BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0266900 Os03g0266900|AK119243
(154 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os03g0266900 Low molecular mass heat shock protein Oshsp17.3 220 3e-58
Os03g0267200 Low molecular mass heat shock protein Oshsp17.7 202 8e-53
Os03g0267000 Low molecular mass heat shock protein Oshsp18.0 200 4e-52
Os03g0266300 Class I low-molecular-weight heat shock protei... 197 2e-51
Os01g0136200 16.9 kDa class I heat shock protein 169 6e-43
Os01g0136100 16.9 kDa class I heat shock protein 168 1e-42
Os01g0136000 Similar to Cytosolic class I small heat-shock ... 160 4e-40
Os01g0135800 Similar to Cytosolic class I small heat shock ... 120 4e-28
Os02g0128000 Similar to Cytosolic class I small heat shock ... 89 1e-18
Os04g0445100 Similar to 22.7 kDa class IV heat shock protei... 86 1e-17
Os06g0253100 HSP20-like chaperone domain containing protein 72 1e-13
Os11g0244200 Similar to Pisum sativum 17.9 kDa heat shock p... 66 8e-12
>Os03g0266900 Low molecular mass heat shock protein Oshsp17.3
Length = 154
Score = 220 bits (560), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 115/154 (74%), Positives = 115/154 (74%)
Query: 1 MSMIRRSNVFDPFSLDLWXXXXXXXXXXXXXXXXXRANSDAAAFAGARIDWKETPEAHVF 60
MSMIRRSNVFDPFSLDLW RANSDAAAFAGARIDWKETPEAHVF
Sbjct: 1 MSMIRRSNVFDPFSLDLWDPFDGFPFGSGSGSLFPRANSDAAAFAGARIDWKETPEAHVF 60
Query: 61 KADVPGLXXXXXXXXXXDGNVLQISGERIKEQEEKTDKWHRVERSSGKFLRRFRLPENTK 120
KADVPGL DGNVLQISGERIKEQEEKTDKWHRVERSSGKFLRRFRLPENTK
Sbjct: 61 KADVPGLKKEEVKVEVEDGNVLQISGERIKEQEEKTDKWHRVERSSGKFLRRFRLPENTK 120
Query: 121 PEQIKASMENGVLXXXXXXXXXXXXDVKSIQITG 154
PEQIKASMENGVL DVKSIQITG
Sbjct: 121 PEQIKASMENGVLTVTVPKEEPKKPDVKSIQITG 154
>Os03g0267200 Low molecular mass heat shock protein Oshsp17.7
Length = 159
Score = 202 bits (514), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 106/159 (66%), Positives = 111/159 (69%), Gaps = 5/159 (3%)
Query: 1 MSMIRRSNVFDPFSLDLWXXX-----XXXXXXXXXXXXXXRANSDAAAFAGARIDWKETP 55
MS+IRR N FDPFSLDLW RANSDAAAFAGARIDWKETP
Sbjct: 1 MSLIRRGNAFDPFSLDLWDPVDGFPFGSGGSSSSSGSLFPRANSDAAAFAGARIDWKETP 60
Query: 56 EAHVFKADVPGLXXXXXXXXXXDGNVLQISGERIKEQEEKTDKWHRVERSSGKFLRRFRL 115
E HVFKADVPGL DGN+LQISGER +EQEEK+DKWHRVERSSGKFLRRFRL
Sbjct: 61 EVHVFKADVPGLKKEEVKVEVDDGNILQISGERSREQEEKSDKWHRVERSSGKFLRRFRL 120
Query: 116 PENTKPEQIKASMENGVLXXXXXXXXXXXXDVKSIQITG 154
PENTKPEQIKASMENGVL DVKSIQI+G
