -- 12.63 16 4.63 --
1535.03 1.83 8.98 -- -- -- -- -- -0.498 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 428.61 radiation 10.0 30 < th dose dependent sin 4 NA
8 439.14 radiation 10.0 90 < th dose dependent rect. 1 14
12 444.00 radiation 1.0 90 < th dose independent sin 4 NA
14 444.80 radiation 1.0 90 > th dose independent sin 3 NA
20 449.20 temperature 10.0 10 > th dose dependent rect. 6 18
31 452.08 temperature 20.0 90 > th dose dependent rect. 5 6
33 453.43 humidity 80.0 10 > th dose dependent rect. 24 18
34 453.52 humidity 80.0 10 > th dose dependent rect. 24 16
36 453.83 temperature 25.0 30 > th dose independent rect. 6 5
38 454.25 humidity 80.0 10 > th dose dependent rect. 2 16
39 454.29 temperature 10.0 10 > th dose dependent rect. 6 20
41 454.51 humidity 80.0 10 > th dose dependent rect. 2 14
94 463.96 radiation 1.0 90 < th dose independent rect. 1 16
114 466.58 temperature 20.0 10 > th dose dependent rect. 6 5
132 468.22 temperature 25.0 10 > th dose dependent sin 7 NA
191 473.83 humidity 80.0 10 > th dose dependent sin 3 NA
195 474.02 temperature 30.0 10 < th dose dependent rect. 2 15
226 477.01 temperature 15.0 10 > th dose dependent rect. 6 8
253 479.21 radiation 20.0 10 < th dose dependent rect. 2 4
261 479.60 radiation 20.0 10 < th dose dependent rect. 13 17
277 480.59 temperature 25.0 30 < th dose independent rect. 2 14
331 483.40 temperature 20.0 270 > th dose dependent rect. 6 2
339 483.94 wind 9.0 10 < th dose independent rect. 6 20
341 484.01 precipitation 0.1 270 < th dose independent rect. 3 22
342 484.01 precipitation 0.1 270 < th dose dependent rect. 3 22
357 484.53 radiation 10.0 10 < th dose independent rect. 2 4
363 484.65 temperature 25.0 270 > th dose independent rect. 5 3
372 485.02 wind 9.0 10 < th dose independent rect. 2 4
373 485.02 temperature 10.0 10 > th dose independent rect. 2 4
375 485.02 temperature 30.0 10 < th dose independent rect. 2 4
376 485.02 humidity 50.0 10 > th dose independent rect. 2 4
379 485.02 atmosphere 995.0 10 > th dose independent rect. 2 4
380 485.02 atmosphere 1010.0 10 < th dose independent rect. 2 4
385 485.02 temperature 10.0 10 > th dose independent rect. 6 20
435 486.58 temperature 10.0 270 > th dose dependent rect. 1 2
438 486.80 precipitation 0.1 10 < th dose independent rect. 6 20
439 486.80 precipitation 0.1 10 < th dose dependent rect. 6 20
451 487.42 wind 9.0 270 < th dose dependent rect. 1 2
456 487.53 temperature 10.0 270 > th dose independent rect. 1 2
458 487.53 temperature 30.0 270 < th dose independent rect. 1 2
459 487.53 humidity 50.0 270 > th dose independent rect. 1 2
462 487.53 atmosphere 995.0 270 > th dose independent rect. 1 2
463 487.53 atmosphere 1010.0 270 < th dose independent rect. 1 2
465 487.53 radiation 1.0 270 < th dose independent rect. 1 2
470 487.53 temperature 10.0 270 > th dose independent rect. 3 22
471 487.53 radiation 1.0 270 < th dose dependent rect. 1 2
476 487.56 wind 9.0 270 < th dose independent rect. 1 2
478 487.66 humidity 50.0 10 > th dose dependent rect. 2 4
486 487.84 precipitation 0.1 270 < th dose independent rect. 1 2
488 487.84 precipitation 0.1 270 < th dose dependent rect. 1 2
508 488.02 wind 9.0 10 < th dose dependent rect. 2 4
519 488.44 humidity 50.0 270 > th dose dependent rect. 1 2
522 488.48 temperature 10.0 10 > th dose dependent rect. 2 4
525 488.53 humidity 50.0 10 > th dose dependent rect. 11 19
527 488.63 humidity 90.0 10 < th dose independent rect. 6 8
553 489.50 radiation 1.0 270 < th dose dependent rect. 22 21
564 489.75 wind 9.0 1440 < th dose independent rect. 3 4
565 489.75 temperature 10.0 1440 > th dose independent rect. 3 4
568 489.75 temperature 30.0 1440 < th dose independent rect. 3 4
572 489.75 humidity 50.0 1440 > th dose independent rect. 3 4
577 489.75 atmosphere 995.0 1440 > th dose independent rect. 3 4
578 489.75 radiation 40.0 1440 < th dose independent rect. 3 4
582 489.75 temperature 10.0 1440 > th dose independent rect. 7 20
586 489.79 radiation 1.0 90 > th dose independent rect. 5 6
603 490.08 humidity 90.0 30 < th dose independent sin 3 NA
646 491.22 precipitation 0.1 30 < th dose independent rect. 2 4
647 491.22 precipitation 0.1 30 < th dose dependent rect. 2 4
668 491.88 radiation 20.0 30 < th dose dependent rect. 7 23
671 492.11 humidity 90.0 90 < th dose independent rect. 6 5
674 492.16 wind 9.0 30 < th dose dependent rect. 24 6
680 492.37 humidity 50.0 30 > th dose dependent rect. 24 6
688 492.61 atmosphere 1015.0 1440 < th dose independent rect. 3 4
695 492.71 wind 9.0 30 < th dose dependent rect. 6 20
739 494.00 wind 7.0 90 < th dose dependent rect. 6 5
741 494.06 atmosphere 995.0 10 > th dose dependent rect. 2 4
747 494.15 temperature 15.0 270 > th dose independent rect. 4 20
748 494.16 wind 9.0 270 < th dose independent rect. 3 22
762 494.78 temperature 15.0 10 > th dose dependent rect. 6 10
801 495.75 radiation 1.0 270 > th dose independent sin 9 NA
813 496.04 temperature 10.0 30 > th dose dependent rect. 24 6
825 496.30 atmosphere 1010.0 270 < th dose independent rect. 24 4
827 496.31 temperature 15.0 270 > th dose independent rect. 24 4
829 496.32 temperature 30.0 270 < th dose independent rect. 24 4
830 496.32 humidity 50.0 270 > th dose independent rect. 24 4
833 496.32 atmosphere 995.0 270 > th dose independent rect. 24 4
845 496.33 wind 9.0 270 < th dose independent rect. 24 4
847 496.40 humidity 80.0 30 > th dose independent rect. 24 6
897 497.60 wind 9.0 30 < th dose independent rect. 6 18
934 498.03 radiation 1.0 270 < th dose independent sin 9 NA
941 498.14 temperature 25.0 10 > th dose dependent rect. 23 12
959 498.52 temperature 10.0 1440 > th dose independent rect. 1 6
962 498.52 temperature 30.0 1440 < th dose independent rect. 1 6
966 498.52 humidity 50.0 1440 > th dose independent rect. 1 6
971 498.52 atmosphere 995.0 1440 > th dose independent rect. 1 6
972 498.52 radiation 40.0 1440 < th dose independent rect. 1 6
976 498.52 temperature 10.0 1440 > th dose independent rect. 7 18