Sbjct: 121 PENTKPEQIKASMENGVLTVTVPKEEPKKPDVKSIQISG 159
>Os03g0267000 Low molecular mass heat shock protein Oshsp18.0
Length = 161
Score = 200 bits (508), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 107/161 (66%), Positives = 111/161 (68%), Gaps = 7/161 (4%)
Query: 1 MSMIRRSNVFDPFSLDLWXX-------XXXXXXXXXXXXXXXRANSDAAAFAGARIDWKE 53
MS+IRRSNVFDPFSLDLW +S+ AAFAGARIDWKE
Sbjct: 1 MSLIRRSNVFDPFSLDLWDPFDGFPFGSGSRSSGSIFPSFPRGTSSETAAFAGARIDWKE 60
Query: 54 TPEAHVFKADVPGLXXXXXXXXXXDGNVLQISGERIKEQEEKTDKWHRVERSSGKFLRRF 113
TPEAHVFKADVPGL DGNVLQISGER KEQEEKTDKWHRVERSSGKFLRRF
Sbjct: 61 TPEAHVFKADVPGLKKEEVKVEVEDGNVLQISGERSKEQEEKTDKWHRVERSSGKFLRRF 120
Query: 114 RLPENTKPEQIKASMENGVLXXXXXXXXXXXXDVKSIQITG 154
RLPENTKPEQIKASMENGVL DVKSIQ+TG
Sbjct: 121 RLPENTKPEQIKASMENGVLTVTVPKEEPKKPDVKSIQVTG 161
>Os03g0266300 Class I low-molecular-weight heat shock protein 17.9
Length = 161
Score = 197 bits (502), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 104/161 (64%), Positives = 111/161 (68%), Gaps = 7/161 (4%)
Query: 1 MSMIRRSNVFDPFSLDLWXXXXXXXXXXXXXXXXXR-------ANSDAAAFAGARIDWKE 53
MS+IRRSNVFDPFSLDLW A+S+ AAFAGARIDWKE
Sbjct: 1 MSLIRRSNVFDPFSLDLWDPFDGFPFGSGGSSSGSIFPSFPRGASSETAAFAGARIDWKE 60
Query: 54 TPEAHVFKADVPGLXXXXXXXXXXDGNVLQISGERIKEQEEKTDKWHRVERSSGKFLRRF 113
TPEAHVFKADVPGL DGN+LQISGER KEQEEKTD+WHRVERSSGKFLRRF
Sbjct: 61 TPEAHVFKADVPGLKKEEVKVEVDDGNILQISGERNKEQEEKTDQWHRVERSSGKFLRRF 120
Query: 114 RLPENTKPEQIKASMENGVLXXXXXXXXXXXXDVKSIQITG 154
RLP+N KPEQIKASMENGVL DVKSIQI+G
Sbjct: 121 RLPDNAKPEQIKASMENGVLTVTVPKEEAKKPDVKSIQISG 161
>Os01g0136200 16.9 kDa class I heat shock protein
Length = 150
Score = 169 bits (429), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 86/154 (55%), Positives = 106/154 (68%), Gaps = 4/154 (2%)
Query: 1 MSMIRRSNVFDPFSLDLWXXXXXXXXXXXXXXXXXRANSDAAAFAGARIDWKETPEAHVF 60
MS++RRSNVFDPFSLDLW +++D AAFA ARIDWKETPE+HVF
Sbjct: 1 MSLVRRSNVFDPFSLDLWDPFDSVFRSVVPAT----SDNDTAAFANARIDWKETPESHVF 56
Query: 61 KADVPGLXXXXXXXXXXDGNVLQISGERIKEQEEKTDKWHRVERSSGKFLRRFRLPENTK 120
KAD+PG+ +GNVL ISG+R KE+E+K DKWHRVERSSG+F+RRFRLPEN K
Sbjct: 57 KADLPGVKKEEVKVEVEEGNVLVISGQRSKEKEDKNDKWHRVERSSGQFMRRFRLPENAK 116
Query: 121 PEQIKASMENGVLXXXXXXXXXXXXDVKSIQITG 154
+Q+KA MENGVL +VK+I+I+G
Sbjct: 117 VDQVKAGMENGVLTVTVPKAEVKKPEVKAIEISG 150
>Os01g0136100 16.9 kDa class I heat shock protein
Length = 150
Score = 168 bits (426), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 85/154 (55%), Positives = 106/154 (68%), Gaps = 4/154 (2%)
Query: 1 MSMIRRSNVFDPFSLDLWXXXXXXXXXXXXXXXXXRANSDAAAFAGARIDWKETPEAHVF 60
MS++RRSNVFDPFSLDLW +++D AAFA ARIDWKETPE+HVF
Sbjct: 1 MSLVRRSNVFDPFSLDLWDPFDSVFRSVVPAT----SDNDTAAFANARIDWKETPESHVF 56
Query: 61 KADVPGLXXXXXXXXXXDGNVLQISGERIKEQEEKTDKWHRVERSSGKFLRRFRLPENTK 120
KAD+PG+ +GNVL ISG+R KE+E+K DKWHRVERSSG+F+RRFRLPEN K
Sbjct: 57 KADLPGVKKEEVKVEVEEGNVLVISGQRSKEKEDKNDKWHRVERSSGQFMRRFRLPENAK 116
Query: 121 PEQIKASMENGVLXXXXXXXXXXXXDVKSIQITG 154
+Q+KA +ENGVL +VK+I+I+G
Sbjct: 117 VDQVKAGLENGVLTVTVPKAEVKKPEVKAIEISG 150
>Os01g0136000 Similar to Cytosolic class I small heat-shock protein HSP17.5
Length = 149
Score = 160 bits (405), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 83/154 (53%), Positives = 104/154 (67%), Gaps = 5/154 (3%)
Query: 1 MSMIRRSNVFDPFSLDLWXXXXXXXXXXXXXXXXXRANSDAAAFAGARIDWKETPEAHVF 60
MS++RRSNVFDPF+ D W ++ D AAFA AR+DWKETPE+HVF
Sbjct: 1 MSLVRRSNVFDPFA-DFWDPFDGVFRSLVPAT----SDRDTAAFANARVDWKETPESHVF 55
Query: 61 KADVPGLXXXXXXXXXXDGNVLQISGERIKEQEEKTDKWHRVERSSGKFLRRFRLPENTK 120
KAD+PG+ +GNVL ISG+R KE+E+K DKWHRVERSSG+F+RRFRLPEN K
Sbjct: 56 KADLPGVKKEEVKVEVEEGNVLVISGQRSKEKEDKNDKWHRVERSSGQFMRRFRLPENAK 115
Query: 121 PEQIKASMENGVLXXXXXXXXXXXXDVKSIQITG 154
+Q+KASMENGVL +VK+I+I+G
Sbjct: 116 VDQVKASMENGVLTVTVPKAEVKKPEVKAIEISG 149
>Os01g0135800 Similar to Cytosolic class I small heat shock protein 3B (Fragment)
Length = 150
Score = 120 bits (301), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 63/157 (40%), Positives = 82/157 (52%), Gaps = 10/157 (6%)
Query: 1 MSMIRRSNVFDPFSLDLWXXXXXXXXXXXXXXXXXRANSDAAAFAGARIDWKETPEAHVF 60
MS++R NV DP S+D W R+DWKETP AHVF
Sbjct: 1 MSLVRSGNVLDPMSVDFWADADPFGAVRSLAER-------CPVLTNVRVDWKETPTAHVF 53
Query: 61 KADVPGLXXXXXXXXXXDGNVLQISGERIKEQE---EKTDKWHRVERSSGKFLRRFRLPE 117
AD+PG+ DG VL ISGER +E++ + ++WH VERSSGKF RRFRLP
Sbjct: 54 TADLPGVRKDQAKVEVEDGGVLVISGERAREEDVDGKNDERWHHVERSSGKFQRRFRLPR 113
Query: 118 NTKPEQIKASMENGVLXXXXXXXXXXXXDVKSIQITG 154
+ +Q+ ASM+NGVL +K+I I+G
Sbjct: 114 GARVDQVSASMDNGVLTVTVPKEETKKPQLKAIPISG 150
>Os02g0128000 Similar to Cytosolic class I small heat shock protein 6 (Fragment)
Length = 177
Score = 89.0 bits (219), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 42/87 (48%), Positives = 58/87 (66%)
Query: 47 ARIDWKETPEAHVFKADVPGLXXXXXXXXXXDGNVLQISGERIKEQEEKTDKWHRVERSS 106
A +DWKET AHVF AD+PG+ + VL+ISG+R + EEK ++WHRVERSS
Sbjct: 70 ASMDWKETAAAHVFMADMPGVRREEVRVEVEEEKVLRISGQRARAAEEKGERWHRVERSS 129
Query: 107 GKFLRRFRLPENTKPEQIKASMENGVL 133
+F+R RLP N + + A+++NGVL
Sbjct: 130 ERFVRTVRLPPNANTDGVHAALDNGVL 156
>Os04g0445100 Similar to 22.7 kDa class IV heat shock protein precursor
Length = 215
Score = 85.9 bits (211), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 45/98 (45%), Positives = 58/98 (59%), Gaps = 4/98 (4%)
Query: 40 DAAAFAGARIDWKETPEAHVFKADVPGLXXXXXXXXXXDGNVLQISGER----IKEQEEK 95
D A + AR+DW+ET +AH DVPG+ D VL+ISGER EQ+
Sbjct: 69 DVAMLSMARVDWRETGDAHEVVVDVPGMRKEDLRVEVEDNRVLRISGERRREETTEQKGG 128
Query: 96 TDKWHRVERSSGKFLRRFRLPENTKPEQIKASMENGVL 133
D WHR ERS G+F R+ RLP+N + I AS++NGVL
Sbjct: 129 GDHWHREERSYGRFWRQLRLPDNADLDSIAASLDNGVL 166
>Os06g0253100 HSP20-like chaperone domain containing protein
Length = 146
Score = 72.0 bits (175), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/99 (43%), Positives = 55/99 (55%), Gaps = 6/99 (6%)
Query: 41 AAAFAGARIDWKETPEAHVFKADVPGLXXXXXXXXXXDGNVLQISGERI-----KEQE-E 94
A+A A A +DW ETP +HV + +VPGL DGNVL + G KE+E E
Sbjct: 24 ASASATAAMDWVETPTSHVLRINVPGLGKDDVKVQVEDGNVLTVRGAAPHAAAEKERERE 83
Query: 95 KTDKWHRVERSSGKFLRRFRLPENTKPEQIKASMENGVL 133
K WH ER +F R LP + EQI+AS++NGVL
Sbjct: 84 KDVVWHVAERGRPEFAREVALPAEVRVEQIRASVDNGVL 122
>Os11g0244200 Similar to Pisum sativum 17.9 kDa heat shock protein (hsp17.9)
(Fragment)
Length = 206
Score = 66.2 bits (160), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 56/95 (58%), Gaps = 8/95 (8%)
Query: 47 ARIDWKETPEAHVFKADVPGLXXXXXXXXXXDGN-VLQISGERIKEQEEKTD-------K 98
AR DWKETPEAHV DVPG+ + + VL++SGER + + + +
Sbjct: 72 ARCDWKETPEAHVVTVDVPGVRRGDVRVEVDEASRVLRVSGERRRAGAAEEEEGERDGVR 131
Query: 99 WHRVERSSGKFLRRFRLPENTKPEQIKASMENGVL 133
WHR ER++G+F RRFR+P ++ A +++GVL
Sbjct: 132 WHRAERAAGRFWRRFRMPPGADVGRVAARLDDGVL 166
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.316 0.132 0.389
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 3,634,774
Number of extensions: 110718
Number of successful extensions: 271
Number of sequences better than 1.0e-10: 13
Number of HSP's gapped: 261
Number of HSP's successfully gapped: 13
Length of query: 154
Length of database: 17,035,801
Length adjustment: 92
Effective length of query: 62
Effective length of database: 12,232,113
Effective search space: 758391006
Effective search space used: 758391006
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 151 (62.8 bits)